Xanthomonas campestris pv. raphani: XCR_4146
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Entry
XCR_4146 CDS
T01872
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
xcp
Xanthomonas campestris pv. raphani
Pathway
xcp00362
Benzoate degradation
xcp01100
Metabolic pathways
xcp01120
Microbial metabolism in diverse environments
xcp01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
xcp00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XCR_4146 (pcaB)
Enzymes [BR:
xcp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
XCR_4146 (pcaB)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
ADSL_C
Motif
Other DBs
NCBI-ProteinID:
AEL09003
UniProt:
G0CK34
LinkDB
All DBs
Position
complement(4449019..4450371)
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AA seq
450 aa
AA seq
DB search
MSATFSLLGGLFGDPACDEVFDDAARVQAMLDFESALARAQAQCGVIPQAAAQVIAAQCH
AAQYDLAALAQATALAGNPAIPLIKELTRQVAAHDADAARWVHWGATSQDVIDTGSVLQL
RAAFDLLLPRLDALCACLATLAARERATGLPGRTLLQQAVPVTFGLKAAGWLDALQRARR
RLHTARTEALVLQFGGAAGTLAALETRGLEVAQALAQALQLPLPALPWHTARDRLVEVGC
AFALLAGSLGKIGGDVVLLMQSEVGEAFEPAAAGKGGSSAMPHKRNPVAGVVAVAAATRV
PGLVATLFATMAQPHERAAGQWHAEWETLPEIVRLTAGSLAQMQACLAGLELDRTRMQAH
LHSHGGVLYAEAAVFALARQLGKSQAHTLVEHAVARAQSAGRHLREELADDPHVQAMLSP
AQLEAIFAPDSWRGMASVWIDRVLAASPSP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaacgttttccctgctgggcggcctgtttggcgaccccgcgtgcgatgaagtg
ttcgacgatgccgcgcgcgtgcaggcaatgctggacttcgagtccgcgctggcccgggcg
caggcgcaatgcggggtgattccgcaggcggccgcgcaggtcattgccgcgcagtgtcac
gcagcgcagtacgacctggccgcattggcgcaggccaccgcactggccggcaaccctgcc
attccgttgatcaaggaactgacccggcaggtggccgcgcacgatgccgatgccgcgcgc
tgggtgcattggggcgccaccagccaggacgtgatcgataccggcagcgtgctgcagctg
cgcgcggccttcgacctgctgctgccgcgcctggacgcactgtgcgcctgcctggcgacg
ctggccgcacgcgagcgcgccaccgggctgccgggccgcaccctgttgcagcaggcggta
cccgtgaccttcgggctcaaggccgcgggctggctggacgccttgcagcgcgcacgccgc
cgcctgcacaccgcgcggaccgaggccttggtgctgcaattcggcggcgccgccggcacc
ctggccgcgctggaaacgcgtgggctggaggtggcgcaggccctggcgcaggcgctgcag
ttgccgctgccggcgttgccctggcacaccgcgcgcgaccgcctggtggaggtgggttgc
gcattcgcgttgctggccggcagcctgggcaagatcggcggcgatgtggtgctgctgatg
caatcggaagtgggcgaggcgttcgagccggcggcggcgggcaagggcggctcctcggcg
atgccgcacaagcgcaacccggtggccggcgtggtggcggtcgccgccgccacgcgcgtg
cccgggctggtggccaccttgttcgccacgatggcgcagccgcacgagcgcgcggccggg
cagtggcatgccgaatgggaaacgctaccggagatcgtgcgcctgaccgccggcagcctg
gcgcagatgcaggcctgcctggccgggctggagctcgaccgcacgcgcatgcaggcgcat
ctgcacagccacggtggcgtgctctacgcggaggccgcggtgttcgcactggcgcggcag
ctgggcaagtcgcaagcgcatacgctggtcgaacatgcggtggcgcgtgcgcagtcggca
gggcgtcatctgcgcgaggagctggccgacgatcctcacgtgcaggcaatgctctcgccg
gcacaactggaggcgatcttcgcgcccgacagctggcgtggcatggcgtcggtctggatc
gaccgcgtcctggccgcttcaccttccccctga
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