Xylella fastidiosa Temecula1: PD_2072
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Entry
PD_2072 CDS
T00113
Symbol
hsdM
Name
(GenBank) type I restriction-modification system DNA methylase
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
xft
Xylella fastidiosa Temecula1
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
xft02048
]
PD_2072 (hsdM)
Enzymes [BR:
xft01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
PD_2072 (hsdM)
Prokaryotic defense system [BR:
xft02048
]
Restriction and modification system (R-M system)
Type I R-M system
PD_2072 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AAO29895
UniProt:
Q879W8
LinkDB
All DBs
Position
complement(2454521..2456902)
Genome browser
AA seq
793 aa
AA seq
DB search
MQKTQQDQSQIKWISDFIWNIADNRLRDVYVRGKYRDVILPFTVLRRLDAVLEATKDAVL
ERKKFLDAHNVVEQDGALRMAAGQAFYNVSEFTLAKLKASAAGQRLRDDFIAYLDGFSRD
VQEILTKFNFRNQIQKLVDSHVLGYLIEDFLDPEVNLAPLPVKDADGRIKLPALDNHGMG
TVFEELIRRFNEDNNEEAGEHFTPRDVVQLMAKLLFLPVAERIESSTYSLYDGSCGTGGM
LTVAEEALHALAEQHGKEVSIHLFGQEISDETYAICKADLLLKGEGAEAENIVGGADKST
LSADQFPSRAFDFMISNPPYGKSWKTDLDRMGGKKGFSDRRFIVSHGGDPEFKLLTRSSD
GQLMFQVNKLQKMKHNTPLGSRIALVHNGSALFTGDAGQGESNIRRWVLENDWLEAIIAL
PLNIFYNTGIATYIWVLANKKAQARRGKVQLIDASQWFQPLRRNLGKKNCELGAADIARI
LDLYLGQTQEAAQSKWFDTQDFGYWKVTIERPLRLKSQLSDERIESLRFATGEEALRAEI
YATHGEALYTEFAKCKPAIEAWLKGEDENEDDDSDDSDSGDDNEAPAARKAVPVKRRKKL
LDASTWQRDKALMEVAQRAQQALGRAVFDDHNAFCVGFDAVCKAQDARLSAPEKKAIYKA
VSWRDDAALPVIAKRSKLKAGECFEPGFDGAYLETVGKDRFMVEYEPDSALRDTEQVPLQ
EPGGIDAFFAREVLPHAPDAWIATDKTQIGYEISFARYFYKPVPLRTLADIRADILALEQ
QTEGLLHKIVGNV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagactcaacaagaccaaagccagatcaagtggatttccgacttcatctggaac
atcgctgacaaccgcctgcgcgatgtctatgtgcgcggcaaataccgcgacgtgatcctg
cctttcactgtgctgcgacggctcgacgccgtgctggaagccaccaaggacgcggtgctg
gaacgcaaaaagttcctcgacgcccacaacgtggtcgagcaggatggcgcgctgcgcatg
gcggcgggtcaggcgttctacaacgtctcggaattcaccttggccaagctcaaggccagc
gcggcagggcagcgcctgcgtgatgacttcattgcgtatctggacggcttctcacgcgac
gtgcaggagatcctcaccaagttcaacttccgcaaccagatccagaagctggtggattcc
catgttctcggctacctgatcgaagacttcctcgaccctgaggtcaatcttgcgccgttg
ccggtgaaggatgccgacggtcgcatcaaattgcccgcgctggataaccacggcatgggc
acggtgttcgaggagctgatccgtcgtttcaacgaagacaacaacgaagaggcgggcgag
cacttcaccccgcgcgacgtggtgcagctcatggccaagctgttgtttctgccggtggcc
gagcgcattgagtccagcacttattcgctttacgacggcagttgcggcaccggcggcatg
ctgaccgtggctgaggaagcgctgcacgcgctggccgagcagcacggcaaggaggtctcc
attcacctgtttggccaggagatcagcgacgaaacctacgccatctgcaaggccgatctg
cttttgaagggcgaaggtgcggaagctgagaacatcgtcggcggcgcggataaatccacc
ttgtccgccgaccagttcccttcgcgcgcattcgatttcatgatctccaacccgccctac
ggcaagagttggaaaaccgatctagatcgcatgggcggcaagaaggggttcagtgaccgg
cgctttatcgtcagccacggcggcgatcccgagtttaagctcctcacccgttccagcgac
gggcagctcatgttccaggtgaacaagctgcagaagatgaagcacaacacgccgctgggc
agccgcatcgcgctggtgcataacggctcggcgctgttcaccggcgacgcgggccagggc
gagagcaacatccgccgctgggtgctggagaacgactggctcgaagccatcatcgccctg
ccgctcaacatcttctacaacaccggcattgccacctacatctgggtgctggccaataag
aaggcgcaagcgcgccgtggcaaggtgcagttgattgacgcatcacagtggttccagccg
ctgcgccgcaacctcggcaagaagaactgtgaactgggtgctgccgatattgcccgcatc
ctcgatctctaccttggccagacgcaggaagctgcgcagtccaaatggttcgacacgcaa
gactttggctattggaaggtcaccatcgagcgcccgttacgcctgaaaagccagctctct
gacgaacgcattgagtcactgcgttttgccactggcgaggaggcattgcgtgctgagatc
tacgccacccacggcgaggcgctgtataccgagtttgccaagtgcaaaccggccattgag
gcatggctgaaaggcgaggatgagaacgaggatgacgacagcgacgacagcgacagcggc
gacgacaacgaggcccccgccgcccgcaaagctgtgcccgtcaagcgccgcaaaaagctg
cttgatgcatcgacgtggcagcgcgacaaagcactgatggaggtggcgcaacgggcgcag
caggcattgggccgcgccgtgttcgacgaccacaatgcgttctgcgtcggcttcgatgca
gtgtgcaaggcgcaggacgcacgcttaagcgcgccagagaagaaggccatctacaaggcg
gtgagctggcgcgatgacgccgcactgccggtcatcgccaagcgcagtaagctcaaggca
ggcgaatgcttcgagcccggctttgatggcgcgtatctggaaaccgtgggcaaggatcgc
ttcatggtcgagtacgaaccagacagcgcgctgcgcgataccgagcaggtgccgttgcag
gaaccaggcggcattgatgccttttttgcccgcgaagtgctgccgcacgcgccggatgcc
tggatcgccacggacaagactcagattggctacgagatttcgtttgctcgctatttctac
aagcccgtgccgttgcggacgctggcggacatccgcgcggacatccttgcgctggagcag
cagacggaagggttgttgcataagattgtggggaacgtgtga
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