Xenia sp. Carnegie-2017 (soft corals): 124438062
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Entry
124438062 CDS
T08024
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124438062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124438062
Ion channels [BR:
xen04040
]
Ligand-gated channels
Glutamate (ionotropic)
124438062
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
124438062
NCBI-ProteinID:
XP_046844011
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MNFSNTSIQFEALTISMNKKPIQASLDVCDNILNKNVHAVFVINDANFTNGPAMAVSYTC
GFFQIPVIGIGIRNSVFSNKTVQPTFIRTVSPYYDQVNVWIKILKHFGWKKVLTISTGKY
ESKRALFHFVDAISDSIIKIEKSVELLQEKTNVTKELEELSNTLSRVILIFVDLQDAKII
YNELSQLLPNKKGYVWLVMENAVMDENKNIIAPQGSLSVQLTQESDLIAHLYDSVDMVTQ
TITSWVSYNNETDKKFLTNGCHSLTPWSTGKTLYQKLLNTSIPNGRTGVVKFDENGERAN
SKYRITNVQKSGLEEIGNHHEGKLNIFRPIVWPGDTTDIPKGIQSSKHMRVVTIKQHPFV
YVHENPTGKCSDLNTDVSTYVECPGKQNGVDKEHAIIEDVYCCSGFCIDLLQLLADNINF
TYEVHLSKDGKFGSYNEKPGHKDKKWNGMVEEILEDQADMIVASLTINNERAKVIDFTKP
FKYEGKTILVKKNEKSSSLGSFLRPFRIELWLLVLLSVHVVAVFLYLLDRFSPFGRFQMA
KCDREDTPLNLTSAMWFAWGVLLNSGIGEGTPRSLSARVLGMAWAGFAMIIVASYTANLA
AFLVLDRPMSVVSGIDDPQLRNPTSHFKYGTVANSSVESYFRRQEELSTMAKFMDSYNVD
SVDDGVQAVRDGELKAFIWDSPVLYYETTKDCSLTTAGELFGRSAYGVGLPKNSPWTNEV
SLAILNFHESGKMEDLETLWIETGACAENTNVSTTLGLGHMMGVFFMMLAGIGAVFIIIV
FELLYYKHQFWRAELRNRETKTTADRKNDMRRKNDEGNDKNVKENGHYRRNEDIARTNPV
FITDAQLY
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgaatttctcaaacacgtcaatacaatttgaagctctaacgatctcgatgaacaagaag
cctatacaggcttctctcgatgtctgcgataacattctcaataaaaacgtccatgctgtt
tttgttatcaatgacgccaacttcactaatggccctgctatggctgtctcctacacttgc
ggattctttcaaattccagtgattggaattggcattagaaattctgtcttttctaacaaa
accgtacaacccacattcataagaacggtcagtccatactacgatcaagtaaacgtttgg
ataaaaatcttgaagcattttggatggaaaaaagtattgacaatctcaacaggcaaatat
gagtcaaaacgtgctctatttcactttgttgatgcgatatcagatagtatcattaaaatc
gagaaatccgttgaacttctacaagaaaaaaccaacgtcacaaaagagctggaagaactc
tcaaataccctttcacgagtgattcttatttttgttgaccttcaagatgcaaaaatcatt
tacaacgaactctcgcagcttttgccaaacaaaaagggatatgtatggttggtcatggaa
aacgcagtgatggacgagaataaaaatattattgccccacaaggttcgctcagtgtacaa
ctaacacaagaatccgacctcatagcgcatctatacgactcggtggatatggtcactcaa
actataacgtcatgggtttcctataacaatgaaacagataaaaaattcctgacaaatggt
tgtcacagtttaacaccatggtcaacaggaaaaactttgtaccagaaattactcaacaca
tccattccaaacggacgtacaggtgttgtaaaatttgacgaaaacggtgaaagagcaaac
agcaaatacagaataacaaatgtacagaaatcaggtttggaagaaataggaaatcaccac
gaaggaaaactcaatatttttcgtccaatcgtctggcctggtgacacaacagacattccg
aaaggaatacaatcgtcaaaacacatgagggtcgtcacaatcaagcaacatccttttgtg
tacgtacacgagaatccgacaggaaagtgctctgacctaaatactgacgtcagcacatac
gtggagtgtccggggaaacaaaatggcgttgacaaagagcacgctataattgaagatgtc
tattgctgttcaggtttctgcatcgacctgttgcaattgctcgccgataatataaatttc
acctacgaagttcacttgtcgaaagatggaaaatttggttcttacaatgaaaaaccaggt
cacaaagataagaaatggaatggtatggttgaagaaatactcgaagatcaagcagatatg
atcgttgcttccttaactattaacaacgaaagagcaaaagtaatcgatttcacaaaacca
ttcaaatacgaaggaaaaacgatattagtaaaaaagaatgaaaagtccagtagtttgggg
tcgttccttcgaccgtttcgaattgagttgtggttattagtcctcctttccgtacacgtg
gttgccgtctttctctatcttctcgatagatttagtccctttggacgatttcaaatggca
aaatgcgatagggaagacacacctttaaatcttacaagtgccatgtggttcgcatgggga
gtattactgaacagcggcattggggaaggtacacctcggagcttaagcgcaagagttctt
ggcatggcgtgggcagggtttgcaatgattattgtcgccagctatactgccaatctcgct
gcattccttgtcctagatcgtccaatgtcagtggtcagcggtattgatgatccacaactt
cgtaacccaacaagccattttaagtatggtacagtggcaaacagcagtgttgaaagctac
tttcgacgtcaagaagaactttcaacaatggctaaatttatggattcatataatgttgac
tcggtcgatgatggtgtacaggcagttcgtgatggagaattaaaagcgttcatttgggat
tcgcccgttttgtactatgaaacaacaaaagattgctcgcttactacggcaggggagcta
tttggtcgttcagcgtacggagttggactcccaaaaaattcaccatggacaaatgaagta
tcacttgctattctcaatttccatgaaagcggcaagatggaagatttggaaactttatgg
attgaaactggagcatgtgcagaaaataccaatgtttcgacaacgctaggtctcggtcac
atgatgggtgtatttttcatgatgttggctggaattggagccgtctttattattattgtc
tttgaattactttattacaaacaccaattttggcgtgcagaacttaggaatcgtgagacg
aaaacaaccgctgataggaaaaatgacatgcgcagaaaaaatgatgaaggtaatgacaaa
aatgttaaagaaaatggtcactacagaagaaatgaagatatcgcaagaaccaatcccgtt
tttatcacagacgcacaactttactaa
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