KEGG   Xylella fastidiosa subsp. fastidiosa GB514: XFLM_03095
Entry
XFLM_03095        CDS       T01979                                 
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xff  Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff00740  Riboflavin metabolism
xff01100  Metabolic pathways
xff01110  Biosynthesis of secondary metabolites
xff01240  Biosynthesis of cofactors
xff02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xff00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XFLM_03095
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XFLM_03095
Enzymes [BR:xff01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XFLM_03095
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XFLM_03095
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: ADN62614
LinkDB
Position
complement(640831..641925)
AA seq 364 aa
MSAFSADDHRHMERALCLAERGAYTTRPNPMVGCVIVRDGEVVGEGWHQRAGDPHAEVFA
LCAAGDRARGATAYVTLEPCAHSGRTPPCAMALIDAGVRRVVAAMVDPFPLVNGGGVTLL
RAAGVTVEHGLMEAQARALNRGFLSRVERGRPWVRIKLGSSLDGRTALASGESKWITGEA
ARADVQRWRARASAILTGAGTVLADDPALTVRLGGEEGAFLPPLRVVLDSSLRSLSCVKV
RDGTAPTLYLHGFGVTSPVLQHVDFSEVQQRDAGLDLEAVLRLLGERGINEVQVEAGATL
CGALLHAGLVDELLIYIAPLLLGDTARPLLAGLDIGRMDQCIGLKVLEVAQVGNDLRLLL
RPCG
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgagcgcattttccgcggatgatcaccgtcacatggaacgggccttgtgtttggctgag
cgtggtgcttacacgacgcgtcctaacccaatggtgggttgtgtgattgtgcgtgatggt
gaagtagtgggagagggttggcaccagcgtgctggcgatccgcatgctgaggtatttgca
ttgtgtgcggctggagaccgcgcacgaggtgcaacggcttacgtcacgttggagccgtgt
gcgcactcggggcgtactccgccgtgtgcgatggcgttgattgatgccggagtgagacgg
gtggtggcggcgatggtcgatccatttccgttagtcaatggtgggggagtcactctgtta
cgtgcggctggggtgacggttgagcatggtttgatggaggcgcaggcgcgcgcactcaac
cgtggctttctgtcgcgggtggagcgtggtcggccatgggtgcggatcaagcttggtagc
agtttggatgggcgtaccgcgttggctagtggcgaatccaagtggattaccggggaggcg
gcacgtgctgatgtgcagcgttggcgcgcgcgcgctagcgcgattttgacgggggctggg
acggtgcttgccgatgatccggcgttaacggtgcgcctgggtggggaggagggagcgttt
ttgccgccgttgcgggtggtgcttgattctagcttgcgttcacttagttgcgtgaaggtg
cgtgacggtactgcaccaacgttgtatctgcatggttttggggtcacgtcccctgtgttg
caacacgtcgatttttccgaggttcagcaacgtgatgctgggcttgatctggaggctgtg
ttacgcctgttgggtgagcgtggcatcaatgaggtgcaggttgaggctggggcgacgtta
tgcggggccttgctgcacgctgggttggtggatgagttgctgatttatattgcaccgttg
ttgctgggtgatacggcacggccattactggctggattggatatcgggcgcatggatcag
tgcattggtttgaaggtgctggaggtcgctcaggtcggcaatgatctgcgattgttatta
cgtccgtgtggttga

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