KEGG   Xenorhabdus doucetiae: XDD1_0838
Entry
XDD1_0838         CDS       T03784                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein ribD [Includes: Diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase]
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xdo  Xenorhabdus doucetiae
Pathway
xdo00740  Riboflavin metabolism
xdo01100  Metabolic pathways
xdo01110  Biosynthesis of secondary metabolites
xdo01240  Biosynthesis of cofactors
xdo02024  Quorum sensing
Module
xdo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xdo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XDD1_0838 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XDD1_0838 (ribD)
Enzymes [BR:xdo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XDD1_0838 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XDD1_0838 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: CDG16541
UniProt: A0A068QPH2
LinkDB
Position
816144..817250
AA seq 368 aa
MTLDEIYMSRALELAYQGRFTTSPNPNVGCVIVKDEQIVGEGFHLRAGEPHAEVHALRMA
GEKAKGATAYVTLEPCSHHGKTPPCADALIAAGLSRVVVAMQDPNPQVAGRGLYKLQQAG
IAVEHGLMMEQAESLNKGFLKRMRTGFPYLQLKLGASLDGRTALASGESKWITSPQARQD
VQKLRAQCSAILSSSATVLADDPSLTVRWHELDAETQAVYPQELLRQPIRIITDSQNRVT
PQHQVIRQTGECWLARTQQDPQKWPDQVEQILLPEHGHGVDLVLLMMQLGKRQVNSVWSE
CGPALAGALLSLGLVDELILYIAPKVLGNRARGLFDIPELQKLSDAPEFSLFDVQQIGPD
VRLRLRPL
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgacacttgatgaaatctatatgtcccgcgcgctggagttggcgtatcaagggcgtttt
accacatccccaaacccgaatgtcggttgtgtcatcgttaaggatgagcagatcgttggg
gaaggttttcatttacgggcgggcgagcctcatgccgaagttcatgccctgcgtatggca
ggcgaaaaagccaagggcgctaccgcttatgtgacccttgaaccgtgcagccatcacggt
aaaacaccgccctgtgctgatgctttgattgccgcgggcttaagccgtgtggtggtcgcg
atgcaagatcctaatccgcaagttgccggacggggtttatataaattacagcaagccggc
attgccgttgaacatggcttgatgatggagcaggcggaatccctgaacaaaggatttctt
aaacgcatgcggaccgggttcccatacctgcaattgaaactgggcgcatcattggatggc
cggactgcattggcatcgggggaaagcaagtggattacctcaccgcaagcccgccaagat
gtgcagaaactacgggcgcaatgcagtgccattttgagttccagcgcaacggtgttggcc
gatgatccctctctgacggttcgttggcatgagctggatgccgaaacacaagccgtttat
ccgcaagaattgctccgccagccaattcgtattattacggatagccaaaatcgtgtgacg
ccacagcaccaagttatccggcaaaccggggaatgttggctggcacgtactcagcaagat
ccacaaaaatggcctgatcaggtcgaacagattttattgccggaacatggccacggtgtc
gatttagtgttgctgatgatgcaactgggtaagcgtcaggtgaattctgtctggtcggaa
tgtggccctgccttggccggggcgttattatcgctgggcctggtcgatgaattgatcctg
tatatcgcgcctaaagtgttgggtaaccgtgcccgtgggttgttcgatatccctgaattg
caaaaattatcggatgcgcctgaattttctctgtttgatgttcaacagattggcccggat
gtgcgtctgcgtttacgaccgctttag

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