Xiphophorus hellerii (green swordtail): 116707862
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Entry
116707862 CDS
T07363
Symbol
rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8 isoform X1
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116707862 (rrp8)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
116707862 (rrp8)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116707862 (rrp8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
116707862
NCBI-ProteinID:
XP_032401416
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All DBs
Position
18:complement(30324400..30330611)
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AA seq
540 aa
AA seq
DB search
MFNEDEDWSDEQEGRILSKAVFKKSQKANNSIQLKSNVGKKSLLRTLETLGSTPDWRSSD
HEQDSGSETEVPSSPSKRKKRKKRRKHGEQSEETQEGGDDRQTVKEKQLKKKKRENKPVA
SKAQRMPSAETEVEKVPEPSQESVNKQQDPERLSRQQWRNKMKNKKRSKNKFRQNKPEDD
ADGARTADKREAAEDVKKDPHNGNGENISQTANRKQKKEKVKRKNTEREADGCSAARGEN
QLEAERLKSGSEFSAEGLKHGAGVQVASTDRQKPELSKERSLKRQKLQKILLRQERVGEG
PVERTEMEAAVPEAAAEQSRSDSLRSRMEQRLEAARFRYINERLYSTASGEARRMFQQDP
EAFWVYHRGYTAQVQRWPANPLDAIIAYIHKRSPSLVVADFGCGDCKIARSVKNKVHSFD
LAAACDLVTVCDMAKVPLGDDSVDIAVFCLSLMGTNLVEFLAEANRVLKMRGVLKVAEVA
SRFDNVQNFISALAGLGFKMTSKDTENSHFFSFEFVKTGNVPQNVKKFGLQLRPCLYKKR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaggatgaggactggagcgacgagcaagagggacgaatcctgagcaaagct
gtctttaaaaagtctcaaaaggcgaacaacagtatacagctaaagtccaatgttgggaag
aagagcctgctgcggaccctggagactctggggtcgacaccagactggaggagcagcgac
catgagcaggacagcggcagtgagacggaagtcccttcatcacccagtaaaaggaagaag
aggaagaaaaggaggaaacatggagagcagtcagaggagacgcaggaaggtggagacgac
cgtcaaactgtcaaagagaaacaactgaagaagaagaagagggaaaacaaacctgtagcc
tcaaaagcacagaggatgccttcagcggagacagaagttgaaaaagttccagaaccttct
caagagagtgtaaacaaacagcaagacccagagaggctgagcaggcagcagtggagaaac
aagatgaagaataagaagagatccaagaacaagttccgccagaacaaacctgaggacgat
gcagacggagctcgaaccgccgataaacgggaagcagcagaagacgtcaaaaaagatcca
cacaacggcaacggggaaaacatcagccagacggcaaaccggaaacaaaagaaggagaaa
gtgaaaaggaagaacacggagagagaggcagatggatgcagcgcggcaagaggggaaaac
cagctggaggcggagaggttaaaaagtggatctgaattctctgctgagggattaaaacac
ggagcaggtgttcaggtggcgagcaccgaccgacagaaacctgagctgagcaaggagcgg
agtctgaaaagacagaagctgcagaagatcctcctccgccaggaaagggtcggcgagggt
ccagtggagaggacggagatggaggcggcggtcccggaggcggcggcggagcagagccgc
tccgactccctcaggtcccgcatggagcagcgcctggaggcggcgcgcttccgctacatc
aacgagcgtctgtacagcacggcgagcggcgaggccaggcgcatgttccagcaggaccca
gaggcattctgggtgtaccacagaggatacacggcacaggtccagaggtggcccgccaac
ccgctggacgccatcatcgcttacatccacaagaggtcaccttccctggtagtggcagac
ttcggatgcggtgactgtaagatcgcgcgcagcgtgaagaacaaagtgcacagcttcgac
ctggctgccgcctgtgacctcgtcaccgtctgtgacatggccaaagtgcctctcggtgac
gactctgtggacatcgccgtgttctgtctgtccctcatggggaccaacctggtcgaattc
ctggcagaagccaaccgcgtcttgaaaatgaggggcgtcctgaaagttgcagaagtagcg
agccgatttgacaacgtgcagaacttcatctctgcactagcaggcctgggttttaagatg
acatccaaggacacagaaaacagtcatttcttctccttcgagtttgtgaagacaggaaat
gttccccaaaacgtgaagaagttcggactgcagttaaggccttgtctatacaagaaaaga
tga
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