Xanthomonas campestris pv. raphani: XCR_2902
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Entry
XCR_2902 CDS
T01872
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xcp
Xanthomonas campestris pv. raphani
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xcp03009
]
XCR_2902
Enzymes [BR:
xcp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
XCR_2902
Ribosome biogenesis [BR:
xcp03009
]
Prokaryotic type
ribosomal protein modification factors
XCR_2902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
AEL07768
LinkDB
All DBs
Position
complement(3060872..3062272)
Genome browser
AA seq
466 aa
AA seq
DB search
MKSINYADSAKSRVPKVGFTSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTC
GFIDSAVTESLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAV
HAALPPRHDPFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLASRPVDEV
LREAERLVRGGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTR
LHYVYPYPHVDDVIPLMAEGRLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAM
CPEITVRSTFIVGFPGETDAEFEALLEFLDQAQLDRVGAFAYSPVEGASANALPDPVPEE
LKQERLARFMARQAEISAARLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQN
GGELKLKVGDLVDVEITDSDEHDLFGDALPSDPAAQPPRALNLQMV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaattaattacgcggattcggcgaagagtcgagtgcccaaagtagggttcacg
agtctaggttgcccgaaggcgctcgtcgattccgaacgcatcctcacccagctacgcgtg
gagggctacgacatcgtgcccagttacgacgccgccgacgtggtggtggtcaatacctgt
ggcttcatcgattcggcggtgaccgagtcgctggatgcgatcggcgaggcgatgaacgcc
aacggcaaggtgatcgtcaccggctgcctgggcaagcgcccggagcagatccgcgaggcc
tacccgcaggtgctggcggtctccggcccgcaggactaccagagcgtgatggaggcggtg
cacgctgcgctgccgccgcgccacgatccgttcgtggatctggtgccggactacggcatc
aagctgacgccgcgccactacgcatacctgaagatttccgaaggctgcaatcaccgctgc
agtttctgcatcattccttccatgcgcggcgacctggcctcgcgcccggtcgacgaggtg
ctgcgtgaggccgagcggctggtgcgcggcggcgtcaaggagctgctggtggtctcgcag
gacacctcggcctacggcgtggacctgaagtatgccgagcgcccgtggcgcgaccgcatg
taccagacccgcatgaaggcgctgtgcgaaggcttgtcggaactgggcgtgtggacgcgc
ctgcattacgtgtacccgtacccgcacgtggacgatgtgattccgctgatggccgaaggc
aggctgctgccgtacctggacatcccgttccagcacgccagcccgcgcatcctcaagctg
atgaagcggccgggcgcagtggaaaagaccctggagcgcgtgcagcgctggaaggcgatg
tgcccggagatcacggtgcgctcgaccttcatcgtcggcttccccggcgagaccgatgcc
gagttcgaagcgctgctggagtttctggatcaggcgcagttggatcgcgtcggggcgttt
gcgtattcgccggtggagggcgctagcgccaacgcattgccggacccggtgccggaagaa
ctgaagcaggagcgtctggcgcgcttcatggccaggcaggcggagatttccgcggcgcgg
ctggaagccaagatcggcagcgtgcagcaatgcctggtcgacctgatcgaagacgatatc
gcggtggcccgttcgcgtgcagacgcgccggagatcgacggcctggtgcatatccagaac
ggcggcgagctcaagttgaaggtgggcgacctggtcgatgtggaaatcaccgacagcgat
gagcacgatctattcggtgatgcgctgccgtctgatcctgcggcgcagccgccccgcgca
ttgaacctgcagatggtctag
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