Xenia sp. Carnegie-2017 (soft corals): 124448495
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Entry
124448495 CDS
T08024
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124448495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124448495
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124448495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124448495
NCBI-ProteinID:
XP_046855749
LinkDB
All DBs
Position
Unknown
AA seq
2406 aa
AA seq
DB search
MANVATENWEMLCDETRLSRTVLSSIADSSEEGKLALKEISDYVSREKFNKEKLVSNLQN
LRRSRVNADQQFNQLEKQLISCNSKLEQETKSNEDLKKRLEETVEALALKSRHLSEVESS
KDEALTNLSKVSLQNESLEGEKINFVTTLQRKNQEIDRLNEEWKTMFEKVSHANNLQCEA
KVKLDELTSKETSYQLKERRLVEEKELLMKQKDWFETQLKEKSEAYFTLRKEKSLTIAQL
QTSLDAKIDEANKLETLNENLKKENEDLKTNLNTFVDKLKETRDHYAKTEEHYKLELASQ
SKLALLYKDSSESSKSKCDELVSAVEELQKLLNEANENRVEVEGKFSESEANQENIVKEY
DEKIQTLENELKNANDLLEAARQRGMAPMSAETLAALSPTAAATSAFLKSGMTLTQIYNQ
YIETLDSLEIEKVENGRLKGYLDDILKDIEEKAPLLQEQKKDYEAALITIDKLTTKLENA
MKEMENFSMETSEAVQKSEHLRRENERMKILTADLASQVKVLLKECEEARGSVVSTTSSM
GLDELTQSYNEVSSSSEVISKRLVTFRNIEELQEQNQRLLTVIRELSEEKEKEEQREKDN
KIQIDMKRKLDEALQELEELKDSRQRQTSMVEAVVRQRDMYRVLLANNGHTPIKPRQLLD
ESQNYGESSKTDETGNALRELQKQFEAYKNERLANETEIKEKNEELQSTIAQLNIKNAQI
ISQLEHANDRCKLLDNNNVSLKREADALRDKCEKMSLSCAKMEVSCENSKQEMMETKERL
MRSEVMYENLTEEKNILKQAEARLLEENKSLVKQQKGQNVLLTNLQTIQNNLERQEYDTR
SRLTSQIDRLEQEIVVLKQNLKHEKEQNDDLITSLKGEIAEEKRKVENGSILQKEAENLV
ETLKSDLNDVNARLSEKESLLSASEARLNEILNRNASENQDDPYLQTLKDKEEEHAIEME
KMTNKFNEAEARNSVLENQITLSKKHLEQYKSMLSANEEALTELNNTSKLFEEKCENEQK
EKEKEVASLMKSLTSSQERITILTTENEKLKEQLMKETESLHKTIDILTSEAKEAVKRAE
LSLEQEKRTSEICEEQKALAAETQGKYQNELLHHASDVQALTTAKQQLEDVELRLAEAEM
NNKRAESSLNECKASWEEKYRLQAQELSNIVSRCEELTNQNALLHEQGEKLSRQVLAAQN
RSMNDGNVESKMLESAQQSDNRTVNDLWEVIRFVRKEKDIAETKSELLQSECVRNEQRLQ
FIEKQLRDTESLLEKEKERTKSLPVDDAEYEEIMKKVKMFTEVEETNKILCSEKETLQNK
VEEIEDRMKKSESKMISLEQNLKNLTEQKDTLVGEKTGMKNEIQRWRNRVNQLTEQTKNQ
GDPDEIKKLQEEKKQMASQHKSALDEVEKSKARMEAMRNEITRLQAEINVMKTENSKTQE
ELKNSKSTSTAALASLSEEKEKLEKEVKTKMEELQEKAKFILQLKKLAKRYKTQYDEVVA
EKEVLNKKLSEEKPESDVLKQDETIQTLNSEKISLQQEIEKLNQNLTTFKENEDKSKKTL
SSATKRIRQLMTAKEKLTNEVDELKKSMEKVREESEAASSEREMRLSALSTQFEGKQSRM
EKELKEKNELIEKYKEEKAKMDEREKEKDSELEKQKKRLQQFERVNRQAQQKIKSQATTI
ATLTALQSSGTASCAGGNTGVSEDTTQVNTTLPPTAAVKPTATSSTPSSVRSIVTPTASI
RPMTSATVQATPRATVPPTVTAQPSVSPIVNTQSTISPTIATHVAVATSASTQVALPFNM
TSQSLVTSPTSVTTQSAVSVTVTTQATPSLNIISQSTSTPIVHPLPSVSTVVTSSATELL
TTPVRPMASSVMVTMTSTQNIEDRTFEIVSDERPSTSGESQLTVTELSSDEGAISKTSKD
VRVANKRSRDYESSSESSLGVQEAKKSKRETVPEVSDVIDEEDVLDVMADDDDPIEEGEM
SKHVVGELKPHEVEEKREVVFIDDESEEDDESNNGDEADDDDRKDDIDQQIDIDEDEVVE
VIDDDCDDVDDIDIKEELADEDTNEAREVTEEECDRTLLHTENVESTSCLGERPSQSQRI
