Xiphophorus couchianus (Monterrey platyfish): 114159420
Help
Entry
114159420 CDS
T05908
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114159420
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114159420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114159420
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114159420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
114159420
NCBI-ProteinID:
XP_027897187
LinkDB
All DBs
Position
16:complement(1714515..1768132)
Genome browser
AA seq
1411 aa
AA seq
DB search
MGLRLGSWSDSLWWPPPLPLLLLLFCTTPSSLGRPFGFPVPSVNVAVVFSGPAYQTEIKG
RLSRENFMDLPLEVNPITVLVNNTNPRALLTRICDTLSTNRVHGVVFEDNVGSEAVAQIL
DFISTQTAVPIVGISGGSAVVLPYKGEGSNFLQLGSSIEQQINGMFKVMEEYNWDSFVVI
TSLYPGYEAYVDYIKSFTDTSYFMWDLQDVLSFDMSADSTNDIRARRLLQQIDAQVLLVY
CSHEEAQYLFSLATEVGLIGPGYIWIIPSMAVGNPDIPPPDSFPLGLISIITDRWRMSLR
KRVRDGVAIVVKGVQSFRKQRGFIPEGHSDCHNPVKQSAINDTLFRHMLNVTWEHNDFSF
NSNGYLVNPAMIVITLDRERQWDKVGTYEMGILQMRYPVWPRFGSYLEPVSDYRHLTVAT
LEERPFVIVEAVDPVTGTCVSNTVPCRRQSNKTEAIVGHTEPYTKLCCKGFCIDILKKLS
RTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYCSPVGYNRSL
VSAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGTVPNGSTERNIRSNYPEMHSHMVKY
NQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKD
SRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSVRKSDRLDFLLAISRGIYSCFNGVEQSDRNGSLQSPDVTT
NYTQANMLKMLRTAKDMVSSARVENSLDSATKTIENWSRRGADNVRAGLPPRVTTTDVTH
GRLPYISSITDNHSPYPQRAITPTFPVHYGDTSTQPLLEKPRVVTRPTPLRYTLPTRSSQ
HLLERTLPISSLSSPHIAMRDPTPSGTSNPHHSSRLYVENQGRHPASPFVSYREFQVPDI
YVEHKGPLRRKFSYPPDCVSRRRRSFSYLFNNPEPRVRVDYDEPRSCFAELRANHLQAPD
GMAMACTPGHYPASSTSCNSCMKSYLEPEMDDIPLLGKDKLNRRASFLKATWGNDRIHQV
DETKPSTSTAPSTRTDMPDLFPQVVGPNPKPHKLYGSLGHNLSCYPLAAEPAYLDPAHMG
SYPYKQKIKYADSTRLPSYREAILQNAAALRRSSSTVVHRHYSTYLNSYTDLPVYVGPLP
QGPSQFYNSSKNMCHLFPCTSHCPENTAMLPRMTDRPVVYHNNMFGPYDGPKREDLGSGS
RDRRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgggccttcgtctgggcagttggagtgactccctgtggtggccgccacccctgccgctg
ttgctgctgctgttctgcacaaccccctcctctttgggtcggcccttcgggttccccgtg
ccctccgtgaacgtagcggtggtgttcagcggcccggcctaccagacggagataaagggc
cgtttgagccgggaaaacttcatggacctgccgctggaggtgaaccccatcactgtgctg
gtcaacaacactaacccacgcgctctgctcacccggatctgcgacaccctgtcaactaac
cgggtccacggcgtggtgtttgaggacaatgttggctctgaggctgtggcacagattctg
gacttcatctccacacaaacagctgtgcccattgtgggtatcagcggtggctctgcagtg
gtcctgccatacaagggtgaaggttccaacttcctccaactgggttcctccatcgagcag
cagattaacggcatgttcaaggtgatggaggagtacaactgggacagctttgtggtcata
accagcctgtacccgggttacgaagcctacgtggattatatcaagtccttcacagacacc
agctacttcatgtgggacctgcaagacgtgttgtccttcgacatgtcggctgacagcacc
aatgacatacgagcccggaggctgctgcagcagattgatgcccaggtcctgttggtctac
tgctcccacgaagaggcacagtaccttttttcattagcaaccgaagttggactaatagga
ccgggctacatctggattatccccagcatggccgtgggaaacccagacatcccgccacct
gacagcttcccactggggttgattagcatcatcacagaccgctggaggatgagtctgagg
aagagggtgcgggatggggtagccattgtggttaaaggtgtccagagcttcaggaagcag
agaggcttcatccctgagggccacagcgactgtcacaaccccgtcaaacaatctgccatc
aacgacacgttgttcagacacatgttgaatgtaacatgggagcacaatgatttctccttc
aacagtaatggctacctggtgaacccagccatgatagtcatcactctggacagagagaga
cagtgggacaaggtggggacgtatgagatgggaatcctgcagatgagatacccggtgtgg
