Xiphophorus couchianus (Monterrey platyfish): 114149287
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Entry
114149287 CDS
T05908
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114149287
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114149287
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114149287
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114149287
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
114149287
NCBI-ProteinID:
XP_027880808
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All DBs
Position
8:complement(7533827..7586787)
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AA seq
964 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANQVYGRDKFKLNAI
SVTHKANAIQMALSVCEDLIHSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVVILSA
SEDDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIALQLINGKNESAHITD
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYTILNYQKSRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMQDGTCNEEKALNGVIIKKVICTGPNETIPGRPIVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEASGSQAVTGTPSLPSSS
VETQDDRKSGRAEPDPKKKASFRSISTTLASSIKRRRSSKDTQFPPTDATGQLNLSDPSV
STVV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcctctcgtgctcctgcgcgcgggccggctgcgag
cccaagatcgtgaacatcggggccgtcctgagccagaagaggtacgagcaggtgttcaag
gatgccgtgaaccaggccaaccaggtgtacggccgggacaagttcaagctgaacgccatt
tccgtcacgcacaaggccaacgcgatccagatggctctgtcggtgtgcgaggacctgatc
cacagccaggtttacgccatcctggtgagtcaccctcctcagtccagcgaccatctcacc
ccgacgcccgtctcctacacggccggcttctaccgcatcccggtggtggggctcaccacg
cgcatgtccatctactccgacaaaagcatccacctgtccttcctgcggacggtcccgccg
tactcccaccaagctcacgtttggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtcagcgacgaccacgagggccgggcggctcagaagaggctggagacgctg
ctggaggagcgagagacgaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctacagttcagtcaggagacaaac
ttaaccgcgctgctgctggaggctaaagagctggaggcccgagtcgtcatcctgtccgcc
agcgaggacgatgctgccgccgtgtacaaggcggcccgcttcctcaacatgaccggctca
ggctacgtgtggctggtgggggagcgggagatgtccggtaaagctctgagcgaggcgcct
gatggactgatcgccctccagctcatcaatgggaagaacgaatcggcccacatcaccgac
gccgtggcggtggtggcccagtccatccaggagctgtttgagaaggagaacatcacagaa
ccaccgaaaggctgcgtgggcaacaccaacatctggaagacggggccactttttaagcga
gtgctgatgtcgtccaaatatccggagggtctgactggacgcgtcgagttcaacgacgac
ggagacaggaaatacgctcactacaccatcctcaactaccagaagtctcgcctggttcaa
gtcggcatttacaacggcacacaggtggtgatgaacaatcagcgcaagatcatctggcct
ggaggcgagacggagaaaccgcagggcttccagatgtcgacccgattaaagattgtgacg
attcaccaggagccatttgtgtatgtgaaaccgacgatgcaagacgggacctgcaacgag
gaaaaggcattaaatggagtgattataaagaaggttatctgtaccgggcccaacgagacc
atcccagggcgtcccatcgtgccgcagtgctgctacggcttctgtgtcgacctgctgatc
aaactggccatgaccatgaacttcacctacgaggtccacctggtggctgacgggaagttt
ggaacccaagagcgggtgaacaacagcaacaagaaggagtggaacggcatgatgggagag
ctgctgggtgggctggctgacatgattgtggccccgctgaccataaacaacgagcgtgcc
cagtacatagagttctctaaaccctttaaatatcaaggcctcactatcctagtcaaaaag
gaaattcctcgaagtacgctggactcatttatgcagccgttccagagtacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttaccttctagaccggttcagt
ccatttggaagatttaaagtaaacagtgaggaagaagaagaagatgccctcaccttgtca
tctgccatgtggttctcctggggagttttgctgaactctggaattggagaaggtgcaccg
cgcagcttttcagcgagaatccttggcatggtgtgggctggttttgctatgatcattgtg
gcttcttacactgccaacctggctgccttcctggtgctggaccggcctgaggagcgcatc
accggcatcaatgacccaaggctgagaaacccatctgataaattcatctacgccacggtg
aagcaaagctccgtggacatctacttccgacgacaggtggagcttagcactatgtaccgc
cacatggagaaacacaactatgagagtgctgcagaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgagaacatggcaggagtcttcatgctggtggccggaggcatt
gcggcggggatcttcctcatcttcatcgaaatcgcctataaacgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctgcaggac
agtaaggaagcctctggaagtcaagcggtgactgggactccctcgttaccctcttcctct
gtagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaaaagaaagcc
tcttttaggtccatcagtaccaccctggcttccagcatcaagagacgtaggtcctccaaa
gacacgcagttcccacccactgacgccacgggccagctcaacctgtctgacccgtccgtc
agcaccgtggtgtag
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