Xenia sp. Carnegie-2017 (soft corals): 124449552 Help Entry 124449552         CDS       T08024                                  Name (RefSeq) DNA ligase 1-like isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism xen  Xenia sp. Carnegie-2017 (soft corals) Pathway xen03030   DNA replication xen03410   Base excision repair xen03420   Nucleotide excision repair xen03430   Mismatch repair Brite KEGG Orthology (KO) [BR:xen00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     124449552    03410 Base excision repair     124449552    03420 Nucleotide excision repair     124449552    03430 Mismatch repair     124449552  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:xen03032]     124449552    03400 DNA repair and recombination proteins [BR:xen03400]     124449552 Enzymes [BR:xen01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      124449552     6.5.1.6  DNA ligase (ATP or NAD+)      124449552     6.5.1.7  DNA ligase (ATP, ADP or GTP)      124449552 DNA replication proteins [BR:xen03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     124449552  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      124449552 DNA repair and recombination proteins [BR:xen03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      124449552    NER (nucleotide excision repair)     Other NER factors      124449552    MMR (mismatch excision repair)     Other MMR factors      124449552 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Motif Other DBs NCBI-GeneID:  124449552 NCBI-ProteinID:  XP_046856442 LinkDB All DBs Position Unknown AA seq 877 aa AA seqDB search MPQRSISSFFTSKPKVTDESNDTENRKAIHKGSNVDTSPVKKTKKKNRNKVLSDSDNEEC DESGNCQETNGKKGELVQNSSLEDDNGEVGSVKEASSSSGEKKPPKRKTARKHMRKRKAD ENSSSNSSESHEEIQTKKLKVCDDDVMKCEPKEECENRKESTLSESENETMSGSKPNGNT TSKTTGKLSKTVDYFFEQGPKEDEKNETLTDDEEIVDPVVYNPEKNCYHPLKHACWKHKE RVPYLALARTFQCIESTSARLKITSTLSNLFRSVIALTPQDLLPCLYLCLNKLAPSYEGI ELGIGDGLLIKVIAETTGRSTQQVKLEFGEKGDLGIVAEASRSTQRTMFTPAKLTVSTVY NKLKEIALMTGHSSVNRKADKVKSMFVACRQSEARYLTRSLAGKLRIGLAEQTVLTALAH AVVLTPPSNDFPPETLDASKGIPAEAFKKKLDAAALIVKTCYCELPNYDVLVAALLEHGL KELSKHCHITPGVPLKPMLAHPTKGVEEVFKRFEDASFTCEYKYDGERAQIHVLNRNDIR IYSRNQENNTSKYPDVVARMAKVLKEDVTSCIIDSEAVAWDQEKKQILPFQVLSTRKKKD AEASEIKVQVCIYAFDLLYLNGKSYVKEPFKVRRDILRSSLNEIDGEFIFAKCITSTDTD DIAEFLDESIKGNCEGLMVKTLEVDATYEIAKRSHNWLKLKKDYLEGVGDTLDLLVIGGY MGKGKRAGRYGGFLVACYDEDKEEYQSCCKVSTGMKDEDLDRQYTILQEYIIGQPKPYYR FDSSIEPDVWFDAVKVWEIKCADLSISPVHKAAAGIVDAEKGISLRFPRFIRERDDKKPE QVTSSVQIADMYRNQDTVKNNREASDKTNKDDYDDFY NT seq 2634 nt NT seq  +upstreamnt  +downstreamnt atgcctcaacgaagtatatcatcattttttacatcaaaacctaaagtgacggacgaaagt aacgacacagaaaaccgaaaggcgatccataaaggtagcaacgtcgacacttcgcccgtc