ccgcggtttggctcctacctagagccggtgtcagattacagacacctgactgtggctaca
ctggaggagcggccctttgttattgtggaggcagtggaccctgtgactggtacttgtgtt
agcaacactgtaccctgccgacgacagtccaacaagacagaggctattgtgggtcacact
gagccatacaccaagctgtgctgtaaaggtttctgcatagacattctgaagaaactctca
cgcaccatcaagttctcctacgacctttacctggtcaccaacggcaagcacggcaagctg
gtcagaggcatctggaacgggatgattggagaggtgttctacaaacgagcagacatggct
atcggctcactgaccataaacgaagagcgttcagagatcattgatttttcggtgccattt
gttgagacgggaataagtgtgatggtggctagaagtaacgggacagtctctccatcagct
ttcttagaaccatacagtccagcagtctgggtcatgatgttcgtcatgtgtctgacagtt
gtggccatcacagtattcgtctttgaatactgcagtccagttgggtataaccgcagcttg
gtcagtgccaaagatcccggaggtcccacattcactattggaaaatcagtttggctactg
tggggaatcgtcttcaacaattcggttcctattgagaatccaaagggcaccaccagtaag
atcatggttctggtctgggctttctttgctgtcatcttcctggcttcctacacagccaat
ctggctgcctttatgatccaggagcaatacatcgacaccgtttccggactgagtgacaaa
aagtttcaaaagccacaggagcagtatcctccgttccgctttggtaccgtcccaaatggc
agcacagagcgcaacataaggagtaactaccccgagatgcactcccacatggtcaaatac
aaccaaaaaggagtagaggatgctctcaacagccttaaaacagggaaactggatgccttt
atttatgatgctgctgtgctgaattacatggctggcaaagatgaaggatgcaaactggta
accattggcagcgggaaagtgtttgctactactggttatggaattgcactgcagaaggat
tctcgctggaaacgccccatcgacctggccctgctgcagttcctggctgatggtgatacc
caaaagttgcaaaccgtctggctcacaggtatctgtcgtaacgaaaagaaagaagtcatg
agcagtaagctggacatcgacaacatggccggagttttttacatgctgcttgtcgccatg
ggcctaagcctactggtgtttgcctgggaacatctgctctactggaaacttcgccattca
gttcgcaaatcagaccgactggactttctcctggctatcagtagaggcatctacagctgc
tttaacggagtagagcaaagtgaccgcaatgggagcctgcagagtccagacgtcaccacc
aactacactcaagccaacatgcttaagatgctgaggacagccaaggacatggtgtcatct
gctagagttgagaactctcttgatagtgccaccaaaacaatagaaaactggagcagacgt
ggagccgacaatgtgcgagctggcctgcctcccagagttacaaccacagatgtgacccac
ggccggctaccctatatctccagtataacagacaatcattccccctaccctcagagggcc
attacaccaacgttcccagttcattacggggacacatccacccagccccttctagagaag
cccagggtggtaacccgacccactccacttcggtacacgctgcctacacgcagcagtcag
catctgttggagagaactttgcccatttccagcctcagcagcccacacatcgccatgaga
gatccaactccctctggaacgtccaatccccaccacagtagcaggctgtatgtggaaaac
cagggccgacacccagcatccccttttgtttcctacagggagttccaggtacccgacatt
tacgtggagcacaagggacccctccgcaggaagttcagctaccccccagactgtgtaagt
cggagacggaggtctttcagctatctgtttaataatccagagccaagagtgagagtcgac
tacgatgaaccacggtcttgctttgctgagttgagagccaatcacctccaggcccctgat
ggtatggccatggcctgcactccaggacactaccccgccagcagcaccagctgcaactcc
tgcatgaagtcttacctggagccagaaatggacgacatccccctcttaggaaaggacaag
ttaaatcgacgagcctcatttcttaaagccacgtggggcaacgatagaatccatcaggta
gatgaaacaaagccttccacatccacagctccctccacccgaacagacatgcccgatttg
tttccacaggtggtggggccgaatccaaagcctcacaagctgtacggcagtttggggcac
aacctgtcctgttatcccctggccgccgagccagcctacttagacccagcccatatgggt
tcttacccctacaagcaaaagataaagtacgctgactctacccggctgccctcttacagg
gaagctatcctgcagaacgccgctgcactgcgccgctcctcctctacggtggtgcacaga
cattattccacctacctgaactcgtacacagatttaccagtgtatgtggggcctctccca
caaggaccgtcccagttctacaacagctcaaagaacatgtgccacttgtttccgtgtacc
agccactgcccagaaaacacagcaatgctccctagaatgacggacagaccagtggtttac
cacaacaacatgtttgggccttatgatggcccaaagcgagaggacttgggttcagggagc
cgagatcggaggcaagtccttgtggcgcgaagagtcaacagtccctatgtgccaaagccc
tggggcagggtctccagtctggagtctgaggtctga
DBGET
integrated database retrieval system
