Xiphias gladius (swordfish): 120789719
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Entry
120789719 CDS
T07311
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xgl03016
]
120789719 (trdmt1)
Enzymes [BR:
xgl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
120789719 (trdmt1)
Transfer RNA biogenesis [BR:
xgl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120789719 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Stathmin
Motif
Other DBs
NCBI-GeneID:
120789719
NCBI-ProteinID:
XP_039982588
LinkDB
All DBs
Position
LG5:complement(7890065..7907969)
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AA seq
290 aa
AA seq
DB search
MENLRVLELYSGIGGMHYALNESGIPGQVVAAIDINTTANQIYRHNFPDTPLLNKTIEGI
TLDDFNKLSFDVILMSPPCQPFTRIGLKGDIHDPRTKSLLYLLDLLPRLRRLPRFILLEN
VKGFESSSARELLVKTLMECGYTFQEMMVSPTSVGIPNSRLRYFLIAKIATENLSTQTRL
KISDAFPYPAERESSEQPIVLNPTRPCTCQPEEEMQGGHVLYKLETTLDAQRKMNQNNDL
FVRQIQEFLEPQMEVNMEHYLLPPKTLLRYALLLDIVQPTCRRSVCFTKG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcttcgggtgctcgagctttacagtgggataggaggaatgcattatgcttta
aatgagagtggcatacctggccaggtagtggctgctatcgacataaacaccacggccaat
cagatctacaggcacaatttccccgacaccccgctcctgaacaagaccattgagggcata
acactagatgacttcaataaattatcttttgacgtgattttgatgagccctccctgccag
cctttcaccaggataggacttaagggtgacattcatgaccccagaaccaagagcctcctc
tacctccttgatcttctgccaaggctgcgcaggctgccccgcttcatcctgctggaaaat
gtaaaaggctttgagagctcctctgccagggaacttttggtgaaaacactgatggaatgt
ggatatactttccaagagatgatggtctcacccacaagtgttggcatcccaaattcaaga
ctgcgttatttcctgattgctaagattgcaacagaaaacctaagcacccagacacgttta
aagatttcagatgccttcccctatcctgctgagagggaatcctctgagcagcccatagtc
ttgaatcctacccgcccatgtacctgccagccagaagaggaaatgcagggtggtcatgtc
ctgtataaactagagacaacacttgatgcccagagaaagatgaatcagaacaacgatcta
tttgtcaggcagatccaagaattcctggaaccacagatggaagtaaacatggaacactat
ctccttcctcctaaaacactgctgcgatatgctctactcttggacattgttcagcccacg
tgcagaaggtctgtctgttttaccaaagggtag
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