Xiphophorus couchianus (Monterrey platyfish): 114159893
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Entry
114159893 CDS
T05908
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114159893
04020 Calcium signaling pathway
114159893
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114159893
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114159893
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
114159893
NCBI-ProteinID:
XP_027897942
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All DBs
Position
16:16701755..16834617
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AA seq
2503 aa
AA seq
DB search
MTDGEGRVRFQYEACQEQGEVQEDVRLSVSAGHRTDAPDHNGDPEGQRGGGGREEEQKQQ
EEEKEEAVEKKRRGSCGGRGERRDEWSVEVQECEEEQEPELEMEAGPTLGVRITAPIHDP
DCVSEEEEQQPYPALAPVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMF
QPCEDVNCQSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVM
AGVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLGEDIISLYNQSIHSYYMSEEGEDSPFICSAPRENGMLR
CRDVPPFTQGGEDCSLPAPHQSSALIGSPPGVGGSSNSNCVNWNQYYNVCRPGEHNPHKG
AVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV
IATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFRRRLQR
MYYGWHSKRRKKVNPNGSGIGSNSGGNGHGQGSSRGSGPGTALWLRPIHNLLQHHQHQHC
HLSNGGQHTVNATIAEHMDQEGHAEGVEVLEMKTLSVPRGSTNGSGGENPAVISQGMGAL
LGRLNGGMNYPTILPSFVCSYSSKTPPPHSKHVCPEQHPMNHPASEHTEPLNKLYQLMGQ
HSCQRLLIQLAGVVPSPLLLELLSCPLCARSLETLELELGDLEGGKGEADGIRDFQQGGD
LRGFRSLFRRRGVVACRNGAVQAWINFREKLRRIVESKYFNRGIMIAILVNTLSMGIEYH
EQPDELTHVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQ
ADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMH
LFGCKFSQRMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYF
VALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFDEDDKVEQLRDTELKMY
SLMMTANGHIDPRGTMAPPIIMHTAATPMPTPKSSLGPESILEEELMYREGITQHGEAGL
GVSETGSVRAESQRGSSASMDPAAYDQHSLTLSSPGRRSPLPLRGSISSWGSRRSSWNSL
GRAPSLKRRDTSGERESLLSGEGGEEEECQEQQEEAGVNSRVKLESLEPLQASSLCPTII
AEYGDCNGRTVTYDPNGNSDPKVDFTSDDDLDEDSPFSCWVRRELHNMKPRWCKEHESWT
LYLFAPESPVRVWCQAVITHKLFDHVVLVFIFLNCITIALERPDILPHSPERVFLSVSNY
IFTVIFLAEMAIKVVALGFCFGNQTYLQSSWNVLDGVLVFVSLVDILVSLAYTGTNRILG
ILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFK
GKFYHCEGLDTKNVTNRSDCELANYKWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDG
LDAVGVNQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLR
EEKRLKMIDKKRRSKENGGAEAKQRPYYADYSPLRLTIHTLCTSHYLDLFITFIICINVF
TMSIEHYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGFHRFFKDRWNQLDVGIVALS
ILGITLEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNL
GLLFMLLFFIYAALGVELFGKLECSDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNG
IMKDTLRDCQPDEVHCLSYLPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKE
DAEMDAEIALEMEVERQRRQSTGSNNSSVGGTYIGPCPNSPEEEEEQQYNDQNLLSSGKM
