Xenia sp. Carnegie-2017 (soft corals): 124434031
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Entry
124434031 CDS
T08024
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124434031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Bac_RepA_C
Motif
Other DBs
NCBI-GeneID:
124434031
NCBI-ProteinID:
XP_046839841
LinkDB
All DBs
Position
Unknown
AA seq
1778 aa
AA seq
DB search
MSSLLLVFVVFLCLPGLISSQLDDIEEDNCISNACYPSTGDLLVGRGKKLYASSICGEKG
PQRYCTISKLDGRSCTYCDSRSISPKIYQHLPEFMEINFNEKKQSWWQSKNGQESVYLQL
DFDAQFHVTHVIMKWKSFRPAAMLIEKSFDYGRSWNVSRYYAKSCQLSFPGVPTRPTRDI
SIPYCTPKYSKLEPSTGGEVVYKALRGNENAADVKTQNLLRVTNLRIKFTKLNTLGDDII
DNSLESTLNYYYAVDWITIRGSCSCYGHARHCLPGPGEDSGVSGMVHRICNCTHNTKGVN
CEECKDLYNDHPWRPAEQGNPNECRKCECNSHADKCKFDVAVWEASGQTSGGVCIDCKHN
TIGTKCEKCKPLHYKDPSLPMSDPNVCKTCDCDPSGSVGLGECQMEEDPVLNLRAGQCIC
KRNVYGARCDRCKNGYFNLRKENLDGCEACACDINGAIGSSCDTITGKCQCKRFVEGDKC
DKCFDEYWGLASSTGCKPCDCDPGGAYSNRCDPVSGQCSCRPGIEGMKCDRVIPGYYYAL
SDNLKYEAEDARGIGLTKIRLLERFNNTPVVWSDVGSVKITEGNAVEFTVTNIPVTGNYK
ILMRFHPRTLAFWEEVKVSITRADGQRTVNGVCGNSLSFNGYSVFITMQSFQQTKLLDDM
VCLEKGVHYFLRVDFNRHQGRDDHINLDSVVLIPDMSSVDIFQGGRGQLRFNDFINYRCE
QSNLLARYPRLKVNEVCKKLHFSGSAIIYDGAILCACNEIGTVKNVSGIYTCDNAGGQCP
CRINVIGRTCQKCAPGTYNFGPNGCSPCECDLRGSHDNLCDVVTGQCKCNGLGIGRKCNE
CPDGEWGFPTCRPCECNGHASRCDPVTGVCIDCAHNTAGVNCELCKAGYYGNATKGTSTD
CQKCQCPGGSSENDFSPTCRVDGSTIPPSFICDKCEPGYEGNQCESCSEGYYGNPLLPGG
KCEKCNCSGNINVTLSGGCDKKTGECFGCLYNTAGYYCDVCKPGYYGNAKNQTCQACNCS
EIGTVLNSGSCDSFTGQCQCKPNVVGLSCDRCAQDYWDLNSGTGCKACKCCKDGSTTTQC
DEVSGACSCRGDFGGPNCCHCEDGFWGVPPGQCQPCNCNPNGVTQSQCDRKTGKCYCKPG
ITGLKCNKCELETTRLFPECKACHDCYYSWDKIISELEDFARRLNRTIRKDGDDAIVSVD
YQKEIDALKEILRKIEYILGNKTTFLSHVENVQNEMDEHEKKVVEMMKIIEELKENLNVT
RLRMNNANIEIEKLWKNYRKLKVLFDGHLDELTTTIEGPKADDALNITNHYYRISNKTLD
DAKDVRKIVDESAIKREEFKRKTSEYETRNRKIFEKLEDYRREYGDLNDIIALINAKLCG
SNSTLCGGCTIIGCDGCGDNKGCDGAVPLSMVALEKAKLAEDALRLKEEKANATLAEAIE
AQSKVDNAMNEAKIALELAKSIELQTFNNTVVVGGLIEEIYIYLNRSAVLDTDEIRRIGE
FVLGRKLNISEEGIIMLGERIKEAVRKLTGIDQILEDTERDFAMIEDLKQQAIQANTSAT
VASRTAQNITKWLKMVGVIQNGWKTSLNKTKDKLDYIDLKLLEIEGLINKTMNRSFESVR
ITNEASKRLGPLDMKFSENEKSLLNSEKDINETAKLASDTKTNSNNVKILSEEVNEQFNK
TLNDTLKFHKRAKKAFDSATTIKLSLINTLRRLQSYYIERNDLDDVIEKLKILESKVAEK
FCQIKLDSKRLSECQNQGQDVRSTNTIEGYCDQLEKEN
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctactgttggtttttgttgtcttcctttgccttccaggtttgatatcgagt
cagcttgacgatattgaagaagataactgcatcagtaatgcgtgttatccttcaactgga
gatcttcttgttggtcgtggtaaaaagctttatgccagttcaatatgtggtgaaaaaggc
ccacaaagatactgcacaatctcgaaacttgatggtcgttcctgcacttattgcgattcg
agatctatttcaccaaaaatataccaacacttacctgagttcatggaaattaactttaat
gagaaaaagcaatcttggtggcagtctaaaaatgggcaagaaagtgtttatttgcagctg
