Xylella fastidiosa Temecula1: PD_0620
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Entry
PD_0620 CDS
T00113
Symbol
gcvP
Name
(GenBank) glycine decarboxylase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00260
Glycine, serine and threonine metabolism
xft00630
Glyoxylate and dicarboxylate metabolism
xft00785
Lipoic acid metabolism
xft01100
Metabolic pathways
xft01110
Biosynthesis of secondary metabolites
xft01200
Carbon metabolism
Module
xft_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PD_0620 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PD_0620 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PD_0620 (gcvP)
Enzymes [BR:
xft01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PD_0620 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AAO28492
UniProt:
Q87DR1
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Position
764308..767289
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AA seq
993 aa
AA seq
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MFSASHFCSGSLMMSHPLSSLRDLEYHGAFVERHIGPNDVEIAQMLRVVGYDSLESLTDA
IVPEKIRSTVALDLPKGITEEEALAKIRVIANKNRVFRSFIGQGYYGTHTPKVILRNILE
NPAWYTAYTPYQAEISQGRMEALINFQTMCADLTGMEIANASLLDEATAAAEAMSLAKRS
AKSRSDLFFVHDAVHPQTLELLRTRAEPLGIVLRVGTPEEALQVDVFGILLQYPDTFGRI
GDHRVLADAVHARGGLVAVASDLLALTLITPPGEWGADIVVGNSQRFGVPFGFGGPHAGF
MACRDIYKRSIPGRLIGVSVDAAGHPAYRLALQTREQHIRREKATSNICTAQVLLAVMAS
MYAVYHGPQGLLRIAWRTHRMAAILAAALRGAGLTVGEYFFDTLHIVGIDALAIHCAAAA
AGMNLRMIDNAQIGISLDETVTRSDVVALGQVFGVQVDVEALDAITADALPAGLLRSSAF
LTHPVFNTHHSEHELLRYLRMLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWQEFACI
HPLAPVVQWSGYRQLIDELEAMLVECTGYDAISLQPNSGAQGEYAGLLAIRAYHRSRGEE
RRNVCLIPESAHGTNPASAQLCGMQVVIIKCDRSGNVDVDDLRMKAEKYSDTLAALMVTY
PSTHGVFEEAITEICEIVHAHGGQVYTDGANMNALVGVAKPGRWGSDVSHLNLHKTFCIP
HGGGGPGVGPCAVKAHLAPFLPKTLPLPGDAAGLPVQGTQEAKVGMVSAANFGSASILPV
SWMYITMMGAAGLRKATQVALLNANYIAKRLAPHYKTLYTGRHGLVAHECILDVRSLEKV
SGVSAEDIAKRLIDFGFHAPTLSFPVAGTLMVEPTESESQQELDRFVDAMIQIRGEIAAI
EKGHLDPEDNPLKQAPHTAVQVMASQWGHAYSRELAAFPLGVLHHAKYWPPVARVDNVYG
DKHVMCACIPVEAYKEKGDSEIQDLIEEDASRC
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcagcctcccacttttgttcaggaagtctcatgatgtctcaccccctgtcttct
ctgcgtgatcttgaatatcacggtgcgtttgttgagcgccatatcggccctaatgatgtt
gagatcgcgcagatgttgcgtgtcgttggctacgattcgttggagtcgctgacggatgcc
attgtgccggagaagatcaggtcaaccgttgcgttggatttgcctaaggggatcacggaa
gaggaagcgcttgccaagattcgggtgattgccaataaaaatcgagtgtttcgcagcttc
attggtcagggctactacggcacgcatacgccgaaggtgattttgcgaaatatccttgag
aatccggcgtggtacacggcttataccccgtaccaggcggagatttcgcagggacgaatg
gaagcgctgatcaactttcagaccatgtgcgccgatctaacagggatggagatcgccaat
