Xiphophorus couchianus (Monterrey platyfish): 114146800
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Entry
114146800 CDS
T05908
Name
(RefSeq) nectin-4-like isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
114146800
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
114146800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114146800
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Nectin family
114146800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
Ig_2
ig
C2-set_2
LapA_dom
Izumo-Ig
DUF6377
EphA2_TM
He_PIG
stn_TNFRSF12A
Bac_export_2
CHD5
TMEM154
PhoR
Motif
Other DBs
NCBI-GeneID:
114146800
NCBI-ProteinID:
XP_027876970
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Position
6:24011605..24041193
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AA seq
583 aa
AA seq
DB search
MESKAGLLLLLLLLIAECVQGAFVEPLQPNTDLKGFTDSQTRLPCWYQLEEDQRMVQVSW
EKVFPNGTSKQIITAHFTEGIKALESSDRMRFETFNPISESSALLIQVTKVSDAGVYRCH
IATHPQGSFDRTIKLTVWMLPISSVEPENLVEGQAFGLVSTCRAVGYPKPGLSWDTELPG
HSKNHTGEDGKAFIQYWLHPLRSMNGKKLDCLVWHPSLKEPRRIADRLVVQYPPDPIISS
SPSNWQVGLQKAELVCEGRGNPTPQNIIWTWRGGALPDGVSVDGEKLVFGRPVQLNDSGT
YECTVKNAVGSGKTEFTLVISGPPLPPLPNLLLIIVSAVAGALVLLLVIVFLVVKRRHLR
KTKKLKMELQETKEEINSLSRQASFRRLNSAGSISRIQPEDYALLRVDSRTKYSEVSLEP
PHYQGSQSTLGGRWGPTGEVPRDEYGRPVVWTEDRECLRAAEMNREKEERRKRVESFVKN
SNMSLDSGLPSSLVPLKVQQDNGNGHKEPDLCHLQEDDSSPGDDSVVESSTTEEHEEDEG
RRRHYLQGTLSKMFYESNGVLRPRENPNAILLPCQNYCNPQLI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaaggctggacttctgcttctgctgcttcttcttatcgcagaatgcgttcaa
ggggccttcgtggagcctctgcagcccaacaccgacctcaagggcttcactgactcccag
accagactcccctgctggtaccagctggaggaggaccagaggatggtgcaggtctcctgg
gaaaaggtgttcccaaatgggaccagcaagcaaatcatcacggcccacttcactgaaggg
attaaagcgcttgagagctctgaccggatgaggtttgagaccttcaacccgatttctgag
agctcagctctgctcatccaagtcacaaaggtgtcagacgccggcgtctaccggtgccac
atcgccacccaccctcagggaagcttcgacaggaccatcaagctcaccgtgtggatgcta
cccatctcctccgtggaaccggagaacctggtggaaggccaggcgttcggccttgtctcc
acctgtcgcgccgtgggctaccccaaacccgggctgtcctgggacacggagctgcccggc
cactccaagaaccacaccggggaagacgggaaagcgttcatccagtactggctccacccg
ctgcgcagcatgaacggcaagaagctggactgcttggtgtggcatcccagcttgaaggaa
ccccgcaggatcgctgaccgcctggtggtccagtaccccccagatcccatcatctccagt
tctcccagtaactggcaggttggtttgcagaaagccgagctggtgtgcgaaggcagagga
aacccaacaccccagaacatcatctggacttggagaggaggagctttgccagatggggtg
tctgtggatggagaaaagctcgttttcggacggcccgtccagttgaatgacagtgggact
tatgagtgcacggtcaagaacgctgtgggatctggaaaaacagagtttacattggttata
tcagggccgccgcttccgccgctgccaaacctgctgctgattatcgttagcgccgtggcc
ggcgctttggttctgctgctggtcattgtgttcctggtcgtcaaacgccgccatctgaga
aaaaccaaaaagctgaagatggagctccaggaaacaaaggaggaaattaacagtctctca
agacaagcctccttcaggagactgaactcagccggctcaatttcacgaattcagcctgaa
gattatgccttactcagagtagacagccgcactaaatacagcgaagtgtctctggagccc
ccccactaccagggcagccagtccactctgggtgggaggtgggggcccacaggagaggta
ccacgggatgaatacgggcgtcccgtcgtctggaccgaggacagagagtgcctgagagcc
gcagagatgaacagggagaaggaggagcgcaggaaacgggtggagtcgtttgtgaagaac
agcaacatgtcgctggattcaggccttccttcctcgctggttcccctgaaggtccagcag
gacaacggtaacggccataaagagcctgacttgtgtcacctacaggaagacgactcgtcc
ccaggcgacgactcggtcgttgaatcctccacaacggaggaacacgaggaagacgaagga
agaagacggcattatcttcagggaactctcagtaaaatgttttatgaaagcaatggggtc
ctcaggcccagagagaatcccaacgccattctcctgccttgccaaaattattgcaaccca
caacttatctaa
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