SVSRMHSLPNDSYMFQPVRPASAPYPTKEVDASSQHQHAVSVMSVQSQPCESRSLLQVPD
ASPLHPQSTPTLTLPRIAPPTPGPSPQALHRQGAVKVDAVEFQNCEQQERSSSAHLPPRS
PLSLSPLPPFPPSPSALSFHPCTPSPSSLPPSPSSLLPLPSPPSFLLPPPPSPRLPSRSS
SLRRPRAPSTISLSDPADAEVYHITSSACHRWRDAEGGEQENRRKAGRSHSLSPYASPHS
LDLIPTLPPPSNRSTLSLHGAGSKDVKKGFSVDHHGFLEKPQLELVDHSDDQRRHSIEVC
LPQAVITTDSQNFMLETHRSEKGAQAFPMRVQSVGGRQRKKKTSPPCISIHPPTEREHRL
LSSPPKLADCSMTLRRRTSSNDFTQHSQDTPTETQLRAHMQTPLTPIPAPLRPHSPTHTL
TPSQGSTPTHAQAHTPSPAHIPISPNIFIQPHAPLLPTVMPFSQTVSRHSPLAGDCIPLS
RFTFDQPQSRYVGEPESVACSSPFDNRLGSSPGFSAKNRRTAQ
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaagggagagtgcgctttcagtacgaagcgtgccaggagcagggcgag
gtacaggaggacgtgaggctttctgtatcggcgggccacaggaccgacgccccagatcac
aatggtgacccagaaggacaaagaggaggaggaggccgggaagaggagcagaagcagcag
gaggaagagaaggaggaggcggtggagaagaagaggagagggagctgtggcggtcgagga
gaaaggagagacgagtggagcgtcgaagttcaggaatgtgaggaggagcaggagccagag
ctggaaatggaagctgggcctacgctgggagtccgcatcacagctccaatccacgaccca
gactgcgtgtccgaggaggaggagcagcagccgtatccggccctggctcctgtggccttc
ttctgcctgaagcaaacaacaaggccccgcaactggtgtcttcgcatggtctgtaacccg
tggttcgagcacgtgtccatgctggtgatcctgttaaactgtgtgactctggggatgttt
cagccctgcgaggatgttaactgccagtcagagtggtgccgcatcctacaggtgttggac
gattgcatctttgccttctttgcggtggagatggtcatcaagatggtggcccttggaatt
tttggccccaattgttacctcggcgacaagtggaaccagctcgactttgttattgtcatg
gcaggggtgatggagtattctctggatggccacaatgccagtctgtcagccatccgtact
gttcgagtgcttaggccactgcgggcgatcaacagagtaccaagtatgaggatcttggtg
acgctgcttctggacaccttacccatgctaggaaatgtgctccttctctgcttctttgtc
ttttttatcttcggcattgtgggagtccagctgtgggccggactgctgcgtaaccgctgc
ttcctgggagaagacataatatcactttacaaccagtccattcattcttactacatgtct
gaggaaggtgaagacagcccgttcatctgctcagctccccgagagaacgggatgctgcgc
tgccgtgacgtgccgcccttcacccagggaggagaggattgctcacttcctgctccccac
caaagttctgctctgattggttcaccacctggagtgggcgggtcaagcaatagcaactgt
gttaactggaaccagtattacaacgtctgccgccctggggaacacaacccccacaaggga
gcagttaactttgacaacataggctatgcttggatagccatattccaggtcatcacactg
gaaggatgggtggacatcatgtattatgtcatggatgcccactccttctacaattttata
tattttatactgctcattattgtgggctctttcttcatgatcaatttgtgcctcgtggtc
atcgccacccagttttctgagacaaagcaaagagaaaacgccctgatgagggagcagcgt
gctcgctacatgtcgaatgactcaactctggccagttacagtgagccaggctcgtgctat
gaggagatgctacgatatattagtcatctatacaggaagttcaggcgcaggctgcagaga
atgtactatggatggcacagcaaacgacgcaaaaaggtgaaccctaacggcagtgggatt
ggcagcaacagtggtggaaatggacatggccaaggttccagcaggggatcgggacctggc
actgcactgtggctgaggccaattcataacctcctgcagcaccatcagcaccaacactgt
cacctcagtaacggtgggcagcacacagtgaacgctacaattgctgagcacatggaccag
gaaggccatgctgaaggagtggaagtgctggagatgaagaccctttctgttccgagggga
agtacaaacggaagcggcggcgagaatcctgccgtcatctctcagggaatgggagcactg
ctcgggcgactgaatgggggcatgaattatcccaccattctgccatcttttgtgtgcagc
tacagcagtaaaacaccacctccccactcgaagcatgtgtgtccggagcaacacccaatg
aaccacccggcgtctgagcacaccgagccgctgaacaagctttaccagctcatggggcag
