Xanthomonas campestris pv. raphani: XCR_3103
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Entry
XCR_3103 CDS
T01872
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00550
Peptidoglycan biosynthesis
xcp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XCR_3103 (murD)
Enzymes [BR:
xcp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
XCR_3103 (murD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
AEL07967
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All DBs
Position
complement(3276536..3277942)
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AA seq
468 aa
AA seq
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MRISQLEGKAVALWGWAREGRAAYRALRQQLPAQALTVFCNAEEARDVAALADPALQVQT
EASAQALAAFEVVIKSPGISPYREEARAAAAQGTRFIGGTALWFAEHAQPDGYVPGAICV
TGTKGKSTTTALLAHLLRSDGHRTALVGNIGQPLLEVLSPQPPPAYWAIELSSYQTGEVG
RSGARPELALVLNLFPEHLDWHGSEAAYVRDKLALVTDGRPRIALLNAADPHLAQLQLPE
SEVRWFNHPDGWHLRGDVVYRGQQPIFDTANVPLPGEHNRRNLCAVLAAVEALGLDAAAL
APAALTFRPLPNRLQWLGSVDGIAYVNDSISTTPHASLAALACFAQQRVALLVGGHDRGL
DWQDFAAHMAQQAPLEIVTMGANGPRIHALLAPLAQSAGFGLHAADDLAHAMQLARSALG
AQGGVVLLSPGAPSFGVYSDYVARGRHFAQLAGFDPAAISAIPGLGVQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
gtgcgaatttcgcagcttgagggcaaggcggttgcgttgtggggatgggcgcgcgaaggg
cgcgccgcctatcgcgcgctgcgccaacagctgcctgcgcaggcgctgacggtcttttgt
aacgccgaagaggcacgcgacgttgccgcattggcagaccccgcgttgcaggtgcagacc
gaagcgagcgcacaggcgctggccgcgttcgaggtcgtgatcaagtcaccgggcatcagc
ccgtaccgtgaggaggcacgcgccgccgccgcgcagggcacgcgcttcatcggcggcacc
gcgctgtggtttgccgaacacgcgcagccggacggctacgtgccgggcgcgatctgcgtg
accggcaccaagggcaagagcaccaccaccgcgctgctggcgcatctgttgcgctccgac
ggccatcgcaccgcgctggtcggcaatatcggccagccgttgctggaagtgctctcccca
cagccgccgcctgcgtactgggcgatcgagctgtccagctaccagaccggtgaggtgggg
cgcagtggcgcacgcccggagttggcgctggtgctgaacctgtttcccgagcatctggac
tggcacggcagcgaagcggcgtatgtgcgcgacaagctggcgctggtgaccgacggccgc
ccgcgcatcgcgctgctcaatgccgccgacccgcatctggcgcagctgcagctgcctgag
agtgaggtgcgttggttcaatcatcccgatggctggcatctgcgtggcgacgtggtctat
cgcggccaacagccgattttcgatactgccaacgtgccgctgccgggggaacacaaccgg
cgcaacctgtgcgccgtgctggcggcagtggaggccctgggcctggatgcggcggccctg
gcgccggcggcactgacctttcgtccgttgcccaaccggctgcagtggctcggcagcgtg
gacggcatcgcatacgtcaacgattccatcagcaccacaccgcatgcctcgctggcggcc
ttggcctgcttcgcacaacagcgcgtggcgctgctggtgggcgggcacgaccgtgggctg
gactggcaggacttcgccgcgcacatggcgcagcaggcgccgttggaaatcgtcaccatg
ggcgccaacggcccgcgcatccatgcgttgctggcaccactggcgcagagcgccggcttt
ggcctgcatgccgccgatgacctggcgcatgcgatgcagctggcacgcagcgcactcggt
gcacagggcggggtagtgctgctgtcgcccggcgcgcccagctttggcgtgtacagcgat
tacgtggcgcgtggccgccactttgcgcaactggcggggttcgatcctgcggcgatcagt
gcgattcccggcctgggtgtgcagtag
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