KEGG   Xanthomonas hydrangeae: LMG31886_36000
Entry
LMG31886_36000    CDS       T07925                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xhd  Xanthomonas hydrangeae
Pathway
xhd00740  Riboflavin metabolism
xhd01100  Metabolic pathways
xhd01110  Biosynthesis of secondary metabolites
xhd01240  Biosynthesis of cofactors
xhd02024  Quorum sensing
Module
xhd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xhd00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LMG31886_36000 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LMG31886_36000 (ribD)
Enzymes [BR:xhd01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LMG31886_36000 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LMG31886_36000 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: CAD7743740
LinkDB
Position
LMG31886:complement(4222037..4223131)
AA seq 364 aa
MSATADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGAHAEVFAL
RAAGALARGATAYVTLEPCAHYGRTPPCALALIAAGVTRVVAAMADPFPQVNGGGFALLR
EAGIEVLSGVMQAQARVLNQGFLSRVERGRPWLRIKLGASLDGRTALASGESKWITGADA
RADVQRWRARAGAILTGAGTVLADDPSMTVRLGDDTPFVPPLRVVLDAGLRTLACENIRQ
GNAPTLYVHGDDVLPPSLDDAQFVAMPLHAGRFDLSVVLASLAERGINEVHVEAGATLSG
ALLHAGLVDELLVYMAPVLLGDTARPLLAGLGIETMAQRHSLQLLDVRQLGQDLRLRYVP
LTAE
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgagcgcaacggccgacgaccaccgctggatggcgcaggcactgcgtttggccgagcgt
ggtgcgtacaccacgcgccccaacccgatggtgggctgtgtgatcgtgcgcgatggcgta
tgcgtgggcgaaggcttccatcaacgtgccggtggcgcgcacgcggaagtgttcgcgttg
cgcgcagccggggcgctggcgcgcggcgccaccgcctatgtgaccttggagccgtgcgcg
cattacgggcgcacgccgccgtgtgcattggccttgatcgccgcaggggtgacgcgtgtg
gtcgcggcgatggccgacccgtttccgcaggtcaacggcggcggtttcgcgttgctgcgc
gaggccgggatcgaggtgcttagcggtgtcatgcaagcacaggcgcgcgtgctcaatcag
gggtttttgtcgcgggtggaacgtggccggccgtggctgcggatcaaactcggcgcgagt
ctggatggtcgcactgcgctggccagcggcgagtccaaatggatcaccggcgcggatgcg
cgtgccgatgtgcagcgctggcgtgcacgtgccggcgcgattctcactggcgcaggcacg
gtgctggcggacgatccatccatgaccgtgcggctgggcgacgacacgcctttcgtgccg
ccgctacgcgtggtgctcgatgccggtttgcgcacgttggcgtgcgagaacattcgtcag
ggcaatgcgccgacgctctatgtgcatggcgatgatgtgctgccgccgtcgctcgacgat
gcacagttcgttgcgatgccgctgcacgccggccgcttcgatctgtctgtcgttttggcg
tcgctcgccgaacgcgggatcaacgaggtgcatgtggaagccggcgcgacgctgagcggt
gcattgctgcacgccggcctggtcgacgaactgctggtctacatggcgccggttttacta
ggcgataccgccagaccgctgctcgccggactcggcatcgaaacgatggcgcagcgtcat
tccttgcaactgctagacgtgcgccagctcggtcaggatctacgattgcgttacgtgccg
cttaccgccgagtga

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