cacagttgccaaaggctgttgatccaactggcaggcgtcgtgcccagccctttgcttttg
gagctacttagctgccctctgtgtgcccgcagccttgagaccctggaactggaactagga
gacctggaggggggcaaaggagaggctgatggaatccgtgactttcagcaggggggcgat
ctacgaggattcagaagtctgttccgacggcggggggttgttgcatgcagaaacggagct
gtccaggcctggataaacttcagggaaaaattgagaagaatagtggaaagtaaatacttc
aaccgggggattatgatcgccatcctcgtcaataccctcagcatgggaatagagtaccat
gaacaacccgatgaattgactcatgtgttggagattagcaacattgttttcaccagcatg
tttgtgctggagatgggcttcatgctgctggcttttgggttgtttggatacatcagaaac
ccttacaacatctttgacagcatcatcgtcatcataagtgtgtgggagataataggtcaa
gcggatggagggttgtcggtcctgcggacatttcgcctgctgcgagtcctgaagctcgta
cggtttctacctgccctgaggaggcagctagtggtgctgatgaagaccatggacaatgtg
gccaccttctgcatgctgctgatgcttttcatcttcactttcagtatacttggcatgcat
ctgttcggatgtaaattcagtcaaagaatggagaacggagacaccattcctgatcgcaaa
aactttgactcgcttctctgggccattgtcactgtattccagatccttacccaggaggac
tggaacgtggtgctgtacaacggcatggcttctacctctccatgggcggctctctacttt
gttgctctcatgacgtttggcaattatgtgctcttcaatttattggtcgccatcttggtc
gaaggcttccaggctgagggagatgccaatcgatcagagtcagacgatgaaaagaaatct
gataattttgatgaggacgacaaagttgaacaactcagagacacagagcttaagatgtac
tctctgatgatgacagccaatggtcacattgaccctcgtggcactatggctcctcccata
ataatgcacacagctgccacgcccatgccaacgccgaagagctccctagggcctgagtcc
atcttagaggaggagctcatgtacagagaagggataactcaacatggagaagctggactg
ggtgtttcagagacagggagtgtccgtgcggagtctcagcgtggaagctcagcatccatg
gacccagcagcctatgaccagcattctttaactctctcaagccctggacggcgctcacct
ctccctctccgtggttccatcagctcatggggaagtcgccgctccagctggaacagtcta
gggagagcaccgagcctcaaaaggcgagacaccagcggagagagggaaagtttactgtct
ggagaaggcggtgaggaggaagagtgccaagaacaacaagaggaagctggggtaaacagc
agagtaaagctggaatccttggaaccgctgcaggcatcttctctctgccctaccattata
gcagagtatggcgactgcaatgggaggaccgtcacatatgacccaaatggaaactcggac
cccaaagttgacttcacatcagatgatgacttagatgaagatagtcctttctcctgctgg
gtcaggagggagctccacaacatgaagccccgctggtgtaaggaacacgagagctggacg
ctctatttgtttgcaccggagagcccagtccgtgtgtggtgccaagctgtgatcactcac
aaattgttcgaccatgtggttctggttttcatcttcctcaactgcatcactatcgctctg
gagaggcctgacatacttcctcacagcccggagcgagtatttctaagtgtgtccaactat
attttcactgtgatcttcctagcagagatggccatcaaggttgttgctcttggtttctgc
tttggaaatcaaacctaccttcagtccagttggaacgttttggatggggtgttggtcttt
gtgtctctggtggacattctagtttctctggcctatactggcaccaacaggatcctgggg
attctcagagtccttcgtcttctacgcacccttcgccctctgagggtgatcagtcgcgcc
ccaggactgaagctggtcgtggagacactcatcacctctctaagacctattgggaacatt
gtattgatctgctgcgccttcttcattgtgtttggaatcttgggggtccagctgttcaaa
gggaaattttaccactgtgagggtctagacacaaaaaacgtcacaaacaggtccgactgt
gaactcgccaactacaagtggatacgaaggaagtacaattttgacaacttgattcaggct
ttgatgtctctgtttgtgctgtcgtgtaaggatggttgggtcaacatcatgtatgatgga
ctagatgcagtcggagtgaatcaacagcccgtgaggaaccacaacccctggatgctgctc
tacttcatctccttcctgctcatcgtcagcttcttcgtcctcaacatgttcgtcggtgtc
gtggtggaaaactttcacaagtgccggcaggaccaggaggaggaggaggcccgtttacgg
