Xiphophorus couchianus (Monterrey platyfish): 114158468
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Entry
114158468 CDS
T05908
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
114158468 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114158468 (rev3l)
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114158468 (rev3l)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
114158468 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
114158468
NCBI-ProteinID:
XP_027895777
LinkDB
All DBs
Position
15:complement(22124943..22183197)
Genome browser
AA seq
2999 aa
AA seq
DB search
MFAVRIVTADYYLASPIKGLDVCYSEFRESEVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGCRQQPERYMRQVAFSIDRALNVAMGNPAASTQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPQILKRVCELLQSGAVMNKSYQPHEGHISYLLQLFMDYNLYGMNLINMAAV
KFRRSQKKVGPADRDQPSSSSHSSISPWKIPCSTKLSDSSLAGTFVRWEENALPSSLVLD
DVERQSTCELEVDAVAVDILNRLDIENQIGRNPGLQAIWEDEKQRRRENNQTSQIEAPDS
QDRDSVTSTESEKTFMNRLKEILRENKFDVTQDLFVDDEQESLSAELTLHPDLLTPDRVP
CTAANAVETHRDSQPDSVRSSGKVPEEAVIDEEAILSLLENSQTFLPLSQTANNSTLLES
SQDHALIDLLAGLEDDGFHRTPLIHSSQPQSLPGASTYNCNSDEEEAGPELEKEEAELSM
IMSQRWDSEHPGRTNPPRPAVREAEDGFSDEQQESSDEDMEWSGTHSLFLNLSIPQLDGA
ADESSDSSLTDSGSMSQSSLTVTEKLLGKSNPCTGETVHLEPPSSAKILLCKHPEHRPVR
GLDTEEQLKNSFQLKSSPDGSNECSAGFRVNKEITYILPVKHPIPRKIANHTEVPPICMD
KEDIRPLYTYNKKTSKPVEKADLEAFPFSSGKVSKNRKRYSSLETVETNRLSIFQNHSTI
SLCYSDLRACSAKTELELSTKERKSPILRSLTSTPSLMKEGEFIDHKEELAPESEEGDVG
ELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLNRKKTVNKKPADTCSKPELSPT
CKLKLKLPKKRLGMAGHRNKAAAAQSPISDSPVCTGLCSETPACNQTSDTEGPVSEDQPK
PQAEVNEDEPNEEVEPAINEELDNEEKTVSEAVVSNTTITFFLCEEAKDVTEDRLSLDPD
VSVKVSCTKSSALPGSKYTLRAKRKQNFDGTDEDQPGSSRSKNSSKFPRGQETKYQKRRK
KEPPVIIKYIIINRFKGQKNMLVKMSKVNADEQLVVLTADKVEHYNKLAPLKSFWPKVPE
STAIRFPVKEPKAKKSPKRKARVNNAGKKTINISPKKPLVRRGQRMKRITGCQRGPLLPS
LPPPRPCYCELADDFEKEYADVMVELGYLSDRSPSPTESTPPRCWSPSDPFLNSTEQLIN
PLSDPCLSSASLNPCTKSVTKRGQRRSRTAKPKKSTESKRKVNMSAAKPSQVQEPKQVKA
RRGAASAARQRKKASNATESPAISPRPRRSRKKKTDKPKSDDLCKEDSQLLFSDGGFAPS
ESSSQDITSFQQPLGTDITCQSRSSASDTSMATSARFIEPKAEGCETSIMQVNQNMLAPV
EMKQQGCQTTMIKVESCLEYCTAPQPPAETSNDVQKDKGCPPSVPKNGETPVLTETPSGL
AVLKQLLQKRQQGQALPLQVVGTDRHAAAIAQAAVLLNPSAKHTKPIRTPSTAPRKPRVP
KSTAPKEKKPRNRKSRTSSTQPDRSVKQDGSMSDDCPLFSSAPSLASCNFIEDSLSPELP
QDYTFDINTIHQAEFSSPYSGNQFVLTDKNLPVKFLSDICHELPSAQAQGLEGLSQSQTE
RDSDVCKVRPASPELFDRSGNGEPSTNLALLQSEKHRPERQTEWDLSFCKSHTLSPFQDF
HCERKEFLFSAFDPVIPLSLSSVSFVDQEGSPTSELHESIDGLTSTTPSSSPHSISSLSH
VRASQLQRGTGGGAHVLKPLMSPPSRDEILSSLMDLEMSEATFQEPFCSDPSDIPNKPME
VGGRKLTVGTRLVRELQEFGGDLSLEGLHLWKTAFWVMTHPATTITSSQGAEVEQAKEEK
TGLLASSASDKKVVLLPCRNPPSHERVQLWLEARKQYDSLQKERREPGKKREGADVEQEN
