Xiphias gladius (swordfish): 120796777
Help
Entry
120796777 CDS
T07311
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120796777 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120796777 (polr1b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120796777 (polr1b)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120796777 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
120796777
NCBI-ProteinID:
XP_039995778
LinkDB
All DBs
Position
LG11:21264832..21270769
Genome browser
AA seq
1134 aa
AA seq
DB search
MDFSAKWSNVPKGPSLKNLTQGGFGVLKETQHAAVQDLTKAHIESFDQAVTDGLSRVVQA
IPPLEFTIKNDRISLSFVEAAIYNPMVAKGSICREMRVFPAECRGRRCSYKGKLVADVSW
SINGVPKGIIKQSLGQVPIMVKSKLCNLHGMSPKALVEHHEEAEEMGGYFIVNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMHCVKEEHTAINLNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFPDFQIYQELIKGREDNSFYKSCASEMLRMVMEEGCTTRSKV
LDYLGERFRVKMSLPEWYTNEQCANFLLDECICIHLKSDVEKFYLLCLMTRKLFTFAKQE
CMEENPDSIMCQEVLTPGQLYLMFLKERMAAWLVSVKLSFDKRGSRLSGGWSAENMMKIF
NMGSDLTKPFEYLLATGNLNSRTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAPTLPTTSLPALLCSLGVT
PVDGSPGQAFADCYPVVLDGAVVGWLETELAPVVVDSLRRFKVLREKKIPPWTEIVLVPK
TGKASLYPGLFLFTTPCRMVRPVCNLALGKEELIGTFEQLYINVGILEDEIKPGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFMDRSDNKLYRLQTPQSP
LVRPYMYDHYNLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVRGEDSVVFGTKPGDPILNEKLDADGLPHIGSTLQYGDPFYSYINLNTGQTFTNYY
KSQEACVVDNIKICSNDTGSGHFKRICITIRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSGALHGLSHDATPFTFSEENSALEY
FGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TMQPVGGRNIQGGIRFGEMERDALLAHGSSFLLHDRLFNCSDRSVAQVCVDCGSLLSPLL
EKPPPYWSSMRHRKTVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcagcgaagtggagtaatgtacccaaaggtccgagtctaaagaatctgaca
cagggaggatttggcgtcctgaaagagactcaacatgctgctgtccaggatttgacaaaa
gctcacatcgagtcgtttgaccaggctgtcactgacggactcagccgcgttgtgcaggcc
atcccccccttggagttcacaataaaaaacgacaggatcagcctttcattcgtcgaagcc
gctatctacaacccaatggtcgccaaagggagcatctgcagggaaatgagagtgtttcca
gcagagtgcaggggaagaagatgctcatataaaggaaagctggtggcagacgtcagctgg
tcgatcaatggcgttccaaaaggcatcatcaaacagtccctgggtcaggtgcccatcatg
gtgaagtccaagctgtgcaatctccatggtatgtcccctaaggcgctcgtcgaacaccat
gaagaagcagaggaaatgggaggttatttcattgtgaatggaattgagaaggttatccga
atgctgatcatgccgaggaggaactatcctattgccatgtcaagacctaagtggaagagt
agaggccagggatacactcagtatggcatttctatgcattgtgtgaaggaagagcacaca
gcaatcaacctgaacctacattatctggaaaatgggactgtcatgctgaacttcatctat
cagaaagagctcttcttcctccctctaggcttcgcactcaaggccttggtggacttccca
gacttccagatctaccaagaactgatcaagggccgcgaggacaattccttctacaagagc
tgtgcgtcagagatgctgcgcatggtcatggaggagggctgcaccacccgcagcaaggtg
