Xanthomonas dyei: NYR95_17015
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Entry
NYR95_17015 CDS
T09460
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00020
Citrate cycle (TCA cycle)
xdy00640
Propanoate metabolism
xdy00660
C5-Branched dibasic acid metabolism
xdy01100
Metabolic pathways
xdy01110
Biosynthesis of secondary metabolites
xdy01120
Microbial metabolism in diverse environments
xdy01200
Carbon metabolism
Module
xdy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xdy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NYR95_17015 (sucD)
00640 Propanoate metabolism
NYR95_17015 (sucD)
00660 C5-Branched dibasic acid metabolism
NYR95_17015 (sucD)
Enzymes [BR:
xdy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
NYR95_17015 (sucD)
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
IlvN
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
WOB53048
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All DBs
Position
complement(3907325..3908200)
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AA seq
291 aa
AA seq
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MSVLINKNTKVIVQGFTGQQGTFHATQMIEYGTQVVGGVTPGKGGTTHIDLPVFNTVADA
VQSTGADASVIYVPPPYAADAILEAAAAGIKVIVCITEGIPVLDMLRVKNVLTRSHPDTV
LIGPNCPGVITPGECKIGIMPGHIHKPGKIGIVSRSGTLTYEAVKQTTEVGLGQSTCIGI
GGDPINGLNFVDCLKLFNEDPQTEGIIMVGEIGGDAEEAGAEYIKQFVKKPVVGFIAGAS
APAGKRMGHAGAIASGGKGTAEGKFAAMEAAGVKTVRSPGDLGAAIAALVK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttgattaacaagaacaccaaggtgatcgtgcagggcttcaccggccagcag
ggcaccttccacgccactcagatgatcgagtacggcacccaggtcgtcggcggcgtgacc
cccggcaagggcggcaccacgcatatcgacctgccggtgttcaacaccgtggccgacgcc
gtgcagagcaccggcgccgatgcgtcggtgatctacgtgccgccgccgtatgcggccgac
gcgatcctggaagcggctgcggccggcatcaaggtcatcgtctgcatcaccgaaggcatc
ccggtgctggacatgctgcgcgtcaagaacgtgctgacccgctcgcatccggacaccgtg
ctgatcgggccgaactgccccggcgtgatcaccccgggcgagtgcaagatcggcatcatg
ccgggccacatccacaagccgggcaagatcggcatcgtgtcgcgttcgggcaccctgacc
tatgaagcggtcaagcagaccaccgaagtgggcctgggccagagcacctgcattggcatc
ggcggcgacccgatcaacggtctgaacttcgtcgactgcctcaagctgttcaacgaagac
ccgcagaccgaaggcatcatcatggtcggcgagatcggcggcgacgccgaggaagctggc
gccgagtacatcaagcagttcgtgaagaagccggtggtcggcttcatcgccggtgcgtcg
gctccggccggcaagcgcatgggccacgccggtgcgatcgcatcgggcggcaagggcacc
gccgaaggcaagttcgcggcgatggaagccgctggcgtcaagaccgtccgttcgccgggc
gatctgggtgcggcgattgctgcgctggtgaagtaa
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