PDRTNLPDVSRCISVNVEHYGNTSSVRTRRRKKLSLSLALSPLVDTGPRSNTTTLSPVSD
ESTVSPQPEKQEDASNTVSPESLELPPWQEPHQLSPLAPERLGSKNSPESPSPRLPDSQE
RFGADQSPFPFHGADGNGGSSSPHRLHTTPFLRKRRRSTEDLEPVCSTPISYKDPVSQRR
RSQADPLRRVLLTTQMKNQFAAINVPKKEQSQIEGPSIANSYGFKVSMQNLQDAKALHEV
QYLTLMGMELHARSRRDLEPDPEFDPICALFYCLSSDAPLQGGDGTQLTGAIMVDKDHES
CGQGPRSKAPLLVRSGVSGLQVTYAREEKMLFQELIAIMRRFDPDILLGYEVQMHSWGYL
LQRAAAIGVDLCQQLSRIPGDSKENRFAAERDEYGADTMTEINIIGRVTLNLWRVMKSEV
TLNNYSFENVAFHVLHQRFPLYSPRTLSDWFDHITHLHRWKMVDHYVSRLHGTMQLLQQQ
DIIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSVQQRAQQRAPQC
IPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDSLGTPDEFKFGCTSLR
VPPELLHQLRNDITVSPSGIAFIKSSVRKGVLPSMLEEILSTRIMVKQSMKSYRQDKALM
RLLDARQLGLKLIANVTFGYTSANYSGRMPSVEVGDSIVHKARETLERAIKLVNDTKKWG
ARVVYGDTDSMFVLLKGATKEQAFKIGHEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKR
YVGYMYESLDQKEPVFDAKGIETVRRDGCPAVSKILERSIKLLFETRDISQVKQFVQRQC
VKVLDGRASMQDLTFAKEYRGSGSYRPGACVPALELTRRMMAYDRRLEPRVGERVPYVIV
YGMPGVPLIQLVRRPMEVLLDPSLRLNATYYITKQILPPLGRLFQLIGVDVFGWYQELPR
IQKASCSSAVGGEEPAGRKGTISQYFTTLHCPVCDELTQLGVCAQCRADPQRVAVTLYQD
VRQWESQQEQLLKICRNCSSCTERHVPCVSLDCPVLYKLSRVNRQLSKAPYLRQLLEQF
NT seq
9000 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagtgcgcatagtcaccgcagactactatctcgcaagtcccattaaaggcctg
gacgtgtgttattctgaattcagggagagtgaggtgaagaaggtaccggtggtgcggata
tttggagcaacgcctgcaggtcagaagacatgtctccaccttcacggtgtgttcccatac
atctatgtgccatatgatggctgtagacagcagccggagcgctacatgcgacaggtggcc
ttcagcatcgacagggccctcaacgttgccatgggaaacccagccgccagcacccagcac
gtcttcaaggtggtgctggtctctggcatgcctttctatggttatcatgccaaggagaag
cactttatgaagatctacttgtacaatcctcagatactgaaaagagtgtgtgagctatta
caaagtggagcggtgatgaataagagttaccagcctcacgagggccacatttcctacctg
ctgcagctcttcatggactacaacctgtatggcatgaacctgataaacatggcagcagtg
aagttccgcaggagccagaagaaagtgggccctgcagaccgggaccagccgtcctccagc
tctcactccagcatcagtccctggaagattccctgcagcaccaagctgagcgacagcagc
ctcgcaggcacctttgtccgctgggaagagaacgctctgccctcctcattagtcctggat
gacgttgagaggcagagcacctgtgagctagaggtggatgctgtggccgtggacatcctg
aaccgtcttgatattgaaaatcagattggcaggaaccctggactgcaggctatttgggag
gatgagaagcagaggaggagagagaacaaccagacctcccagatagaagcgccggattca
caagatcgggactcggtcacttcaacagagagtgaaaaaaccttcatgaacagactgaag
gagattctgagggagaacaagtttgatgtgacccaagatttgtttgtggatgatgaacag
gagagtttgtcagctgaactcactctgcaccctgacctcctgacccctgaccgggtgccg
tgtacagctgctaacgctgtggagacgcacagagactcccagccagactcagtgaggagc
agtgggaaagtcccagaggaagctgtcattgatgaagaagccatcttaagtcttctggaa
aacagccagacgtttctgccactctcacaaacggccaacaactccaccctattagaaagc
agccaggatcacgccctcattgatttgctggctggcctggaagacgatggtttccacagg
actccactaatacacagctctcagcctcagtcgctccccggtgcatcaacctacaactgc
