KEGG   Xiphias gladius (swordfish): 120804721
Entry
120804721         CDS       T07311                                 
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03022  Basal transcription factors
xgl03420  Nucleotide excision repair
xgl04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120804721 (cdk7)
  09124 Replication and repair
   03420 Nucleotide excision repair
    120804721 (cdk7)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120804721 (cdk7)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:xgl01001]
    120804721 (cdk7)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xgl03021]
    120804721 (cdk7)
   03019 Messenger RNA biogenesis [BR:xgl03019]
    120804721 (cdk7)
   03400 DNA repair and recombination proteins [BR:xgl03400]
    120804721 (cdk7)
Enzymes [BR:xgl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     120804721 (cdk7)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     120804721 (cdk7)
Protein kinases [BR:xgl01001]
 Serine/threonine kinases: CMGC group
  CDK family
   120804721 (cdk7)
Transcription machinery [BR:xgl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     120804721 (cdk7)
Messenger RNA biogenesis [BR:xgl03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     120804721 (cdk7)
DNA repair and recombination proteins [BR:xgl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     120804721 (cdk7)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Seadorna_VP7 ABC1 Kinase-like APH
Other DBs
NCBI-GeneID: 120804721
NCBI-ProteinID: XP_040010205
LinkDB
Position
LG19:16543188..16549059
AA seq 343 aa
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTTDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPANIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGNGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGV
CSLPDYVSFKVLPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRTTATQALKMRYFSNRPS
PTPGPQLPQPNCSAEALREKETVGLKRKIEGLETTVMKKKLIF
NT seq 1032 nt   +upstreamnt  +downstreamnt
atggcgcttgatgtaaaatccagagccaaaagatacgagaagctggatttcctcggagag
ggtcagtttgccacagtgtacaaggccagggacaaaacaactgacaccatagttgccatt
aaaaagattaaggttggtcacagaaccgaggctaaagatggtataaataggactgctctg
cgagagatcaaactactgcaggagctgcatcatccaaatatcattgggctgctggatgcc
tttgggcacaaatctaacatcagtctggtgtttgacttcatggaaacagatctagaggtg
atcatcaaagacaccagcctagtcctgactccagccaacatcaaagcctacatcctcatg
actctacagggattagagtatatgcaccagcactgggtcttacacagggatctgaagccc
aataatctgctgttggacggcaacggcgtgttgaagttggctgattttggtttggccaaa
tcatttggcagccccaacagagtctacacgcatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgttgacatgtgggcagtggga
tgcatcctggcagagttactccttcggataccattccttgctggagactcagatcttgac
cagctaactaagatctttgaggctcttgggacgcccacagaagagacatggcctggagtg
tgtagcctgccagactacgtgtccttcaaagtccttcctggtacacctctggaacatata
tttagtgcagccggagacgacttactagagctcctacagggcctctttacctttaaccca
tcgacaaggaccacagctacacaggctctgaagatgagatacttcagtaatcggcctagt
ccaactcctggcccccagctcccccaacccaactgttcagctgaggctctgagggagaag
gaaacagtcgggctcaagaggaaaatagagggcctggagacaactgtgatgaagaagaag
ctaattttctga

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