gattttgatgcacaatttcatgtcacgcatgtcataatgaaatggaaatcatttcgtcca
gctgccatgttgattgagaagtcttttgattatggacgatcgtggaatgtctcaagatac
tacgctaagagttgtcaattgtcttttcctggtgtaccgacgaggccaaccagagacatc
tctatcccttattgcaccccaaaatactctaaacttgaaccatctactggaggagaggtt
gtctacaaagcattgagaggtaatgaaaacgctgcagatgttaaaacacagaatttattg
cgagtgaccaacctccgtataaaatttaccaaactaaatactttgggagatgatattata
gacaacagcttggaatcgactttgaattactactatgctgttgattggatcacaattcgt
ggcagttgttcgtgttatggtcatgctagacattgtcttcctggacctggtgaagatagt
ggtgtgtcaggaatggttcatcgtatatgtaactgtacacacaacacaaaaggagttaat
tgtgaggaatgtaaagatttatacaacgatcatccatggcgaccagctgaacaaggaaat
cccaacgaatgtagaaaatgtgaatgtaacagccatgcagataagtgtaaatttgacgtt
gctgtttgggaagcttctggtcaaactagtggtggcgtttgtattgactgtaaacataac
accattggtaccaaatgtgagaaatgtaaaccattgcattataaggatccttctttaccc
atgagtgatccaaatgtttgcaaaacttgtgactgcgatccttctgggtctgtcggtctt
ggtgaatgtcaaatggaggaagaccctgttctcaacttgcgagcaggtcaatgtatatgc
aagagaaatgtctatggagctcgctgtgatcgatgtaagaatgggtattttaatttgaga
aaagagaatcttgatggatgtgaagcatgtgcttgtgacataaacggtgctattggttca
agttgtgatacaatcacaggaaaatgtcaatgtaaaagatttgttgaaggcgacaaatgt
gataaatgttttgatgaatactggggcctggcgtcttcaactggatgcaaaccatgtgat
tgtgacccggggggtgcctatagcaaccgatgtgaccctgtgagcggacagtgctcttgt
agacctgggatcgaggggatgaaatgcgaccgcgtcattcctgggtactactacgcactt
tctgacaaccttaaatatgaggcagaagatgcgcgagggattgggttgacgaaaataaga
cttcttgaacgttttaacaacactcctgtcgtttggagtgatgttggtagtgtgaagata
actgaaggaaatgcagtagagttcacagtcacaaatattcctgttactggaaactataaa
attctcatgagattccatcctaggactttagcattttgggaggaagtaaaggtttccatt
actcgggctgatggtcaaaggacagttaatggtgtttgtggaaattctctatcgtttaat
ggatattctgtgtttatcacgatgcagtcttttcaacagacaaaacttcttgatgatatg
gtgtgtttggagaaaggtgtacattattttcttcgcgttgacttcaatcgtcaccaagga
cgcgatgatcacataaacttggactctgttgttttgataccagatatgagttctgtagat
atatttcaaggaggacggggacagttaaggtttaatgattttataaattaccgttgtgaa
caatcgaatcttcttgcgagatatcctcgactgaaggtcaacgaagtgtgtaaaaagtta
catttctctggttctgcaatcatttacgatggagccatattgtgtgcctgcaatgagatt
ggcacagtgaaaaatgtcagcggtatttacacgtgtgacaatgctggtggtcaatgtcct
tgtagaatcaatgtgattggtcgtacttgccagaaatgtgctcctgggacttataacttt
ggcccaaatggttgttcaccttgtgaatgcgatctccgtggatcacatgacaatttatgt
gacgttgttactggtcaatgtaagtgtaatggtcttggcattggtcgaaagtgtaacgaa
tgtcctgacggagaatggggttttcccacgtgtcgcccatgtgaatgtaatggacatgca
tcacgttgtgatcccgtgacaggcgtctgcatcgactgcgcccacaataccgctggcgtg
aattgtgaactttgtaaggcaggatattatggcaatgctacgaaaggtacctcaaccgac
tgccaaaaatgtcaatgtcccggaggaagcagtgaaaatgattttagtcccacgtgcaga
gtagatggaagtactatacctccatcgtttatctgcgataaatgtgagcctggatacgaa
ggaaatcaatgtgagtcatgcagtgaaggttattatggtaatccccttcttcctggggga