aacagtgatgaagaagaagccggacccgaactggaaaaagaagaggcggagcttagtatg
ataatgtcacagcggtgggacagcgaacatcctgggagaacaaacccaccgaggcctgcg
gtcagggaggcagaggacggcttcagcgacgagcagcaggagtcctctgacgaagacatg
gagtggagtgggactcactctctgtttcttaatctgtccatcccacagctggacggggca
gcagacgaaagcagtgattcttctttaacagacagtggttccatgtctcagtcttcgctt
acagtcacagagaagctgttggggaaatcaaatccctgcactggagagactgtccacctg
gagccgccatcgtcagctaagatcttgctgtgcaagcatcctgagcacaggccagtccgt
gggctggacacggaggaacaactcaaaaactcctttcagttaaaaagcagcccggacggc
tccaatgaatgttcagcagggttcagggttaataaagaaatcacatacatcctgccagtg
aagcacccaattcctcgcaaaatagccaatcacactgaggtgcctcctatctgcatggac
aaggaggacattcgaccgttgtacacgtataacaagaaaacctccaaacctgtggagaag
gctgatctggaagccttcccttttagcagtggaaaagtgtcaaaaaataggaaaaggtac
agcagccttgaaactgtagaaactaaccgtttatccatctttcagaaccacagcaccatc
tccctttgttactcagacctcagagcctgctctgctaagacagagctagagctgagcacc
aaggagagaaaaagcccaattctgaggagtctcacctcaacgccgtccctcatgaaggag
ggcgagttcatcgaccacaaagaagaactggccccggagagtgaggaaggagatgttggg
gagctcaaaattagatatgaagactaccaggaaaataaaactgagagaactattgtggcc
caacaggaggcacattacaagttcttccccagtgttattctctccaactgtctcaataga
aagaagactgtaaataaaaagccagctgacacctgcagcaagccagagctgtccccgact
tgcaagttgaagctgaaacttcctaaaaaaaggttaggaatggcaggacataggaacaaa
gcagcagcagctcagagcccgatttctgacagtccagtttgcactggcctctgttcagaa
acacctgcttgtaaccagacttcagacacagaggggccagtttcagaggatcaaccaaaa
ccacaggctgaggtaaatgaagacgagccaaatgaagaagttgagccagctataaatgaa
gagttggacaatgaggaaaagacagtctcagaggctgttgtctccaacaccaccattact
ttctttctttgtgaagaagccaaagatgtaacagaggatcggttgagccttgacccagat
gtatctgtaaaagttagctgtactaaatcatcagcactgccggggagtaaatacacacta
agggctaaacggaagcagaactttgatggtactgatgaagaccagccaggttccagtcgt
tctaaaaactccagcaagtttcccaggggccaggagaccaaataccagaaaagacgcaag
aaagaacctcccgtaattatcaagtacatcataatcaacaggttcaaaggtcagaaaaac
atgttggtgaagatgtccaaagtgaatgcagacgaacagctggtcgtgttaactgcagat
aaagtggaacattacaataaactggctcctctcaagagcttctggcctaaagtgccagag
tccactgccatcaggtttcccgtcaaagagcccaaagctaaaaaatcgcccaagcgaaaa
gccagggtcaacaacgcaggcaagaagacgatcaacatctctcccaaaaagcctctcgtc
agacgagggcaaaggatgaaaaggatcacaggctgtcagagaggcccacttctgccctct
ctgcccccccctcggccatgttactgtgagctagcagatgactttgagaaagagtacgcc
gatgtcatggtagaactgggctatctttctgatagatccccaagcccaacagaatcaacg
cccccacgttgttggtccccaagtgacccttttctaaacagtacagaacagctgataaat
ccactcagtgatccttgccttagctctgcatcactaaatccatgcacaaagtctgtgact
aaaagaggccaaaggagaagtcgaacagccaaacctaagaagtccacagagtctaaaaga
aaagtaaacatgtctgctgctaagccctcacaggtacaagagcccaaacaggtgaaagca
aggagaggtgctgctagtgctgcaaggcaaagaaagaaagctagcaatgcaactgaaagt
cctgcaatatctccacgacctagaaggtcccgcaaaaagaaaaccgacaaacctaaaagt