gaggagaagaggctcaaaatgatagataaaaagcgcaggagtaaggagaatggaggggct
gaggccaagcagagaccgtactacgccgactactctcctctgcgcctgaccatccacact
ctgtgcacaagccactacctggatctcttcatcaccttcatcatttgtatcaatgtcttc
acaatgagcattgagcactacaatcagccccagtatttggaggaggttctgaagtactgc
aactacgtgttcaccattatctttgtcatcgaggctctgctcaaacttgtggcctttggc
ttccatcggttcttcaaagacaggtggaatcagctggatgttggaatagttgccttgtcc
attctgggaatcactctggaagagctgaaaatgaaagctgctttgccaataaatcctacc
atcatccgaatcatgagagtactacgcattgcacgagtcctaaaacttcttaagatggca
aagggaatgagagctctcctcgatactgtcatgcaagcactgccccaggtgggaaatctt
ggtctcctcttcatgttgctcttcttcatctatgctgccctgggagtggaactcttcggc
aaactggaatgcagcgacagcaacccgtgtgaggggctgagccgtcacgcaacatttgag
aattttgggatggccttcctcacactgtttcgagtttccacgggagacaactggaatggg
attatgaaagacactttaagggattgccagccagacgaagtccactgtttgtcttaccta
ccctgggtgtctccaatttactttgtcaccttcgtgctcatggcccagtttgttttggtc
aatgtggtggtggctgttttaatgaaacacctggaggagagcaacaaggaggccaaagag
gacgcagagatggatgcagaaattgcactggaaatggaagtggagaggcaacgcagacaa
agcaccggatccaacaacagctcagtgggaggaacttatattgggccatgcccgaattca
cctgaagaggaggaagaacagcagtacaatgaccagaacctgctgtcttcaggcaagatg
tccgtatccaggatgcactctctgccaaatgacagctacatgtttcagcctgtacgacct
gctagcgccccctaccctacaaaggaggtagatgctagttcccagcaccagcatgcggtc
tcagtgatgtcggtccaatcccagccctgcgagagccgctctctgctgcaggttccagac
gcttcccctcttcatccccagtcgactcccaccctcactttgccccgcattgccccacca
acacctggcccctcaccacaggccctgcacagacagggggcagttaaagttgatgctgtg
gagttccaaaactgtgagcaacaggagaggtccagttcagcccatctacctccccgatcc
ccattgtcactctccccgctgcctccttttcccccttccccctctgccctctccttccac
ccatgcacgccatctccctcctctcttcctccgtcaccatcttccctcctgcctctcccg
tctcctccgtcttttctcctgcctccacctccctcaccgcgtctgccctctcgctccagc
agcctccgcaggcccagggctccgtccaccatttccctctcggacccggccgacgcagag
gtgtatcacattaccagctcggcttgccacaggtggagggacgcagaaggaggggaacag
gaaaacagacgcaaggcagggcgcagccactcgctgtccccttacgcctcgccgcactcc
ctcgatttgatccccacgctgcctcctccgtccaacaggagcacccttagtctgcacggg
gcaggatcaaaggacgtcaagaaaggcttcagtgtcgaccaccacggcttcctggagaag
cctcaattagaactggtggatcactcggatgaccaacggcgccactcgatcgaggtctgc
cttccgcaggccgtcataaccaccgacagccaaaactttatgctggagacccatcgatct
gaaaagggcgctcaggcctttcccatgagggtgcaatcagtcggcggcaggcagagaaag
aagaagacgagccctccctgcatctccatccacccgcccacagagagggaacaccgcctg
ctttcctcgcccccgaaactggccgactgcagcatgacgctgagacgcaggacatcttct
aacgacttcacacagcactcgcaagacacacccacagaaacgcagctccgcgcacacatg
cagacacctctaacaccgatccccgcgccgctgcggccacattcgccaacacacacactg
accccatcgcagggatccaccccgactcacgcccaggcgcacacgccatctcctgctcac
attcccatcagcccaaatatcttcatccagcctcacgcgcccctcctcccaaccgttatg
cctttctcacagacggtctcgaggcactccccacttgcaggagactgcatccctctctcc
cgattcaccttcgaccaaccgcagtccaggtacgtgggcgagcccgaatccgtcgcctgc
tcttccccttttgacaaccgactgggaagcagtccaggtttcagcgcaaagaatcggagg
accgcccagtga
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integrated database retrieval system
