Xanthomonas campestris pv. vesicatoria: XCV4200
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Entry
XCV4200 CDS
T00288
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xcv
Xanthomonas campestris pv. vesicatoria
Pathway
xcv03030
DNA replication
xcv03410
Base excision repair
xcv03420
Nucleotide excision repair
xcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XCV4200 (polA)
03410 Base excision repair
XCV4200 (polA)
03420 Nucleotide excision repair
XCV4200 (polA)
03440 Homologous recombination
XCV4200 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xcv03032
]
XCV4200 (polA)
03400 DNA repair and recombination proteins [BR:
xcv03400
]
XCV4200 (polA)
Enzymes [BR:
xcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XCV4200 (polA)
DNA replication proteins [BR:
xcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XCV4200 (polA)
DNA repair and recombination proteins [BR:
xcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XCV4200 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XCV4200 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CAJ25931
UniProt:
Q3BMT2
LinkDB
All DBs
Position
complement(4810371..4813172)
Genome browser
AA seq
933 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPPMPEDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
ADGLQVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAQAGLLAEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPSLSAPGQYETILTQEQLDSWIARLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGQAAYLPFGHHFPGAPAQLDRTQALAQLAPLLTDPAVR
KLGQHGKYDLHVMRRHGVALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLEDATRYAAEDADITLRLHRVLGPRLASEPDLERVYRDIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRSFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMVHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMA
HLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVNVDGWIANHAQRAKMILQVHDELVFEADIDFVDT
LLSEVTTRMAGAAELRVPLVVDSGVGDNWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggtgcgttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggagcgcccggcctatgtcgcgttcgtggtggacgcgcctggc
aagacatttcgcgatgacttgtatgccgactacaaggccaaccgccccccgatgcccgag
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgttgggcatcgacatc
ctgcgcatcgatggcgtggaagcggacgatgtgatcggcacgctggcgctgcagggcgcc
gccgatggcttgcaggtcaccatctccaccggcgacaaggacttcgcccagctggtgcgt
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggcccgatcagatcgtcgacctgctggcgttgatgggcgac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgatggcgtcatcgccaacgccgacaagatcaagggcaagatc
ggcgacaacctgcgcgccgcattgccacgcctgccgctcaaccgtgagctggtgaccatc
aagaccgatgtcaccctggccagcggcccgcgcgcgctggacctgcgcgagcccaacgcc
gaggcgctggcggtgctgtacgcccgctacggcttcacccaggcgctgcgcgaactcggt
ggtgcggccgcccaggcgggcctgctggccgagccggtggcgctgggcgctgctgctgcc
actgcgcgcaccgagcctggccgcgcgcgcggcaccggcttcgtctccggccccgtcaac
gccgcggtggatctcgatccgtcgctgtcggcgcccggccagtacgagaccatcctgacc
caggagcagctcgacagctggatcgcgcggctgcgtgccgccgggcagttcgccttcgat
accgaaaccgacagcctggacccgctgcaagccgatttgatcggcctgagcgtggcggcc
gagcccggccaggcggcgtacctgccgttcggtcatcacttccccggtgcgccggcccaa
ctcgaccgcacccaggcattggcgcaactggcgccactgctcaccgacccggccgtgcgc
aagctcggccagcacggcaagtacgacctgcacgtgatgcgccggcatggcgtggcgctg
gccggctatgccgacgacaccctgctggagagcttcgtgctcaattccggcagtgcccgc
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtctgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggaagacgccacc
cgctacgccgccgaggacgccgacatcaccttgcgcctgcatcgcgtgctcggcccccgg
ctggccagcgaaccggacctggagcgcgtctaccgcgacatcgaaatgccgctggtggac
gtgctggcccgcatcgaagccaacggtgtgtgcgtggatgcggccgaactgcgccgccag
agtgcggacctgtccaagcgcatgctcgctgcccagcagaaagccaccgagctggccggg
cgcagcttcaacctggattcgcccaagcagctgcaggccttgctgttcgacgaactcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagaagcactggaa
gccatcgccgaccagcacgagctgccgcgggtcatcctggaataccgtggcctggccaag
ctgcgcagcacctacaccgacaagctgccggagatggtccacccgcagtccgggcgcgtg
cacaccagctaccaccaggccggcgccgccaccgggcggctgtcctcgtccgatccgaac
ctgcagaacatcccgatccgcaccgaagacggtcgtcgcatccgccgcgccttcgtcgcc
ccggccggacgcaagctgatcgcctgcgactattcgcagatcgagctgcgcatcatggcg
cacctgtccggcgaccccggactggtgggcgcgttcgaatccggcgccgacgtccaccgc
gccaccgccgccgaagtgttcggccgcaccatcgacaccgtcagcggcgatgagcgccgc
gccgccaaggccatcaacttcggcctgatgtacggcatgagcgccttcggcctggcccgt
cagctcggtatcggccgcggcgaggcgcaggactacatcgcgctgtacttcagccgttac
ccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaacggtgttcgggcgccggctttatctggacttcatcaatgccggcagccagggccag
cgtgccggtgccgagcgcgccgccatcaacgcgccgatgcagggcaccgccgcagatatc
atcaagcgcgccatggtcaacgtggacggctggatcgccaaccacgcgcaacgcgcgaag
atgatcttgcaggtgcacgacgaactggtgttcgaagccgatatcgatttcgtcgatacg
ctactgagcgaggtcaccacgcgcatggcgggcgcagctgaattacgcgtgccgttggtg
gtggattcgggcgttggcgataattgggaccaagcgcattga
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