gatgatttatgcaaagaagactcccagctgcttttctctgatggcgggttcgctccatca
gagagttcctctcaagacatcacctcctttcagcagccgctaggcaccgatatcacctgt
cagagcaggtcttcggcttcagacacatcgatggccacctcagctcgctttattgaacca
aaggctgagggctgtgagacctcaatcatgcaagttaaccaaaacatgctggcacctgtt
gagatgaagcagcagggttgtcagaccactatgataaaggtagaatcttgtctagaatat
tgcactgcccctcagccgccagcagagacaagtaatgatgtccagaaagacaaaggttgt
cccccttcagttcctaaaaacggagagacaccagttctcactgagaccccgtctggcttg
gctgtccttaagcagctcctccagaagaggcagcagggacaggcccttcctctacaagta
gttggaacagacagacatgccgctgccatagctcaggccgcagtgctgctaaacccctcc
gctaaacacactaagcccattagaactccttccactgcccctcggaaaccccgggtccca
aagtctaccgctcctaaggagaagaagcccagaaaccggaaaagcaggaccagtagtact
cagccagaccgatcagtgaagcaggacggcagcatgtctgatgactgccctctcttctcc
tctgcaccgagcctcgccagctgcaacttcatagaggacagcttgtccccagagctccca
caggactacaccttcgatataaacactattcaccaagcagagttctccagtccctacagc
ggcaatcagtttgttttgactgataaaaacctacctgtcaagttcctcagtgacatctgc
catgaacttccatctgctcaggcgcagggcttggaaggtctgtctcagagccagaccgag
agagactctgatgtgtgcaaagtcaggcctgccagccctgaactctttgacaggtctgga
aatggagagccctcaacaaaccttgctctgcttcaatctgagaagcacagaccagaaaga
caaacagagtgggacctttctttctgtaaatcccataccctcagcccttttcaagacttc
cactgtgagagaaaggagttcctcttctcagccttcgaccccgtcatacctttgtctcta
agctcggtgtcgttcgtcgaccaggaaggctcacctactagcgaacttcacgagagcatc
gacggacttacgtccaccacacccagcagctcccctcactcaatcagttctctgtcacat
gtgagagcaagccagcttcagcggggcaccggaggtggagcccatgtcctcaagcccctc
atgtcccccccgagtcgggatgagatcctcagcagtctgatggacctggagatgtcagaa
gccacgttccaggagcccttctgcagcgatccctctgacatcccaaacaagccaatggag
gttgggggccgtaagctcaccgtgggaaccagattagtgagggaactccaagagtttgga
ggagacctgtctttggagggcctccatttatggaagaccgccttctgggtcatgacgcac
cccgccaccaccataacctcctctcagggagcggaggttgagcaggcaaaagaagaaaag
acggggcttctcgcatcctcagccagcgacaagaaggtcgtccttctgccctgcaggaac
ccgccgagccacgagcgcgtgcagctgtggctggaagccaggaagcagtacgacagcctg
cagaaagagaggagggagccggggaagaagcgggagggggcagatgtggagcaggaaaac
cctgacagaaccaacctgccagatgtttccagatgcatttcagttaacgttgaacactat
gggaacacttccagtgtgagaactcgcaggagaaagaagctcagcctgtccttagccttg
tctcctctggtggacaccggccctcggtccaacaccacaacactgagtccggtttcagat
gagagcactgtgagccctcagcctgagaaacaggaggacgcctccaacacggtgtctcca
gaatccctagagctgcctccgtggcaggagcctcaccagctgagcccattggcgcctgag
cgactcggcagcaagaactcaccagagtcaccatcacccaggctccccgattcacaggag
agattcggagcagaccagtctccctttcctttccatggtgcagacgggaacggtggcagc
agcagtccacaccgcctacacaccacccccttcttaaggaaaaggcggaggagcacggaa
gatctggaaccagtctgcagcacgcccataagttacaaggatcctgtttctcagagaaga
agaagccaggccgatcctttgaggagagtattactgaccacacaaatgaagaaccagttt
gctgctataaatgtgccaaagaaagaacagtctcagattgaagggccaagtatcgccaac
tcgtatggcttcaaggtcagcatgcagaatctgcaggatgccaaagctctgcatgaggtc