gcgtctttgttggatgaggcgacagctgcggccgaagcgatgagcttggccaagcgttcg
gcgaaatcgcgctcggatctgttttttgtgcacgatgcggtgcatccgcagacgttggag
ttactgcgtacccgtgccgagccgttgggcattgtgttgcgtgtgggcacgccggaggag
gcgttgcaggtcgatgtgttcggaatattgttgcaatatccagataccttcggtcgcatc
ggtgatcacagggtcttggcggatgctgtgcatgcacggggtgggttggttgcggtggcc
agcgatctgttggcgctgacgttgattacgccaccaggcgaatggggggcggatattgtt
gtaggcaatagtcagcgctttggcgtgccgtttggctttggtgggccgcatgctgggttc
atggcatgtcgcgatatatataagcgctctataccagggcgtttgattggtgtctcggtc
gatgctgccggtcatccggcgtaccgtttggctttgcagacgcgtgagcagcatattcgc
cgtgagaaggcaacgtccaacatctgtactgcgcaagtgttgctggcggtgatggcctct
atgtatgcggtctatcacggccctcaaggattgctccgtattgcgtggcgtactcaccgc
atggcggcgattctggcggcggcgttgcgtggtgccggtctgactgtcggtgagtatttc
ttcgatacgctccatattgtcggtattgatgccttggcgatccattgtgcggcggcggcg
gctgggatgaatctgcgcatgattgataatgcgcagattgggatcagtctggatgagacg
gtcacccgttctgacgtggtggctttagggcaggtatttggtgtgcaggtcgatgtggag
gcgcttgatgcgatcactgccgatgcgttgccagcggggttgttgcgcagcagcgcattt
ttgacgcatcccgtgttcaatacgcatcacagtgagcatgagttgctacgttatttgcgc
atgttggccgataaggatttggcaatggatcggaccatgatcccgttggggtcgtgcacg
atgaagctcaatgccactgctgagatgattccagtgacgtggcaggaatttgcttgcatt
catccattggctccggtggtgcaatggagcggctatcgccagttgattgatgagttggag
gcgatgttggtcgaatgcactggttacgatgcgatcagtttgcagccgaattctggtgca
cagggtgagtatgcgggtttgttggcgatccgtgcgtatcaccgttcacgtggtgaggaa
cggcgcaatgtgtgcctgattcctgagtcggcgcatgggactaatccggcgtcggcgcag
ctgtgtgggatgcaggtggtcattatcaaatgcgacagaagcggtaatgtcgatgtcgat
gatttgcggatgaaggcggagaaatattcagacactctcgccgcgctcatggtgacctat
ccgtccacgcatggggtgttcgaggaggcgattactgagatttgtgagattgtccatgcg
catgggggccaggtgtatacggacggcgccaatatgaatgcgttggttggtgtggcgaaa
ccggggcgatggggttcggacgtgtcccacctgaatcttcataagacgttttgtatcccg
catggcggcggtggtccgggtgtaggcccatgtgctgtgaaagcgcatttggctcctttt
ttacctaaaacgttgccattgccgggagacgcagcgggattgccggttcagggcacgcaa
gaagccaaggtcggtatggtgagtgcggccaattttggttcagcgtcgatcctgccggtg
agttggatgtatatcaccatgatgggggcggcggggttgcgtaaggcgacccaggttgcg
ttactcaacgcaaattacattgctaagcgcttggcacctcactataagacgttgtatacc
ggccgccatggtctggttgcacatgaatgcattcttgatgtgcgttcgttggagaaggtg
agtggtgtcagtgccgaagatattgctaaacggttgatcgattttggtttccatgcgccg
acattgagttttcccgtggcgggtacgctgatggtggagccgaccgagagtgagtcgcag
caagagttggatcgttttgtcgatgcaatgattcagatccgtggggagattgcggcgatt
gagaaggggcatcttgatcctgaggataatccgctcaagcaggcgccacatacggcggta
caggtcatggcttcgcaatgggggcatgcgtattcgcgtgagttggctgccttcccattg
ggcgtgttgcaccatgccaaatactggcctccggtagcgcgtgtggataacgtttacggt
gataagcacgtgatgtgtgcctgtattccggtagaggcctacaaagagaaaggggattct
gaaatccaggatctgattgaggaggatgcatcccgttgctga
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