Xiphophorus couchianus (Monterrey platyfish): 114162014
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Entry
114162014 CDS
T05908
Symbol
polg
Name
(RefSeq) DNA polymerase subunit gamma-1 isoform X1
KO
K02332
DNA polymerase gamma 1 [EC:
2.7.7.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114162014 (polg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114162014 (polg)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114162014 (polg)
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
114162014 (polg)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase gamma complex (mitochondrial)
114162014 (polg)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA polymerase
114162014 (polg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNApol_Exo
DNA_pol_A
Motif
Other DBs
NCBI-GeneID:
114162014
NCBI-ProteinID:
XP_027901564
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All DBs
Position
2:complement(18505774..18516851)
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AA seq
1195 aa
AA seq
DB search
MLHLSRCPLKRTFFSLRWRCLRSFYSTTPCSLQGEDSTETRMNPLNIQMLSRNLHEQIFR
GIEPEYREEAVERSIRHLQNHNLWGKETSLLPDVDLKLPRMYGKNIDDHFRILAEKQSIP
YLEAASKLQQADLPPMPQEWSWEVGWTRYGPGGESQKVDFPDESALVFDVEVCITEGQCP
TLAIALSPTNWYSWCSKRLIEERYSWSNQLTLADLIPLETPFNSSRPPGGQWKERLVVGH
NVSFDRSFIKEQYLLKGPNTRFMDTMSLHMAISGLTAFQRTLWMANKLGKKRGLQEVKEH
IKKTGQKREGPMIGSWAWVDISSINNLADVHALYVGGPPLQKEARNIFVKGTMLDVRNNF
QELMQYCALDVEATHQVFTEQLPLFMERCPHPVTFAGMLEMGVSYLPVNQNWDRYLEDSQ
DVYAELEREMKKSLMILADDACQLLQDDRYKEDPWLWDLEWDVQEFKQKKVAASKKKNSK
KAAEAKISTPLPDWEDDPGPPSEEEMAGPCSSRLAVEKLKETVTRLPKRRQHLPGHPAWY
RKLCEKMSEDSWSPGASLISLQMRLTPKLMGLTWDGFPLHYTEKHGWGYLVPGRRDNLNS
EEENHESLCPHRAIERIYKEHCEQNSKEQPEYLNPSDELVWTDSTVWTKVEELSALEHFP
EENGARLVKNEKKLKTQSHDPFSLSEESHCHYHHGNGPYNDIDIPGCWFFKLPHKDGNHN
NVGSPFSKDFLAKMEDGTLRAGRGETNATRALEINKMMSFWRNAHKRISSQMVLRLRKGE
LPRNVSRHKDYDEEGQYGAILPQVITAGTVTRRAVEPTWLTASNARRDRVGSEMKAMVQV
PPGYHLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSQGTDLHSRTADAVG
ISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLNQTEAASKARQMYALTKGVRRYHLSEE
GEWLVNELGIDVQREENGSVSLEELRRISRLASQSSRRKKWDIVAKRVWAGGTESDMFNK
LESVAHSAQPATPVLGCRISRALEPKAVKDEFITSRVNWAVQSSAVDYLHLMLVAMKWLF
EEYNIDGRFCISIHDEVRYLVRSEDRYRAALALQITNLLTRCMFAHALGMQDLPQSVAFF
SAVDIDQCLRKEVTMDCVTPSNPTGMERRYGIPPGEALDMNQILSTTKGSLSKGR
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatttgtcacgctgtcctctcaagaggacgtttttctctctgcgatggaggtgt
ctaaggtccttctactccaccacaccttgctcactgcagggcgaggactcgacggagacc
cgcatgaacccccttaacatccagatgctttccagaaacctccatgagcaaatctttcgt
ggcattgagccagagtacagggaggaagctgtggagcgcagcataaggcacttgcagaat
cacaatctgtgggggaaggaaacctcactgctgcctgatgtcgaccttaagcttccgcgg
atgtatgggaaaaacatagatgatcactttcgcatcttggctgagaagcagagcattccc
taccttgaggccgcctcaaagctgcagcaggccgacctcccacccatgcctcaggaatgg
agctgggaggtgggctggacccgctatgggcctggcggggaaagtcagaaagtggatttc
ccagatgagtctgcactagtgtttgatgtggaggtgtgcataacggaggggcagtgccct
actctggctatcgctctttctcctaccaactggtactcctggtgcagtaaacgtctaatt
gaggagcggtactcttggtcaaaccagctcactcttgcagacctcattcccctggagaca
