Xiphophorus hellerii (green swordtail): 116713881
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Entry
116713881 CDS
T07363
Symbol
polr2g
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03020
RNA polymerase
xhe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116713881 (polr2g)
09124 Replication and repair
03420 Nucleotide excision repair
116713881 (polr2g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116713881 (polr2g)
03019 Messenger RNA biogenesis [BR:
xhe03019
]
116713881 (polr2g)
03400 DNA repair and recombination proteins [BR:
xhe03400
]
116713881 (polr2g)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
116713881 (polr2g)
Messenger RNA biogenesis [BR:
xhe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116713881 (polr2g)
DNA repair and recombination proteins [BR:
xhe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116713881 (polr2g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-GeneID:
116713881
NCBI-ProteinID:
XP_032410049
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All DBs
Position
23:complement(15464626..15468375)
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AA seq
227 aa
AA seq
DB search
MARTDITTSGAHDSFVIDPEVTLLWRFSAPFSTVQGEAVRPIKSIVCIKADINTDMFYHI
SLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPSRGF
VLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNP
PCYKTVDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggcccgaactgacattactactagcggcgctcatgactcttttgtcattgacccggaa
gtgactttactgtggagattttccgctccattcagtactgttcagggagaagcggttcgg
ccaataaaaagtattgtctgtattaaggcagacattaatacagacatgttttaccatatt
tctttggaacatgaaatcttactacacccgaggtattttggacccaacctgctgaacact
gtgaagcagaaactttttactgaagtagagggaacatgtactggcaagtatggctttgtc
attgcagtcaccactattgacaacatcggggcgggtgtaatccagccaagcagaggcttt
gttctgtatcccgtgaagtacaaggccattgtcttccgtccgttcaagggagaagtggtg
gatgctgtggtcactcaggttaacaaggttgggctattcacagaaattggtcccatgtct
tgcttcatctctcgccattccattccttcggaaatggagtttgaccccaattctaatcct
ccttgctataagactgttgatgaggatattgtaattcagcaagatgatgagatccggctg
aaaattgtgggcacaagggttgacaagaatgacattttcgcaattggatctctcatggat
gactatctgggtcttgtgagctga
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