Xenia sp. Carnegie-2017 (soft corals): 124439997
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Entry
124439997 CDS
T08024
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124439997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124439997
Enzymes [BR:
xen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124439997
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124439997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
124439997
NCBI-ProteinID:
XP_046846262
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MMEDESERQSFPSLKTLTSSDYRNLKNEQMKTVQDLYLPHIESFNFLIEGGLDLAVQDIF
PESFELPNGQKVLIYFTGAIVGKPTIPEENVHSKSTKMFPAECRQRGTTYNAKLQVSIQW
KVDNQICGNLVKSIAMLPIMVKSKCCSLYGLKPKDLVANHEEAEEGGGYFIINGLEKVVR
MLILPRRNYPLALVRASWKKRGPLFTEYGVQIRCVQKDQTGNSMVLHYLTDGTCSLSFSY
NKEQFFMPVMLILKALYDTTDLHIYKELTKGEETNIFLKDCVATMLRQVQDKELTSRTKI
LKYFGERFRVKFSLPECYTDIFVAKFLIRKCICIHLESHVDKFNLLVFMIKKLYALAMEK
CAPESADSLMNQELLLGGHFYLMFLKEKLELWLRSLRFALEKDIQKNSHDFSLNINSVLK
AMTSCLNLTNQINYLLATGTLRSKSGLGLMQVAGYTVVADKLNYYRYLSHFRCVHRGAFF
AQMRTTTVRKLLPETWGFLCPVHTPDGSPCGLLNHLSATCEVVNAQCNTSNFPRLLCSLG
MTPLDCPRSQSASSCYHVLLDGKVLGFIEEQWIDVLVKRLRMLKTEQLEQVPKHLEICMV
PFTESASQYPGLYLFTTPARMMRSLLNVAVGKPEMIGTFEQVYLDVAIIPEEVYAGITTH
MEITQTGFLSAIASLTPYSDFNQSPRNMYQCQMGKQTMGTPCHSIPNRGDNKLYRIQTPQ
TPLVRPKSHQDYNVDDYPLGTNAVVAVVSYTGYDMEDAMILNKASYERGFAHGTIYKTEI
VDLSKHSNNSRNVTLIFGCLPGDKLLASGKLDQDGFPPIGTKLEMGDPCYSYIDLTTGAT
KVKYYTYMEAAYLDSVKFLGNDCGDGELQRVSLKWRIQRNPIIGDKFSSRHGQKGICSQK
WPAENMPFSESGMTPDIIFNPHGFPSRMTIGMMIESMAGKSASMHGLVHDATPFTFSEDV
SAIDYFGKMLIEAGYNYHGTERLYSGITGKEFEANIFFGIVYYQRLRHMVSDKYQVRATG
PVDILTQQPVQGRKRQGGIRFGEMERDALLAHGTSFLLQDRLMNCSDRSEGHVCVKCGSL
LSPIFDKCSTEMAAVSSNRTRKWRCKTCETSEHIKVLSLPYVFRYLVAELGAMNIKVSLD
VK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgaaagtgaacgacaaagttttccgtcattaaagactctcacttcatct
gattacagaaatttaaaaaatgagcaaatgaagacagttcaagatttgtatttgccacat
atagaatcgtttaattttctcatagaaggaggtctagatctagcagttcaggatatcttt
ccagaatcatttgagcttccaaacgggcagaaagttttaatctatttcactggagccatt
gttggaaaacctacaataccagaagaaaatgttcattccaaatcgacaaagatgtttcct
gctgagtgccgtcaaagaggtacaacatataatgccaaacttcaagtgtctattcagtgg
aaagttgataatcagatttgtggtaatcttgtcaaaagtattgccatgttgccgattatg
gtgaagtcaaagtgctgttcgctgtatggcttaaaaccaaaagatcttgtggccaatcat
gaagaagctgaggaaggtggcggttatttcattataaatggtctcgagaaggttgttcga
atgctgattcttcctcgaaggaactatccgttagctctcgttcgtgcgtcgtggaaaaag
cgtggtcctttgtttacagaatatggtgtgcagatccgctgtgtgcagaaagatcaaact
ggcaatagcatggtacttcactatttgactgatggcacctgctctctatcgttctcgtac
aacaaggaacagttttttatgccagtaatgttaatattgaaggctttgtacgatacaacg
gatctacatatttacaaagagcttactaaaggcgaagaaacgaacatttttctaaaagat
tgcgttgcaaccatgttaagacaagttcaagacaaagaacttacgagtcggacgaagatc
