Xiphophorus hellerii (green swordtail): 116707707
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Entry
116707707 CDS
T07363
Symbol
slc6a4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116707707 (slc6a4)
Transporters [BR:
xhe02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116707707 (slc6a4)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116707707
NCBI-ProteinID:
XP_032401068
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Position
18:complement(14020912..14036975)
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AA seq
673 aa
AA seq
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METKDMMMTSMSTMDKEENGGELDKGREEIEGQEEETQQENGRLVLADGLGDRGPKSLTS
GSGQQVSNGYTTSTPQSPREGSAPGSAAGAAPGPTGGTGLTGPLGGLRTLVVQQTSLERP
RETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYMELA
LGQFHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLPWT
TCTNSWNTANCNHYLSSDHNVSWSNSSTSPAEEFYTRHVLQVHLSPGLHQLGSISWQLAL
CLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLVLLIRGATLPGAWRGVVFYLKPDW
EKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALVTSSVNCLTSFLSGF
VIFTVLGYMAEMRKQNVDDVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLD
STFAGLEGVITAMLDEFPHFLAKRREWFVLGLVCVCYLGALSTLTYGGAFVVKLFEEYAT
GPAVITVVLLEVIAVSWFYGTNRFCNDIQVMLGFYPGGFWRVCWVAICPCFLLFIIISFL
AFPPEVKLFHYQYPSWTTVLGYCIGVSSFICVPAYMVYHLLNSKGTFKQRLLKSITPQPS
TDNHRDLFVTNAI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaggatatgatgatgactagcatgtcaacaatggacaaagaggagaacggg
ggagagctggacaaagggagagaggaaatagaggggcaagaggaggagacacaacaggaa
aatggtagattggttctggctgatggtctcggagatagaggaccaaagagcttgacctct
ggttccggtcagcaggtgtccaatggctacacaacctccacccctcagagccccagagag
ggatcggcaccgggatcggctgcaggggcagcgcccgggcccacagggggaactgggtta
acggggccgctaggaggtctgagaactctggtggtccagcagaccagcttagagaggccc
agagagacctggagcaagaagatggactttctgttgtctgtgatcggctatgctgtggat
ctcggaaacgtctggcgattcccatacatctgctaccagaatggaggaggtgcctttttg
ctgccctacctgttgatggctgtgtttggaggagtacctctcttctacatggagctagcg
ctaggccagttccaccgcagcggctgcatctccatctggaaacacatctgccccatcttt
aaaggaattggctttgccatctgcatcatagccctttacatcgccttctactacaatacc
atcatggcctgggccctctactacctactgtcatcttttcgacccaccctgccttggacc
acctgcaccaacagctggaacacggccaactgcaaccactacttgtcctcggaccacaat
gtgtcctggtccaactcgtccacgtcccccgccgaggagttctatacgcgccacgtgctc
caggtccacctgtccccaggtctgcaccagctgggatccatcagctggcagctggccctc
tgcttgctcttcatcttcaccatcgtctacttcagcatctggaagggagtcaagacgtct
ggaaaggtagtatgggtgactgcaacatttccctatctggttctcctggtccttctcatc
cgaggggccacgctgccaggggcgtggaggggcgtcgtcttctatctcaaacccgattgg
gagaagctgcttagcacgacggtatggatcgatgcggcagctcagatcttcttctccttg
ggtcctggctttggtgtgctgctcgccttcgccagctacaacccttttcacaacaactgc
tacaaagatgcactggtcacgagctcggtgaactgcctcaccagcttcctgtctggtttt
gtcatcttcactgttctggggtacatggcagagatgagaaagcaaaatgtggacgatgtg
gcgaaggacgcaggccccagcttgttgttcatcatttatgctgaagccatagccaacatg
cctgctgccacgttctttgccatcatcttcttcctcatgatcataatgttgggtctggac
agcacgtttgcaggtttggagggcgtaattaccgccatgctggatgagttccctcatttc
ctagctaagagacgggagtggtttgtccttggccttgtctgtgtgtgctacctgggggct
ctgtccactctcacatatggaggagcatttgtggtgaagctgtttgaggagtacgctaca
ggtcctgccgtcatcactgtagttctgctcgaagtcatcgctgtgtcctggttctacggt
accaaccgtttctgcaacgacatccaggtcatgctcggcttctatcccggtgggttctgg
agggtttgctgggtggccatctgtccctgcttccttctgttcatcatcatcagtttcctg
gcgttccctccagaggtcaagctgttccactaccaatacccatcatggacaactgtcttg
ggctactgcattggagtgtcctcattcatttgtgtgcctgcttatatggtctaccactta
cttaactctaagggaacattcaaacagcgcctgttgaaaagcatcactcctcagcccagc
accgacaaccacagagatttatttgtgaccaacgcaatctga
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