Xanthomonas campestris pv. raphani: XCR_2312
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Entry
XCR_2312 CDS
T01872
Name
(GenBank) hyaluronidase family
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
xcp02042
]
XCR_2312
00536 Glycosaminoglycan binding proteins [BR:
xcp00536
]
XCR_2312
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xcp00537
]
XCR_2312
Enzymes [BR:
xcp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
XCR_2312
Bacterial toxins [BR:
xcp02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
XCR_2312
Glycosaminoglycan binding proteins [BR:
xcp00536
]
Heparan sulfate / Heparin
Enzymes
XCR_2312
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
xcp00537
]
Enzymes
XCR_2312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAGidase
Glyco_hydro_20b
Glyco_hydro_84_hel
NagJ_C
Ribosomal_S5_C
Motif
Other DBs
NCBI-ProteinID:
AEL07198
UniProt:
G0CEC0
LinkDB
All DBs
Position
complement(2416054..2418018)
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AA seq
654 aa
AA seq
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MRHRRSFRIEAVLTAAALAAAVLPGAVAAESATPATAPAVFPAPTSLRLLGPELSLGTSV
VLVRPKGTDAASEALVRKVLTAAGVRKIRVATTPASEPNTVQVVLGLSETASVRSALEQT
GAALPERDEAYALGSRASGTGVTIVLAGKDSDGLYHAAQTFRQLVTAGQIPSVAITDAPA
MPVRGSIEGFYGKPWSMAEREDHLAFLARFKANTYIYSPKDDVFARERWREPYPAATLKA
LGKVVEVANREHINFVYAISPGPSVCYSDPAELDAIRRKFSALRKRGVRSFYVAFDDIEY
TKWNCKADEAAFGPSGEQAAATAQAKLLNAVQADIAAAGHGSLIMVPTEYFNATVSPYKT
TLHKALDPRVVIQWTGTDVVPASISVTDARNATKAFGRKTLLWDNYPVNDFAETTGRLLL
APYDRRQAGLSAELSGIVSNPMNQEVASRPAVAGLLAFAWNDVGYDAQRTWRYAARDLAG
NDPLVTQALLTFFDTQHVAPTFGHLPWQPQAPRLKALVDDARDALASGDQAAITPTLHAL
GNAADALAAAPAQIRAGSTTQAFVREADPWLTAAQLWGQSLRRSVDGVSAALAANPQAAS
QQFDAAKQLAEQAAAIQSMPGATRFAGPVKVADGVLDSFVKDAPGLVYVPAAQE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaccgccgatcgtttcgtattgaagccgtgctgaccgccgcagcgctggccgct
gccgtgctcccgggcgccgttgctgccgagtccgccacgccggcgactgcgccggcggtg
tttccggcgccaacatcgctgcgcttgctcgggccggagctgagcttgggcacgtcggtg
gtgctggtgcgccccaaaggcaccgacgcggcctccgaagccttggtacgcaaggtgctc
accgccgccggcgtgcgcaagatccgtgtcgccaccacacccgccagcgagccgaacacg
gtccaggtggtgctgggcctgagcgagaccgccagcgtgcgcagcgcgctggaacagacc
ggcgcggcactgcccgagcgtgacgaagcctatgcactgggcagccgcgccagcggcacc
ggcgtcaccatcgtgctggccggcaaggacagcgatggcctgtaccacgcggcgcagacc
tttcggcaattggtcaccgccgggcagataccgtcggtggccatcaccgatgcgccggcc
atgccggtgcgcggctcgatcgagggcttctacggcaagccctggagcatggccgagcgc
gaggaccacctcgctttcctcgcccgcttcaaggccaacacctatatctacagccccaag
gacgacgtgttcgcccgtgagcgctggcgcgagccctaccctgcggccacgctcaaggcg
ctgggcaaggtggtggaggttgccaaccgcgagcacatcaacttcgtctatgcgatatcg
ccgggcccgtcggtctgctacagcgatccggccgagctggacgccatccgccgcaagttc
agcgcattgcgcaagcgcggcgtgcgcagtttctatgtcgccttcgacgatatcgaatac
accaagtggaactgcaaggccgacgaagccgccttcggcccgtctggcgaacaggccgcg
gccaccgcgcaggcaaagttgctcaacgccgtgcaggcagatatcgccgcggccggccac
ggctcgctgatcatggtgcccaccgaatacttcaacgccactgtgtcgccgtacaagacc
acgctgcacaaggcactggatccgcgcgtggtcattcaatggaccggcaccgacgtggtg
cccgcctccatctcggtaaccgacgcgcgcaacgcgaccaaggccttcggccgcaagacg
ctgctctgggacaactacccggtcaacgatttcgccgaaaccaccgggcgcctgctactc
gccccgtacgaccgccgccaggccggcttgtcggcggagctgagcggtatcgtctccaac
ccgatgaatcaagaagtggccagccggccggcggtggcgggcttgctcgccttcgcctgg
aacgatgttggttatgacgcacagcgcacctggcgttatgcggcgcgcgatctggccggc
aacgacccgctggtgacccaggccttgctgaccttcttcgacacccagcacgttgcgccg
accttcggccacctgccctggcaaccgcaggcgccgcgcctcaaggcactggtcgatgac
gcacgtgatgcgctagccagcggcgaccaggcggccatcaccccgacactgcacgcactc
ggcaacgctgccgatgcactggcggccgcaccggcgcagatccgcgccggcagcaccact
caggccttcgtgcgcgaggccgacccgtggctcaccgcagcgcagttgtggggccagtca
ttgcgccgcagtgtcgacggcgtctcagctgcgctcgctgccaacccgcaagcggccagc
cagcagttcgatgcggccaagcaactcgccgaacaggcggccgccatccagtccatgccc
ggcgccacccgttttgccggcccggtgaaggtggcagacggcgtgctggacagcttcgtc
aaggatgcccctggcttggtatacgtgccagctgcgcaggagtaa
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