Xiphophorus hellerii (green swordtail): 116708498
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Entry
116708498 CDS
T07363
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116708498
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116708498
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116708498
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Glutamate (ionotropic)
116708498
BRITE hierarchy
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
MS_N
Motif
Other DBs
NCBI-GeneID:
116708498
NCBI-ProteinID:
XP_032402254
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Position
19:19662186..19783329
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AA seq
1337 aa
AA seq
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MVSLSGLWSRCLAPGRTRLLFISVRVLPLLLLLLLTPFSSAETCFPHPAPCHILARIGHT
VRLGALLPTRQPARIQNALNRALASIRHQSSGTDSTTASAQPAPLLPYNLTLEMVVRSPA
GWDPESLSHSACQDLVIRGVTAVLAFPRSREELIQVEFLSSFLEIPFVSILEDTEPLVTK
NRFHLQMSARVPPSTLGSLLLAVLQSGDGDRDRGSRGEGRWGGAAVICPGWDEGSDGLLT
HLQKHSGPAWHLWDIINLTLITGSKERRGETSEERREDQMEEEALNIISSSFLRSPSPIS
SVLLMGSDPECLSSVLRAAQRLAPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRK
PISFYIRDALQLVGRAVTTATMVKPELALVQNLVNCYDTPNRHELPSSGQYLSRFLSNIS
FTGSTGLIQVDAGVSRVLSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVG
GLGNSQGQGLGAGVRGGDGQGDGYFGGRWRPGLSVEEHRLRVVTLVEHPFVFTREVDEDG
LCPAGQLCLDPKTNRTDVINGLFNQLHNPNSTVIDWEGIDLPGDLRKCCYGYCIDLLEKL
AEDMGFTFDLYIVGDGKYGALSGTGRWTGLVGDLLNGTADMAVTSFSINSARSRVIDFTS
PFYSTSLGILVRSRDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPH
GRNRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAA
VMVGEKTFEQVSGIHDEKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHDYMRRYNQPTTP
EGVHMLKTDPPALDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRN
VSEFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGAL
LTLAGEHTFYHLVVPRLRRSNTLQYWLHTSQKIHRALNTTYEDVGKELTGLDQKPSSCIS
ENCTLHRKQHQPSPPSPPTSLPASTTAGETGSSSPSHEPKEKRVHFDLDTLHSYRLRTHT
ASVRGRPGMVGRPGLGLGGFGFGSLGSFTSPPQINLHVNGGPVSTLASTGLVLSPLGNRA
TQTSLWEGELQELQVKIETFRNQLREALARRAEIQTSLDRERSGLVRRDTSLDRERDRQK
VQTINTDRSSSTLSKLPERDRTSQLQTLNNQQTGRPSQTAGAGTAGLGWTSQLNTVNSLD
RGRATQSCPVVTMTGERTVQSRPSSLERSQVNQQGAGNITVQTRNTSSLDRQKANLSRTL
NTLERTKASQSSVSSGT
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctctttctggactctggagccgctgcctcgccccggggagaacccgtctcctt
ttcatctctgtcagagtgcttccgctactgcttctcctcctgctgactcccttctcctct
gccgagacctgcttccctcacccggcgccctgccacatcttggcacggatcggacacacc
gtgcgcctcggtgcgctcctgccgacccgccagccggcgcggatacagaacgcgctcaac
cgcgccctggcgagcatccggcaccagagcagcgggacggactccaccaccgcttccgcc
cagccggcccctctgctgccctacaacctgaccctggagatggtggtgcggtcgccggcg
gggtgggacccggagtcgttgtcccacagcgcctgtcaggacctggtgatcagaggcgtg
acagccgtgctcgcctttccacgctccagggaggagctgatccaggtggagttcctctcc
tctttcttggagattcccttcgtgtccatcctggaggacacggaaccccttgtcactaag
aaccggtttcacctccaaatgtcggcccgcgtgcctccatcaacccttggcagcttgctg
ctggcggtcctgcagagtggcgacggggacagggacagagggagccgaggagaaggcaga
tggggaggtgcagctgtgatctgccccggatgggatgaaggcagcgacggcttgctgact
cacctgcagaagcacagcggtcctgcttggcatttgtgggatattatcaacctgacgctc
atcaccggcagcaaagagagaaggggggagaccagcgaggagaggagggaggatcaaatg
gaagaagaggctttgaacatcatctcttccagtttcctgcgctccccctcgccgatctcc
tccgtgctactcatgggatctgacccggagtgtctctcatctgtcctgcgagccgctcag
