Xanthomonas hydrangeae: LMG31886_16050
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Entry
LMG31886_16050 CDS
T07925
Symbol
rimO_2
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xhd
Xanthomonas hydrangeae
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhd03009
]
LMG31886_16050 (rimO_2)
Enzymes [BR:
xhd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LMG31886_16050 (rimO_2)
Ribosome biogenesis [BR:
xhd03009
]
Prokaryotic type
ribosomal protein modification factors
LMG31886_16050 (rimO_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
CAD7731742
LinkDB
All DBs
Position
LMG31886:1940281..1941180
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AA seq
299 aa
AA seq
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MRGDLASRPVDEVLREAERLVRGGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKA
LCEGLSELGVWTRLHYVYPYPHVDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAV
EKTLERVQRWKAMCPEITVRSTFIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVEG
ASANALPDPVPEELKQERLARFMAKQAEISAARLEAKIGSVQQCLVDLIEDDIAVARSRA
DAPEIDGLVHIQNGGELGLKIGDLVDVEITDSDEHDLFGDALPANAPIQQGRALNLQMV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgatctggcctcgcgcccggtggatgaagtactgcgcgaagccgaacggctg
gtgcgcggcggggtcaaggaattgctggtggtctcgcaggacacctcggcttacggcgtg
gatctgaaatacgccgagcgcccgtggcgcgaccgcatgtaccaaacccgcatgaaggcg
ctgtgcgaaggtttgtcggagctgggcgtgtggacgcgcctgcattacgtgtatccgtac
ccgcacgtggacgatgtgattccgctgatggccgaaggcaagctgctgccgtacctggac
atcccgtttcagcacgccagcccgcgcatcctcaagctgatgaagcgtccgggcgcggtg
gagaagacgctggagcgcgtgcagcgctggaaggcgatgtgcccggagatcacggtgcgc
tccaccttcatcgtcggtttccccggcgagaccgatgccgaattcgaatccctgctcgac
ttcctggatcaggcccagctcgatcgcgtcggtgcgttcgcgtattcgccggtggaaggc
gccagcgccaacgcattgccggacccagtgccggaagagctcaagcaggagcggctggcg
cgtttcatggccaagcaggcggagatttccgccgcgcggctggaagccaagatcggcagc
gtgcagcaatgcctggtcgacctgatcgaagacgatatcgcggtggcccgttcgcgcgcg
gacgcaccggaaatcgacgggctggtgcatatccagaacggcggcgagcttggattgaag
atcggcgatctggtcgatgtggagatcactgacagcgatgagcacgatctgttcggcgat
gcattgccggccaatgccccgatccagcaaggacgcgcgttgaatctgcagatggtgtaa
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