Xanthomonas hortorum pv. gardneri: BI317_08400
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Entry
BI317_08400 CDS
T04668
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga00300
Lysine biosynthesis
xga01100
Metabolic pathways
xga01120
Microbial metabolism in diverse environments
xga01230
Biosynthesis of amino acids
Module
xga_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BI317_08400
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xga01002
]
BI317_08400
Enzymes [BR:
xga01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
BI317_08400
Peptidases and inhibitors [BR:
xga01002
]
Metallo peptidases
Family M20
BI317_08400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
APP84200
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Position
1821588..1822718
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AA seq
376 aa
AA seq
DB search
MSDIVDLTCELISRPSVTPDDAGCQELIAQRLARAGFAIEHLRLGAVDNLWATHGSGAPV
LVLLGHTDVVPPGPREAWTSDPFDPQIRDGVLYGRGAADMKSGVAAFVVAAEQFVAAHPQ
HTGTLALLLTSDEEGDAINGVRRVAELFRERGQAIDWCITGEPSSTERLGDLLRVGRRGS
LSGTLTVKGVQGHVAYPHKARNPIHLAAPALAELVARRWDEGFESFPPTSLQISNIHAGT
GANNVIPGELQVAFNLRYTPHWDAPRLEAEIAAVLDRHALEYSLRWHRSGEPFYTPEGRL
RSVAREVLGQFAGAPPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVRVADLD
ALPTLYRTLIERLLVE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacattgttgacctcacctgtgaactgatctcccgcccgtcggtgacgccggac
gatgccggctgccaggaactgatcgcgcagcggctggcgcgcgccggctttgctatcgaa
cacctgcggctgggcgcggtggacaatctatgggccacgcacggcagcggtgcgccggtg
ctggtgctgctcggccacaccgatgtggtgccgccggggccgcgcgaggcgtggaccagc
gatccgttcgacccgcagattcgcgatggagtgctgtacgggcgcggcgccgccgacatg
aagagtggagtggccgccttcgtggtcgccgccgaacagttcgttgccgcgcatccgcag
cacaccggcacgctggcgctgctgctgacgtccgacgaagaaggcgatgccatcaatggc
gtgcggcgggtggccgagctgttccgcgaacgtgggcaggcgatcgattggtgcatcacc
ggcgagccgtcgtccacggagcggttgggcgatctgctgcgcgtcggtcgccgcggcagc
ctgtccggcacgctgacggtgaaaggcgtgcagggccatgtggcgtatccgcacaaggcg
cgcaatccgatccatctggcagcgccggcgttggccgaactagtcgcacgacgctgggac
gagggcttcgaaagttttccgccgaccagcctgcagatctccaacatccatgccggcacc
ggcgccaacaacgtgattcccggcgagctgcaggtggccttcaatctgcgctacaccccg
cattgggatgcaccgcgtctggaagcggagatcgccgcagtgctggatcgccacgcgctg
gagtactcgctgcgttggcatcgcagcggcgagccgttctacactcccgaagggcgcctg
cgcagcgtcgcgcgcgaggtattggggcagtttgccggcgcaccgccggaagagagcact
ggcggcggcacctccgatgcgcgcttcatcgcgcctctaggtgcgcaatgcatcgaggtc
ggcccggtcaacgccagcatccaccaggtcgatgagcatgtgcgcgtggccgatctggac
gccttgccgaccctctatcgcacattgatcgagcggctactggtcgaatga
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