aaaaaaaccaaaaagaaaaataggaataaagttttaagtgatagtgacaacgaggagtgt gatgaaagtggtaattgtcaagagacaaatggaaagaagggtgaattagttcaaaattcc tcacttgaagatgacaatggtgaagtgggaagtgtgaaagaagcttcctcttctagtggt gagaaaaaaccacccaaacgaaagactgcacgtaaacacatgcgaaagagaaaagcagac gagaacagctcgagcaacagctcagaaagtcatgaggagattcaaacaaaaaaactgaag gtttgcgatgatgatgtaatgaaatgtgagccgaaggaggaatgtgaaaataggaaagag tctactttgtcagaaagtgaaaatgaaacaatgtctggttccaaaccaaatggaaacaca acatcaaagactacaggcaagctatcaaaaacagttgattatttttttgaacaaggaccc aaagaagatgagaaaaatgaaacacttacagatgatgaagaaattgttgatcctgttgtg tacaatccagaaaagaattgctaccatcctttaaaacatgcatgttggaaacacaaggaa agagttccatacttggctcttgcaagaacatttcagtgtattgaaagcacttcagcgagg ttgaaaatcacctctactttgtcgaatctctttcgttccgtgatcgccctaactcctcaa gacctactgccatgtttatatctatgtttaaacaagcttgctccatcttatgaaggtatt gaactgggtattggcgacggtttgttgattaaagttatcgcagaaacgacaggtcgcagt acacagcaagtaaaattggagtttggtgaaaagggagatttaggaatcgtagctgaggcc agtcggtcaacgcaacgaacaatgttcactccagccaagttgacagtttccacagtttac aataaattgaaggaaatagcgttgatgacgggacattcgtcagtcaaccgcaaagccgac aaagtaaaaagtatgtttgttgcatgtagacagtctgaagcaagatatttgacaagatct ttggccggtaaacttcgcattggcctggcagagcaaacagtccttacagccctagctcat gcggtcgttctaactccaccaagtaacgatttcccaccagaaacattagatgccagtaaa ggcattcccgccgaggcattcaaaaagaaactggacgcggccgccttgattgtgaagact tgttactgcgaacttccgaactacgatgttctcgttgctgcccttcttgaacacggctta aaggagctatcgaagcattgccatatcactcccggcgttccattgaaaccaatgttggct catcctacgaaaggcgtagaggaagtgttcaaaagatttgaagatgcttcgttcacttgt gaatataaatatgacggggaaagagcgcagattcatgttctaaataggaacgatattcga atatacagtcgtaaccaggaaaataacacttcaaaatatccggatgttgttgcccgaatg gccaaggttttgaaagaagatgtgacttcttgtataattgattcggaggctgttgcatgg gatcaagaaaagaaacagattttgccttttcaagtcttgagtacaagaaagaaaaaggat gcggaagcttccgaaatcaaagttcaagtgtgtatttatgcttttgatctcctttatctc aacggaaagtcctatgttaaagaaccttttaaagttcgacgcgacatcttgagatcatct ttgaatgaaattgacggagaattcatttttgccaagtgcataacgtcgaccgatacggat gatattgcggagtttttagatgaatcaattaaaggaaactgtgaaggtttaatggtaaag acgctggaagttgatgcgacctatgaaatcgcgaaacggtcgcataactggctaaagctg aagaaggattatctggagggtgttggggacacgttggatctgttggtgataggagggtac atgggtaaaggcaagcgagcaggacgctatggtggtttcttggttgcttgttatgatgaa gataaagaagaatatcaatcatgctgcaaggttagtactggaatgaaagatgaggatctt gatagacaatacactattcttcaagaatacatcattggtcaaccaaaaccttattatcgt tttgattcaagcattgagccggatgtttggttcgatgctgtcaaggtttgggaaataaaa tgtgctgatctttccatctctcccgttcacaaagcggctgcaggcatagtagacgctgaa aaaggaatttctttgcgctttccgaggtttatccgagagcgtgacgacaaaaagcccgag caggttacgagcagcgttcagatcgctgacatgtatcgtaatcaagacacagtaaaaaac aaccgcgaagcctcggacaagacaaacaaggatgactatgacgatttttactga

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