RDVVITTQSVSIITQQPFIRSQSHLAPFSLTQAQSSSGGFDETDDCTVPSTPTLFIPKRT
DGFGEMISSPRVHHPSFLFGSTSESNQSDGLAMGMSEEGLRVDDTRFDIMASSGENEDSD
LILDNVVPDLDEATAVQLTSDDDAGESSVITAITNTDISEQNVPETGEKFECTDIVESGT
EGTKDEQIASSIPEQKTEIKEPEEASSSSSNSASLDSQESGTKETEERQSTTVFEPSTSR
GKATTITQARAKSTVVQLRRPLPQTSSADDVRPAVRGRRQIRRNQGRGQSARGLIRRGRA
RQRDNL
NT seq
7221 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtagctacagaaaattgggaaatgttgtgcgatgaaacacgactttccagg
acagtcttgtccagtattgcagatagtagcgaggaagggaagttggcattgaaagaaatc
agtgattatgtatcacgagaaaaatttaacaaagagaaattagtctcaaatcttcagaat
cttcgtcgttcacgtgtcaatgcagatcaacaatttaatcaacttgaaaagcaattgatt
tcatgcaatagtaaattggaacaagaaacaaaatcaaatgaagatttaaagaaacgtttg
gaagagacagttgaagcattggcattgaaatccagacatttaagtgaagtagagtcatca
aaagacgaagcacttacaaatctttccaaagtctcactccaaaatgaaagtctggaaggg
gagaaaataaactttgtgaccacattgcagagaaaaaatcaggaaattgacagactcaat
gaggaatggaaaacaatgtttgaaaaagtgagccatgcaaataatctacaatgtgaggca
aaggtcaaattggatgaacttactagtaaagaaacatcttatcagcttaaagaaagaaga
ctagttgaggagaaagaacttttgatgaaacaaaaagactggtttgaaacacaattaaaa
gaaaagtctgaagcttatttcactttgaggaaagaaaagagcttaactattgcccagctg
caaacatcattagatgcaaaaattgatgaggcaaacaaattagagactttaaacgagaac
ttgaaaaaagagaatgaggacttaaagactaaccttaacacttttgttgataagttaaaa
gaaacacgtgaccactatgcaaagacggaggaacattataaactggaactggcctctcag
agtaaacttgctctattatacaaggattcttctgaatcgtcaaagtcaaaatgtgatgaa
cttgtgagcgcagtggaagaacttcaaaagttattaaatgaagcaaatgaaaatcgtgtt
gaagttgaaggaaaattttctgaaagtgaagccaatcaagaaaatattgttaaagaatat
gatgagaaaatacaaacgctggagaatgaattaaaaaacgccaatgatttactagaagca
gctcgccaacgaggaatggctccaatgtcagcagaaactctagcggctctctctcctaca
gcagctgctactagcgctttcttaaagtcaggaatgacattaacgcagatttataaccaa
tacatagagactcttgattctctggaaattgaaaaggtcgagaatggtcgtttgaaaggc
tatcttgatgatatattgaaggatattgaagagaaagccccattacttcaagaacaaaaa
aaagattacgaagctgctctcattaccatcgataaattaacgacaaaacttgagaatgca
atgaaggagatggaaaatttcagcatggaaacaagtgaagcagttcagaaatctgaacat
ttacgacgtgaaaatgaaagaatgaaaattctgacggcagatcttgcttcacaggttaag
gtgttgcttaaagaatgtgaagaagcaagaggctctgttgttagcactacatcaagtatg
ggcttagatgaacttactcaatcttacaacgaagtatccagctcttcagaagttatttcc
aaaagacttgttacattcagaaatattgaagaacttcaagaacaaaatcaaagattgttg
acagtgattcgagaactcagtgaagagaaagaaaaagaagaacaaagagagaaggataat
aaaattcaaattgatatgaaacgtaaactggatgaagcattacaagaacttgaagaattg
aaagatagtcgtcaaagacaaacatcaatggttgaagctgttgtgagacaacgagatatg
tatcgtgttttactggcaaataatggtcacactccgattaaacctcggcaattgttggat
gaaagtcagaattacggagaatcttcaaaaacggacgaaactggcaatgctttgagggaa
ttgcaaaaacaatttgaggcttacaaaaatgagagattagccaatgaaacggaaataaag
gaaaagaatgaagaactacagagtactattgctcaattgaacattaaaaatgcccaaatc