ctcgattaccttggtgagcgctttcgggttaaaatgagccttcctgagtggtacacaaac
gagcagtgtgccaacttcctgctagatgagtgcatctgtatccacctgaagtcggacgtg
gagaagttctacctgctgtgtctgatgacaaggaagcttttcacgtttgccaagcaggag
tgcatggaggagaaccccgacagcattatgtgtcaggaagtgctcactcctggtcagctc
tacctcatgtttctgaaggagagaatggctgcctggttggtgtctgtgaagctgtccttt
gacaagagaggcagcagactgagtggaggatggagcgctgaaaacatgatgaagatattc
aacatgggctctgatttgaccaaaccctttgaatatttgctggccactgggaacctcaac
tccaggacaggtcttggcatgctgcagaacacaggcctttgtgtcgtagctgacaagctc
aacttcatccgctacctgtcccacttccgctgtgtgcacagaggagcggcgttcgccaag
atgaggaccacttctgttcgtaagctgctgccagagtcctggggcttcttgtgtcccgtc
cacactccggacggagagccttgtggcctaatgaaccacatgacggccagctgtgagatt
gtggcaccgaccttgcccacaacatccctgcctgctctgctctgttcccttggtgttact
ccagtggatgggtcccctggtcaagcctttgcagactgctaccctgtggtccttgatgga
gctgtggtaggctggttggagacggaattagccccagttgtggttgactcactgcgcaga
ttcaaggtgctgagagagaagaagatccctccctggactgagattgttctggttcccaaa
acaggcaaagccagcctgtacccaggcctgttcctcttcacaacaccctgtcgtatggtg
cggcctgtatgcaatctagctcttggaaaggaagagttaattggtacctttgaacaactt
tacatcaatgtgggcatcttggaggatgagatcaagccaggagtgaccacacaccaggaa
cttttccctcacagtatgctgagcgtggtggctaacttcatcccttactcagaccacaac
cagagtcctaggaatatgtaccagtgtcagatgggtaagcagactatgggtttccccctg
cactcattcatggatcgctcagataacaagctgtaccggctccagaccccacagagccca
ctggtcaggccctacatgtatgaccactacaacctggacaactaccccagtggcacaaac
gccattgtggctgtcatttcctacacaggctacgacatggaagatgcaatgattgtgaac
aagtcatcgtgggagagaggctttgcccatggaagtatatacaagactgagctggtggat
ctggcagacaaggtgaggggagaggacagcgtggtgtttgggaccaagccaggtgatcct
atattgaatgaaaaactggatgctgatggactacctcacattggatcaacacttcagtat
ggagaccctttctacagctacatcaacctcaacacaggccagaccttcaccaactactac
aagagccaagaggcctgtgtagttgacaatataaagatctgcagcaacgacactggctca
ggccattttaaacgcatctgcatcaccatacgagtgccacgaaaccccaccatcggagac
aagtttgccagtcgccatggtcagaagggcatcctgagccgcctgtggccggccgaggac
atgcccttcacagagagtggcatgacccccgacatcctgttcaacccccacggcttcccc
tcccgcatgaccatcgggatgctgattgagagcatggccggcaagtctggcgccctgcac
ggcctgagccacgacgccacacccttcaccttttctgaggagaactctgcgctggagtac
tttggtgaaatgctccgggctggtggctacaactactatggcacggaacggctctacagt
ggactgagcggtcaggagctagaagccgacatcttcattggagtcgtctactaccagcgg
cttcgtcacatggtctctgacaaatttcaggtgaggaccacaggagcgcgagacaaggtg
accatgcagccagtgggagggaggaacatccagggaggcatccgttttggagagatggag
cgagacgccctgctggcgcacggctcctccttcctgctccatgatcgcctcttcaactgc
tcggaccgatcagtagctcaggtgtgtgttgactgtggtagtctcctctcccctctgtta
gagaaaccaccaccctactggtcgtccatgcgccaccgtaagactgtgtgcaccctgtgc
ggcaaaagtgactctattgactcagtgtctgttccttatgtcttccgctactttgtagcc
gagctcgcagcaatgaacattaaagttaaattagacgttaagtga
DBGET
integrated database retrieval system
