Xiphias gladius (swordfish): 120803545
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Entry
120803545 CDS
T07311
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03266
Virion - Herpesvirus
xgl04145
Phagosome
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
xgl04810
Regulation of actin cytoskeleton
xgl04820
Cytoskeleton in muscle cells
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120803545 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120803545 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120803545 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
120803545 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120803545 (itga5)
04810 Regulation of actin cytoskeleton
120803545 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120803545 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120803545 (itga5)
04515 Cell adhesion molecules [BR:
xgl04515
]
120803545 (itga5)
04090 CD molecules [BR:
xgl04090
]
120803545 (itga5)
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120803545 (itga5)
Cell adhesion molecules [BR:
xgl04515
]
Integrins
Integrin alpha subunits
120803545 (itga5)
CD molecules [BR:
xgl04090
]
Proteins
120803545 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
DUF11
Motif
Other DBs
NCBI-GeneID:
120803545
NCBI-ProteinID:
XP_040008021
LinkDB
All DBs
Position
LG18:24189557..24222365
Genome browser
AA seq
1059 aa
AA seq
DB search
MGLERFCVKTPRMVAPLARSLLCVIGLLLSFSQPVCEAFNLDAENPAVYSGPDGSYFGYA
VDFYLADSASASVVIGAPKANTRQVNVTEGGSVFYCPWSLSQSDCHTIEFDTEGDRTVSI
NDTEHQGDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDIPRSDATGTCYLSVHNFTKF
VEYAPCRTEISDAEGQGYCQGGFSADFTRDGKVVLGGPGSYFWQGQVISAAKEDIIKAYY
PGYFVQSVEGQIQTKQVQAKHDDSYQGYSVAVGEFSGDQVEDFVAGVPKGLMLYGSVSVL
NGTDLKTMINYTGEQMGSYFGYAVATTDINSDGMADLLVGAPMFMVRGSDSRLEEMGRVY
VYLQRGPLNLELSVPHLTGTQAFGRFGSTIAPLGDLNLDGFNDVAISCPFGGEDWQGLVY
IYNGYSEGLREKPSQVITGQWAAGTVPASFGFALRGAKDLDMNGYPDLIVGAFGVNKAVL
YRSRPIVNTSASLTVYPTMINPEEKNCMVTSGNASIPVSCVNLNFCISAEGKHLPDILDF
HVEVQLDSHKHKQKGAVKRALFLDSQQPLLQRSVRVRHGERVCNHTKIYLRDEKEFRDKL
SSIYVAVNFSLDPKAAADSHGLRPILNYQTTSVIEQKAQILLDCGEDNICVPDLKLAVHG
DRKEVYLGDDNSLTLTFNAKNEGEGGAYEAELYVVLPPEADYSGIARNNETLAQLTCSYE
TENQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDTHKTVQFELQIRSKNENNSHSEVVP
YKLEVVVQADVILQGVSRPDKVFFPPGNWKATKSYGELDDVGPRVEHIYELVNNGPSRIS
HTLLELRCPLSVQGHNLLYPVDFSTEGPINCTSDKTMNHLHLKIPHTSTEPPILALRAHE
HRVERRDVHRNQLAHLTNLSCSNVECWSLQCKVGLLEKGTTAILKVRSRLWAETFIERAY
KQYVLECLARYSVKEMPYAILPKHAPSGHKKVVTPVVWNKPDIENSVPLWIIILAILAGL
LLLALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggggctggagcgtttctgcgtaaagacgccgaggatggtggccccgctcgcccgctca
ctcctttgtgtcatcgggctgttactctctttttctcagcctgtgtgcgaggcgttcaac
ttggacgcggagaatccagctgtttacagcggacctgacgggagctacttcggatatgct
gttgacttttatttggctgattctgccagtgcaagtgtggtgataggagctcccaaagcc
aacacaaggcaggtcaatgttacagagggaggttctgtattctactgtccatggagcctc
agccaatcggattgtcacaccatcgagtttgatactgaaggagatcgcaccgtttcaatc