atttcacagcttgaacacgccaatgaccgttgcaagctgctggacaataataatgtcagt
ttgaagcgtgaggcagacgctttacgagataaatgcgagaagatgtctttgagctgcgcc
aaaatggaggtttcgtgtgagaacagcaaacaggaaatgatggaaacgaaagaaagatta
atgagaagtgaggtgatgtatgagaatttaacggaagaaaaaaatattctaaagcaagcg
gaggcaagacttttagaagagaataaatctttagtgaagcaacaaaaaggacagaatgtt
ttgttgaccaatcttcaaacaatacagaacaatcttgaacgacaagagtacgatacacga
tctcgtcttactagtcaaattgataggcttgaacaagaaattgtcgttcttaaacagaat
ttgaaacacgaaaaagaacagaatgacgacctgattacatcgttgaagggtgaaattgct
gaagaaaaacgaaaggtagagaatggaagtattttacagaaggaagcagaaaatcttgtg
gaaacactgaaatctgacttaaacgatgtaaacgcccggttatcagaaaaagaatctttg
ctgtctgcaagcgaggcaagactgaatgaaattttaaatcgaaatgctagtgaaaatcaa
gatgacccgtatcttcaaactttaaaagacaaggaagaagaacatgctatagagatggag
aaaatgacaaacaaatttaacgaagcggaagccaggaatagcgttttagagaatcaaata
acgctttcgaaaaaacatttggagcagtataaatctatgttgtctgcgaatgaagaagca
ttgacggagctcaataatacaagtaaattattcgaagaaaaatgtgaaaatgaacaaaaa
gagaaagagaaagaagttgcatctttgatgaagtcactaacgtcttcacaagaaagaatc
acaatcttaacaacagaaaatgaaaaattgaaggaacaattaatgaaagaaacagagagc
ttacataaaactatcgatattttaacatcagaagccaaagaagctgtaaagagagcagag
ctttcacttgagcaagagaaaagaacttcggaaatttgtgaagaacagaaagcattagcg
gctgagacgcaagggaaatatcaaaacgagttgttgcatcatgcttcagacgtgcaagcc
ttgacaacagcaaaacaacagttagaagatgttgagttgcgtcttgcggaagctgaaatg
aataacaagagggcagaaagcagtttaaatgaatgtaaagcatcttgggaagagaaatac
cgacttcaagctcaagaacttagtaatattgttagtcgttgtgaagaactaaccaatcag
aacgcattacttcatgaacaaggagaaaagctttcacggcaagtcttggcggcccaaaat
cgctccatgaatgatggaaatgtcgaaagtaagatgcttgaatcagctcaacagtcagat
aatcgaactgtcaacgatttatgggaggtgatcaggtttgtccgtaaagagaaagatata
gcggagacaaaaagtgaactgctgcaatcagaatgtgttagaaacgaacaaagacttcaa
tttattgagaagcaacttcgcgatactgaatcattacttgagaaagaaaaagaaagaacg
aaatcgttgcctgttgatgacgcagagtacgaagagatcatgaagaaagtaaaaatgttc
actgaagtggaggaaacaaataaaattttatgcagtgaaaaggaaactttacaaaataaa
gtggaagaaattgaagatcggatgaaaaagtcagaaagtaaaatgatttctttggagcaa
aatttgaagaatttaacggaacaaaaggacactttggttggtgaaaaaactggaatgaaa
aatgagatccaacgctggcgaaatcgtgtgaatcagttgacagaacaaactaaaaatcaa
ggagatccagatgagattaagaaattacaagaagaaaaaaagcaaatggcatctcaacat
aaatctgctttagatgaagtagagaaatccaaagcaaggatggaagctatgcgtaatgaa
atcacaaggctacaggctgaaataaatgtgatgaagacggaaaacagcaaaactcaagaa
gaattgaagaattcaaaatcgacgagcacagccgctttagcaagtctgtctgaggaaaaa
gaaaagttggaaaaagaagtgaaaacaaaaatggaagaattacaggagaaagcaaagttt
attctacagttaaagaaactcgcaaagcgttacaaaacacaatatgacgaagttgtagcg
gagaaagaagtattgaacaaaaaattatcagaagaaaaacctgagtcagatgttttaaaa
caagatgaaacaatccaaactttgaactcagagaaaatttcattacaacaagaaatagaa
aaattaaatcagaacttgacaacattcaaggaaaatgaagacaaatctaagaaaactttg
agttcagccacaaagcgcattcgtcagttaatgactgcgaaagaaaaattaacaaatgaa