aaatgtgaaaaatgcaactgtagtggaaacatcaacgttactttgtctgggggatgtgac
aaaaaaacaggagagtgctttggatgtctttataataccgctggctattactgtgacgtg
tgtaagccaggttactatggtaatgcaaagaatcagacttgccaagcttgcaactgtagc
gagattggaacagttttgaattcaggctcttgtgattctttcactggtcaatgtcaatgt
aagccaaatgttgttggtttgtcatgtgatcgttgtgcgcaagattactgggacctaaat
agtggtacaggatgtaaagcatgcaaatgttgtaaagatggttcaacaacaactcaatgc
gatgaggtaagtggagcttgctcgtgtcgtggtgatttcggaggtcccaattgttgtcat
tgtgaagatggtttctggggtgtaccccccggccaatgtcaaccttgcaactgtaatccc
aatggagtcacacagtcacaatgcgatagaaaaactgggaaatgttattgtaaacctggt
atcacgggactcaaatgcaataaatgtgaattggaaacaactcgattatttccggaatgt
aaagcgtgccatgattgttactatagttgggataaaatcatttctgaactcgaagatttt
gctcgacgtttgaatagaactattaggaaagatggagacgatgctattgtaagtgttgat
tatcagaaggaaattgatgcacttaaagaaatcttgcgaaaaattgaatacattcttggc
aacaaaaccactttcctttctcatgttgaaaatgttcaaaatgaaatggatgaacatgaa
aagaaagtcgtggaaatgatgaaaattattgaagaattaaaagaaaacctgaacgtcact
cggttacgtatgaacaatgcaaatattgagatagagaaactttggaaaaattatagaaaa
ttgaaagttttatttgacggtcatttggacgagttaacgacgactattgaaggaccaaag
gctgatgatgcattgaatattacaaatcattactatagaatatccaataaaacacttgat
gacgctaaagatgtaagaaaaattgttgacgagtcagcaataaaacgtgaagagtttaaa
aggaagacgtctgaatatgaaacaagaaataggaaaatttttgagaaattagaagattat
cgaagggaatatggcgatttgaatgatattattgctttgattaatgctaagctctgtggt
agtaactcaacgttatgtggtggttgtacaatcattggttgtgatggttgtggtgataat
aagggatgcgatggtgctgtaccactttctatggttgccttggagaaggcaaaattggct
gaagatgcattaagattaaaagaagaaaaggcaaacgcaacgctggccgaagcaattgag
gctcaaagtaaagtcgacaatgccatgaacgaagctaaaatagctctggaacttgccaaa
tctattgaattgcagactttcaataatactgtcgtcgtgggcggtttaatagaggaaatc
tacatttacctgaaccgtagtgcagtcttggatacggacgagattcgaagaattggcgag
tttgttttaggacgaaaattaaatatatcagaagaaggaataatcatgcttggtgaaagg
ataaaggaagctgtaagaaaacttactggcattgatcaaattcttgaagacacagaaaga
gattttgcaatgattgaagatcttaaacaacaggcaatacaagccaacacatctgctact
gttgcatcgcgaactgcgcaaaatataactaaatggttgaagatggtcggcgttattcaa
aatggttggaaaacatctttaaataaaacaaaagataaattggattacatcgaccttaaa
ttattagagattgaaggtctaataaacaagacgatgaataggtcctttgagtctgttcgc
ataacgaacgaagcgagtaaaagacttggacctttggatatgaaattcagtgaaaatgag
aagtcattgttaaacagtgaaaaagatatcaatgagacagccaaacttgcgtccgacaca
aaaactaactcaaataatgtgaagattttatcggaggaagtaaatgagcagtttaataaa
actttgaatgacactttaaagtttcacaaaagagcaaagaaagcttttgattctgccacg
acaattaaactgtcacttataaacactctccgtcgattgcaaagttattacatagaaaga
aatgacttggacgatgttatagaaaaattaaagatactggagtcgaaagtggcagagaag
ttttgtcagattaaactagacagtaagcgactctcggaatgtcaaaaccaaggacaagat
gtgaggtcaacgaacacaattgaaggttactgtgaccaacttgagaaggaaaattaa
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integrated database retrieval system