Xiphophorus hellerii (green swordtail): 116709092
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Entry
116709092 CDS
T07363
Symbol
odc1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00330
Arginine and proline metabolism
xhe00480
Glutathione metabolism
xhe01100
Metabolic pathways
xhe04148
Efferocytosis
Module
xhe_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
116709092 (odc1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
116709092 (odc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116709092 (odc1)
Enzymes [BR:
xhe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
116709092 (odc1)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
116709092
NCBI-ProteinID:
XP_032403287
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Position
19:14792166..14796566
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AA seq
460 aa
AA seq
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MNTTTPNKFEFSFLEEGFSARDIVEQKINESSLTDDRDAFYVCDLGDVLRKHLRWARALP
RITPFYAVKCNDSQAVVMTLASLGTGFDCASKTEIQLVQSLGVDPSRIIYANPCKQVSQI
KYASAHGVQMMTFDSEVELMKVARCHDNAKLVLRIATDDSKAVCRLSVKFGAPLKACRGL
LERAKELGLDVIGVSFHVGSGCTDAETYTKAIADARCVFDMGEELGFNMDLLDIGGGFPG
SDDTELKFEEITVVINTALDKYFPVDSGVRVIAEPGRFYVASAYTLVVNIIAKKVIMDDE
SSSDEEDEGTSDRTLMYYVNDGVYGSFNCILYDHAHCLPTLHKKPKPDEAVYPCSIWGPT
CDGLDRIVELCTLPDLQVGDWLVFENMGAYTVAASSTFNGFQRPDIYYVMSRPAWQYVQQ
VCSQGLPAPVEESSLFDLPACCGRESSLDMSTKPCHAHVV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccacacccaacaaatttgaattttcctttcttgaagagggcttctctgct
cgggacattgttgagcagaaaatcaatgagtcatccttgacagatgatagggatgcattc
tatgtctgtgacttaggagatgttttacgaaaacatcttcgttgggcaagagctctgcct
cgcatcactcctttctacgccgtcaagtgcaacgacagccaggctgtagttatgacgctg
gcatcgttgggaactggcttcgactgtgcaagcaagacggagatccagcttgttcagtcc
ctgggagtggatccaagcagaataatctacgccaacccctgcaagcaggtctcacaaata
aagtacgcatctgcacacggagtccaaatgatgacctttgatagtgaagtggagctcatg
aaagtggcccgttgtcacgacaatgccaagttggtgttgcgcatcgccacagatgactcg
aaggctgtgtgtcgcctcagtgtgaagtttggtgctcccctcaaagcttgtcgcggtctc
ctggagcgggcaaaggaactggggctggatgtgatcggtgtcagttttcatgttggcagc
ggctgcactgatgcagagacctacaccaaagccattgcagatgctcgctgtgtctttgat
atgggggaagagcttggcttcaacatggatctcctggacattggaggaggttttcctggt
tcagatgacactgaactgaagtttgaagagattacagtagtaatcaacacggccctcgac
aagtactttcctgtcgactccggggtcagggtcatcgctgagccgggacgcttctacgtg
gcatctgcttacacattagtggtgaatatcattgctaagaaggtcatcatggatgacgaa
tcatcttcagatgaggaagatgaagggaccagtgacagaactctgatgtactatgtcaat
gatggggtgtatggctccttcaactgcatcctctatgaccacgctcactgtttgccgaca
ttgcataagaaaccaaaaccagatgaggcggtgtacccctgcagcatatggggccctaca
tgtgatggtctagatcggattgtggaactgtgtaccctgcctgacctccaggtgggggac
tggcttgtttttgagaacatgggtgcctacactgtagctgcttcctccacctttaatggc
ttccaaagaccagacatttactatgtcatgtcccgtcctgcctggcaatatgtgcagcaa
gtctgctcccagggccttccagctccggtagaggagtcctccttgttcgaccttccagca
tgctgtggccgagagagcagcttggacatgtccactaagccttgccatgcccatgtggtt
taa
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