ccgtttaactcttcccgccctccaggcggtcagtggaaggagaggctcgtagtgggtcac
aacgttagctttgatagatctttcatcaaggagcagtaccttctgaagggtccaaataca
cgcttcatggacaccatgagtcttcatatggccatctctgggttgacggccttccagcgc
acgctgtggatggccaacaagctgggtaagaagaggggccttcaggaggttaaggagcac
attaagaaaactggacagaagagggaaggcccaatgattggctcctgggcctgggtggac
ataagcagcattaacaatctagccgacgtccatgctctatatgtgggagggccgccactg
cagaaagaggccagaaacatttttgtgaaaggaactatgcttgatgtcaggaacaacttt
caggagctaatgcagtactgtgctttggatgtagaggccacacatcaggtcttcacagag
cagctgcccctcttcatggagaggtgcccgcatccagtgacgtttgctgggatgctggag
atgggtgtcagctaccttcccgtcaatcagaactgggaccgctacctggaggattcccaa
gatgtttacgcagagcttgagagggagatgaagaagtctctgatgattctagccgacgat
gcctgtcaactcctgcaggatgacaggtacaaagaagacccctggctttgggatcttgag
tgggatgttcaggagttcaagcagaagaaagtcgctgctagcaagaagaaaaactccaaa
aaagcagctgaagcaaagatttccactccccttccagactgggaagatgacccaggcccg
ccatccgaggaggagatggcaggtccttgctctagcaggctagctgttgagaaactcaag
gaaacagtgactcgtcttcctaagagaaggcaacatcttcctggacatccagcgtggtat
cgtaagctgtgtgagaagatgtcagaagacagctggtcgccgggagccagcctcatcagc
ctgcagatgaggctgacgccgaaactgatgggtctgacgtgggacggcttccccctgcat
tacacagagaaacacggctggggatatctggttcctggacggagggataatctgaattct
gaggaggaaaatcatgagtctctgtgtccacacagagccattgaaaggatatataaagaa
cattgtgagcagaacagcaaggaacagcctgagtatctaaacccttcagatgagcttgtg
tggaccgacagcacagtttggacaaaggtggaggagttaagcgccttggaacatttccca
gaagaaaacggagccagactggtaaaaaatgagaaaaagttaaagacgcagtcccacgat
cccttttctctcagtgaggaaagtcactgccactatcaccatggaaacggcccctacaat
gacatagatattccaggttgctggttttttaaattacctcacaaggacggtaatcacaac
aatgtaggcagtcctttttcaaaggacttcttggctaaaatggaggatggtacgttaaga
gcaggaagaggtgaaaccaacgcaacacgagctctggagatcaacaagatgatgtctttc
tggaggaacgctcacaaacggataagttctcagatggtgctgaggctaaggaaaggagaa
cttcctcgtaatgtcagcaggcacaaggactatgatgaagagggccagtatggggccatc
ctgcctcaggtcatcacagctgggactgtgacccgcagggctgtggagccaacgtggctg
accgccagtaatgctcggagggaccgagtaggcagtgaaatgaaagccatggttcaggta
ccacctggatatcacctggttggagcagacgtagactctcaggagctttggattgctgct
gtactcggagaggctcactttgctggcatgcatggttgcacagcatttggctggatgacc
cttcaagggaagaaaagtcaggggacagacctgcacagcaggaccgcagacgctgtgggc
atcagcagagaacacgctaaggtgttcaactacgggcggatatacggggcaggacagcca
ttcgcagagaggctgctgatgcagttcaaccaccgcctcaatcagacagaagctgccagt
aaggccaggcagatgtatgctttaaccaagggcgtacgcagataccatctatcggaggag
ggcgagtggctcgtcaatgagctgggtatagatgtgcaaagggaggagaatggaagcgtc
tcattggaggagctgcggaggatcagtagacttgcatcgcagagctcccggcgaaagaag
tgggatattgtggccaaacgcgtctgggccggaggcacggagtcggacatgttcaataag
ttggagagtgtagctcattcagcgcagccggccactcctgttctaggctgcaggatcagc
agagctctggagcccaaggcggtaaaagatgagtttatcactagcagagtgaactgggcg
gtccagagctcggcggtggactatctgcacctgatgctggtggccatgaagtggctcttc
gaggagtacaacatcgacgggcgtttctgcatcagcatccatgacgaagtgcgttacctc
gtccgcagcgaagatcgttacagagcagcgctggcgctgcagatcacaaacctgctgaca
aggtgtatgtttgcccatgcgttaggcatgcaggaccttccacagtcggtggcgttcttc
agtgcggttgacattgaccaatgtctgaggaaggaagttactatggactgtgtgactcct
tccaaccccactggtatggagaggcgatacggtattccacctggtgaggccctggacatg
aaccaaatcctcagcaccaccaaaggctctctgagcaaaggcaggtag
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