cgccttgccccgtcacttccagcgctgcagtggatcatgggatatcctttgtcccctgat
tcactgcacactctgggaggtccccttggactgctggcctatggggaggtgggacgcaag
ccgataagcttctacatacgggatgccttgcagctggttggtcgagcggtcactacggcc
accatggtgaagccggagttagcgctggttcagaacttggtaaactgttacgacacacca
aacaggcatgaactaccgtcttctggacagtatctttccaggtttctgtccaacatctct
ttcactggctctacgggactgatccaagtggatgctggtgtttctcgagtcctttcctca
caactcttccacgtatggagtcttaaaagaggtgcgctgggtcagccagcgtgggttact
gtaggacagtggacccgtggtcgactagaacttgagggaggcattttgggactggtggga
ggactcggcaacagccagggacaaggccttggagctggtgtcagaggaggggatggtcaa
ggggatggctattttggaggacgctggagaccaggactttccgtcgaggaacaccgcctc
cgtgtggtgacattggttgaacatccatttgtcttcacgcgggaggtcgacgaggatggt
ctgtgtccagcaggtcaactctgtctggatcctaaaactaatcggactgatgtaatcaac
ggcctcttcaaccagcttcacaaccccaactctacagtgatagactgggaaggaattgat
ttgccaggggatctaaggaaatgctgctatgggtactgcattgacttgttggagaaactg
gcagaggatatgggatttacctttgacctttacattgtgggagatggaaagtacggcgcg
ttgagcgggacgggacgctggactggccttgtgggggacctcttgaatggaacagccgac
atggccgtcacctctttctccatcaactctgccaggagcagagtgatagatttcacttct
cccttttactccaccagtctgggaattctggttcgtagccgggacacggcagcgcccatc
ggagccttcatgtggccgctccactggtccatgtgggtcggcatttttgttacgttgcac
ctcacagcactcttcctcaccttgtacgagtggaacagcccgtttggcatgaccccccat
ggcagaaacaggctgcgtgtgttctcctactcgtctgccctcaatctctgctacgcaata
ctcttcggacgcaccgtcgccaccaagactcctaaatgctggacgggacgcttcttgatg
aacctctgggctattttctgcttactggtcctgtccagctacacagccaaccttgctgct
gttatggttggagagaaaaccttcgagcaggtttcaggaattcacgacgagaagctgcac
catccctctctgggcttccgttttgggacggtgagggagagcagcgccgaggactacatg
aagaagagtttcccagagatgcacgactacatgagacgctacaaccaacccacaacgcca
gagggtgtgcacatgctaaagacagatcctccggctctggatgcattcatcatggataaa
gccctgctcgactttgaggtctccattgatgcagactgcaagctgctcacagtggggaag
ccttttgccattgaaggctacggcataggccttccccagggctctcctctgacccgtaat
gtgtcagagtttgtgagtcgctacaagtctgacggcttcatggacatgctgcatgacaaa
tggtataaggttgtaccctgcggaaagagagtctttgcagtcactgagactctgcagatg
ggcatccagcatttttcaggtctgtttgtgttgctgtgcatgggtgtcggcggagctctg
ctgaccttggcaggtgaacacaccttctatcacctggtggtcccccgcctccggcgctcc
aacaccctgcagtactggctgcacaccagccagaaaatccacagagcgctcaacactaca
tatgaggatgtcgggaaggagctgaccggccttgaccaaaagccctcctcttgtatctca
gaaaactgcaccttacacaggaaacagcatcagccttctccgccgtcacctcccacgtcc
ctccctgcttccaccacagctggtgaaactggaagctcctcgccgtctcatgaacccaag
gagaaacgcgttcactttgacctggacacgcttcacagctaccgcctgcgcacgcacaca
gcgtcggtgcgtggccggccgggcatggtcggccgtcctggcctcggtctgggagggttt
ggcttcggcagcctgggcagctttacctccccgcctcagatcaatctccatgtcaacgga
ggaccggtctctacccttgcgtccacgggtttggtcctctctcccctgggaaatagggct
actcagaccagcctgtgggagggggaactgcaggagcttcaggtgaagatcgaaaccttc
cgcaaccagctgagagaagctctggcacgaagagctgagatccagaccagcctggacaga
gagaggagtgggctggtacgaagggacaccagtctggacagggaaagagacagacagaag
gtccagactatcaacacagacagaagcagttccactctgtccaaactcccagaaagagac
aggaccagccaactgcaaaccctgaacaatcagcagacaggaaggcccagccagacagct
ggagctggtaccgcggggctcggatggaccagccagttaaacacagtgaacagtttggac
agaggaagagccactcaatcatgccccgtcgttactatgacaggagaaaggactgtccag
tcacgcccttcgagtttggagcgaagtcaagtcaaccaacaaggtgctggaaacataact
gtccagacaaggaacacttctagcctggacagacagaaggccaacctatcacgcactctg
aacactttggagaggacaaaagccagccagtcaagtgtaagcagcggaacctga
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