aatgacacagaacaccagggcgatttcaagtcccaccaatggttcggcgccaccgtgcgc
tcccacggtgacacaattctggcttgcgcccctctctactcttggcggactgaaaaagac
atcccccgatcagacgctacaggaacctgctacctctccgtccacaatttcaccaaattt
gtggagtacgctccctgccgcacagagatcagtgatgcggagggacaaggatactgtcag
ggaggattcagcgctgatttcacaagggatggcaaagtggtattgggagggccaggcagc
tacttttggcaaggtcaggtgatctccgcagctaaggaggacattatcaaagcatactac
ccaggctattttgtgcagtctgtggagggccagatccagaccaagcaggtccaggctaaa
catgatgacagctaccaaggctactctgttgctgttggggaattcagtggtgatcaggta
gaagattttgtggctggtgttccaaaggggctcatgctttatggttcggtgtctgttctg
aatggtacagatctgaagaccatgattaactacactggcgagcagatgggatcatatttt
ggctatgcggtggcgacgactgacatcaacagtgatgggatggctgacctgctggttggt
gctcccatgttcatggtccggggctctgatagccgcctggaagagatgggccgggtctat
gtttacctacagcgtggccccctgaacctggagctaagcgtacctcacctcacaggcacc
caggcattcgggagatttggcagcaccattgcaccattgggagatctgaacctggatggt
ttcaatgacgtggctattagctgtccatttggaggggaggattggcagggactggtctac
atctataatggatactcagaaggactcagggaaaagccatctcaggtgatcactggccag
tgggccgctgggactgttcctgccagttttggatttgccctcagaggtgctaaggacctg
gacatgaacggatacccagatctcattgtcggtgcttttggtgttaataaagcagttctc
tatagatcgcgcccaatagttaacaccagtgcctctctgacggtttaccccaccatgatc
aaccctgaagagaagaactgcatggtcaccagtggaaacgccagcatccctgtttcctgt
gtcaacctgaatttctgcatatctgctgaagggaagcacctaccagacatcctagatttc
catgtggaggttcagcttgatagtcataagcacaagcagaaaggtgcagtgaagagggct
ctgttcttggattcccagcagcccttgctccagaggagtgtgagggttcgccatggcgag
cgcgtgtgcaaccacacaaagatctacctgagggatgagaaggaattcagggataaactc
tcctccatttatgtggccgtgaacttcagcttggatccaaaggctgcagctgactcccac
ggcctgcggcccatcctcaactatcagaccaccagtgtgattgagcagaaggctcagatt
ctgttggactgcggagaggacaatatctgtgttcctgatttgaagctggcagtccatggg
gacaggaaggaagtctacctgggtgacgacaactcgctgaccttgacttttaacgccaaa
aatgagggtgagggaggggcgtacgaagcagagctgtatgtggtgctcccccctgaagct
gactacagcggtattgcccgcaataatgagaccctggcccagctgacctgcagctatgag
acggagaaccagactcgatacctcagctgtgatttgggcaacccgatgaagtctggtacc
agtctgtgggcaggtttgcgcttcacagtgccacggttgaaggacacgcacaaaactgtc
cagtttgagctgcagattcgcagtaaaaatgagaataattcccacagtgaggttgtgccc
tacaagctggaggtggttgttcaggctgatgtcattctacaaggcgtgtcccggccagat
aaggtcttcttcccgccgggcaactggaaggcgaccaaaagctatggggagttggatgac
gttgggcccagagtggaacatatctatgagttggtgaacaacgggcctagtcggatcagc
cacaccctgcttgagctacgctgccccctcagcgtccagggtcacaatctcctttaccct
gtggacttctccacagaaggccccatcaactgcacctccgacaaaaccatgaaccaccta
caccttaaaatcccgcacacatccacggaaccacctattctggcactgagggcccatgag
caccgggtggagaggagggacgtccacaggaatcaactggctcatttgactaacctgtcc
tgctctaatgtggagtgctggtcgcttcagtgcaaagtgggtcttctggagaaggggact
actgccatcctcaaagtgcgctcccgcctctgggccgagaccttcattgagagggcctat
aagcaatacgtgctggagtgcctggcaagatacagtgtgaaggagatgccttacgccatc
ctacccaaacatgcacccagtggacacaaaaaggtggtgacgccagtggtgtggaacaag
ccagatatcgagaactcagttcctttgtggatcatcatcttggccattctggctggttta
ctgcttctggctttactcatctatgttctatacaagtttggcttctttaagcgatctcta
ccttatggcaccgcgatggagaaggcacagctaaagccacaggctgcctctgaggcctag
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integrated database retrieval system