gttgatgagttaaagaaatcaatggaaaaagttcgagaagaaagtgaagctgcaagcagc
gaacgtgaaatgcgtttaagtgctttatcaacacagtttgaaggtaaacaatcgcgaatg
gagaaagaacttaaagagaagaatgaacttattgaaaaatacaaagaagaaaaagcaaag
atggatgagagagaaaaggaaaaagatagtgaactggaaaaacaaaagaagcgacttcag
caatttgaacgtgttaatcgtcaggctcaacagaaaattaaatcccaagctaccacaatt
gctacattgactgctttacaatcatctgggacagcatcttgtgctgggggaaacacgggt
gtaagtgaggatacgactcaagtgaatactactttacctcctactgctgccgtcaaacct
actgcaacatcctctacaccttcttctgtacgatccattgttactcccactgctagtatt
cgtccaatgacttcagctacagtgcaagctacaccaagagcaacagtacctccaactgta
actgcacaaccttcagtttcccctattgtcaatacacagtcaacgatatcccctactatc
gctacacatgtcgcagtagccactagtgcaagtactcaagttgctctaccatttaacatg
acgtcacaatcattagtaacttcaccaacgtctgtcacaacacaatctgcggtttctgtt
actgtcacaacacaagccactccatccttgaatatcatatcgcaatctacgagtacccct
attgtccatccattaccttctgtctccactgttgtaacgtcgtctgcaacagaacttttg
acaacacctgtcagaccgatggcctcttctgttatggtaactatgacatcaacacaaaac
attgaagacagaacatttgaaatcgttagtgatgaacgtccatcgacttctggtgaaagt
caacttaccgttactgagttgagttctgatgaaggtgctatctccaagacaagcaaagat
gttagagttgcaaataagcgatcacgtgactatgaaagctcatcagagtcttcactcgga
gttcaagaagccaaaaagtcaaaaagagaaactgttcctgaagtgtctgacgttatcgat
gaagaggatgtacttgatgtaatggcagacgacgatgatcctattgaagaaggggaaatg
tcaaaacatgttgtcggagagctcaaacctcacgaagttgaagaaaaaagagaagttgta
tttatcgatgatgaaagtgaagaagatgatgaaagtaataatggagacgaagctgatgat
gatgatagaaaagatgatattgatcaacagattgacattgatgaagatgaagttgttgaa
gttattgatgatgattgtgatgacgttgatgatatagatattaaagaagaacttgctgat
gaagatacaaacgaagcaagagaagtcactgaagaagaatgtgacagaacattattacac
accgaaaatgtcgaaagtactagctgtcttggtgaaaggccatcacaaagtcagagaata
cgagatgttgtgataacaactcaaagtgtatctattataacacaacaaccatttattcgt
tcccagtctcatcttgcacctttctcattaacgcaggctcagtcaagttctggaggtttt
gatgaaactgatgattgtacggttcctagtactccaacgttatttataccaaaacgaact
gatggttttggtgaaatgataagttctccacgtgttcaccatccttcatttttgtttggc
tcgacaagtgagagcaaccaatctgacggtcttgctatgggaatgtcagaagaaggtctt
cgtgtggatgatacgagatttgatattatggcttcatcaggcgaaaacgaagatagtgat
cttattcttgataatgttgtccctgatttagatgaagcaactgccgtccagttgacgtca
gatgatgatgctggagaatcttctgtgattactgctataacaaatactgatatttctgaa
caaaatgtgccagagactggggagaagtttgaatgtacagatatagtggagtctggaaca
gagggaactaaggatgagcaaatagcgtcttcaatacctgagcaaaaaactgaaataaaa
gaacccgaggaggcaagctcgtccagtagtaactcagcatcattagatagtcaggaatct
ggtacaaaagaaacggaggaacgacaatcaactacagtatttgaaccttcgacatctaga
ggcaaagcaacaacgatcacacaagctcgagctaagtcaacagtcgttcaactaagaaga
ccacttcctcaaacatcttcagcagacgacgttcgaccggccgtacgtggacgtcgacaa
atacggagaaatcaaggtcgtggtcaatcagctcgaggcttgatacgacgaggtcgtgct
agacaacgtgataacttataa
DBGET
integrated database retrieval system