ttaaaatattttggtgaaagatttcgcgtgaagttttcccttcctgaatgttatacggat
atctttgtggctaaattcttaattcggaagtgtatttgcattcatctggaatcacacgtc
gataaatttaatctacttgtgtttatgataaagaagctgtacgcattggctatggaaaaa
tgtgctcctgaatctgctgacagtctgatgaatcaagaactacttcttggtggccatttt
tatctcatgtttttaaaagagaagcttgaactttggttgaggtctttacgattcgctctg
gagaaagatattcagaaaaattcccacgatttttctttaaacattaattcagttctcaaa
gccatgacttcttgcttaaacttgactaatcaaataaattatctcctggcaacgggaacg
ttgcgcagtaaatctggccttggcttgatgcaggtggcaggttatacagttgttgcagat
aaacttaactattacagatacttgtcacattttcgttgcgttcatcgtggtgctttcttc
gctcaaatgagaaccacaactgtacgaaaacttttacccgaaacttggggatttctatgt
cctgtgcatactccagatggttctccttgtggattattaaatcatttatcagctacatgt
gaggtcgtgaatgctcaatgtaatacaagtaattttcctcggttgctgtgttcacttggc
atgactccattagattgtccaagatcacaatccgcttcttcctgttatcatgtcttattg
gacgggaaagttttgggttttattgaagaacaatggatcgacgttttagtaaagagactg
agaatgttaaaaactgaacaattggagcaggttcccaaacatttagaaatttgcatggtt
ccattcaccgaaagtgcgagtcaatatccgggactttatttattcacaactcctgcaagg
atgatgcgatctttgctcaatgtggcagtcggtaaaccagagatgattggtacttttgaa
caggtttatctcgatgttgcgattatacctgaagaagtttatgctgggattactacacat
atggaaataacacaaacaggatttttaagtgccattgcaagcctaacgccatactcggat
tttaaccaaagtcctaggaatatgtatcaatgtcagatgggcaaacaaacgatggggaca
ccttgccactcaataccgaatcgtggcgataataagttatatcgaatacagactcctcag
acaccgctagtaagaccaaagtctcaccaggattataatgttgatgattatccacttgga
accaacgctgttgttgcagttgtatcatacactggttatgatatggaagatgccatgata
ctgaacaaagcttcttacgaacgaggctttgcccatgggacaatttataaaaccgagatt
gttgatctttcaaaacattcaaataactcgcgaaatgtcacacttatatttggctgtctt
cctggtgataagctgcttgcttctggcaaattagaccaagatggttttccaccaattgga
actaagctggagatgggtgacccctgctatagttatattgatcttactacgggtgcaacc
aaagtgaaatattatacttacatggaagctgcctatttagattctgtgaaatttctcgga
aatgattgtggtgatggtgagttgcagagagtttcgttaaaatggcgaatacagagaaat
cctattattggtgacaagttttcaagtcgtcatgggcagaaaggtatttgcagtcaaaag
tggcctgccgaaaacatgccgttctctgaatcaggaatgactcccgacatcatttttaac
cctcatggctttccatctcgtatgactattggaatgatgatcgagagcatggctggaaag
tcggcaagtatgcatggcttggtgcatgatgctactccatttacgttttctgaagatgtt
tctgccattgattattttggaaagatgttaatagaagctggctacaattatcatggtacc
gaaagactttacagtggtatcacggggaaagaatttgaggccaatattttctttggtatc
gtttattatcaacgtcttcgacatatggtgtctgataagtatcaggtgagggcaactggt
cctgtcgatatcctaactcaacagcctgtacaaggtcgaaaacgtcaaggaggaatacgt
tttggtgaaatggaaagagatgcattacttgctcatggaacttctttccttttacaagac
agattaatgaattgttctgaccgatcagagggtcatgtttgtgtcaaatgtggcagtctt
ctctctccgatttttgataaatgctctacggaaatggctgccgtctcttcaaataggacg
agaaaatggaggtgtaaaacttgtgaaacgagtgaacacataaaagttttgtctttacct
tacgtcttccgttatcttgtagcagaactgggtgcgatgaatattaaagtatctttagac
gtgaagtaa
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