cagtaccttactttaatgggaatggagctccatgctagaagccgccgggacctggaacct
gacccggagtttgacccaatatgtgccttattctactgcttgagctccgacgcgcccctg
cagggcggagacggcactcagctgacaggtgccatcatggtggacaaagaccatgaaagc
tgtggtcaaggtcccagatcgaaggcaccgctgctggtcaggtcaggagtctctgggcta
caagttacctacgccagggaggagaagatgctgtttcaggagctcatcgccatcatgaga
aggtttgacccagacatcctgctgggatacgaggtgcagatgcattcatggggctacctt
cttcaacgcgccgctgcaataggagtggacctctgccagcagctgtcacggattccaggt
gactccaaggagaaccgcttcgccgccgagagggatgagtacggagccgacaccatgact
gagatcaacatcatcggccgcgtcaccctcaacctgtggagggtgatgaagagcgaggtc
acgctgaacaactacagctttgagaacgtggccttccacgtgctccatcagcgcttcccc
ctctacagcccccgcacgctgtccgactggttcgaccacatcacgcacttgcacaggtgg
aaaatggtggatcattatgtgagtcgtttacacggcaccatgcagctgctgcagcagcag
gacatcattggcagaaccagcgagctggcccggctctttggaatccagttcctccatgtt
ttgactcgaggatctcagtaccgtgttgagtccatgatgctccgtgtggccaagcccctg
aactacatcccggtgacgcccagcgtgcagcagcgagcccagcagagggcgccgcagtgc
attcccttggtgatggagcccgagtcccgattctacagcaactctgtggtggtgctggac
ttccagtcgctgtacccctccatcgtcatcgcatacaactactgcttctccacatgcctc
ggccacgtggacagcctgggaacaccggatgaatttaagtttggctgcacctccctgcgg
gttcctcctgagctcctccaccagctccgtaatgacatcaccgtgtccccgagcggcatc
gccttcataaagtcgtcggtgcgtaaaggcgtccttcctagcatgctggaggagatcctg
agcaccaggatcatggtgaagcagtccatgaaaagctacaggcaggacaaggccctgatg
aggttgctggacgcccggcagcttggactcaagctcatcgccaacgtcacctttggctac
acctcagcaaactactcaggacgcatgcccagcgtggaggtgggagacagcattgtccac
aaagccagggagaccctggagagagccatcaagctggtcaacgacaccaagaagtgggga
gcccgagtcgtgtatggagacacagacagcatgtttgttctgctgaaaggagccaccaag
gagcaggccttcaagatcggccatgagatcgcagaggccgtgaccgcgaccaaccccaaa
cctgtcaagctcaagtttgagaaggtgtatttgccctgcgtgctgcagacaaagaagcgc
tacgtgggctacatgtacgagagcctggaccaaaaagaacccgtgtttgatgccaaaggg
atagaaacggtgcgtcgcgacggatgccccgctgtttccaagattctggagcgctccatt
aagctactgtttgagacacgggacatcagtcaggtgaagcagtttgtccagcgtcagtgt
gtgaaggttctggacggccgggctagcatgcaggacctaacttttgccaaggagtaccga
ggcagcggctcgtaccggcccggagcctgcgtgcctgccctggagctcaccaggcggatg
atggcatacgaccggcgcctggagcctcgcgtgggcgagagagtcccctatgtgatcgtg
tatgggatgcccggcgtgcccctcatccagctagtgcgccggcccatggaagtgctgctg
gaccccagcctgcgcctcaacgccacctactacatcaccaagcagatcctgccgccgctg
ggccgcttgttccagctcatcggagtggacgtgtttggatggtaccaggagctccccaga
atccagaaagcgtcctgctcctctgcggtagggggcgaggagcccgctgggaggaaggga
accatttctcagtatttcaccacgctccactgccctgtgtgtgacgagctgacccagcta
ggggtgtgcgcgcagtgcagagccgacccccagcgggtggctgtgaccctgtaccaggac
gtgaggcagtgggagagccagcaggagcagttgctcaagatctgcaggaactgcagcagc
tgtactgagcgacatgttccatgtgtgtccctggactgtccagtcctctacaagctgtcc
cgggtcaacaggcagctctccaaggccccatacctccgacagctgctggagcagttctga
DBGET
integrated database retrieval system
