Xiphophorus hellerii (green swordtail): 116716712
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Entry
116716712 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03266
Virion - Herpesvirus
xhe04145
Phagosome
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
xhe04810
Regulation of actin cytoskeleton
xhe04820
Cytoskeleton in muscle cells
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116716712
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116716712
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116716712
09144 Cellular community - eukaryotes
04510 Focal adhesion
116716712
09142 Cell motility
04820 Cytoskeleton in muscle cells
116716712
04810 Regulation of actin cytoskeleton
116716712
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116716712
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xhe04147
]
116716712
04515 Cell adhesion molecules [BR:
xhe04515
]
116716712
04090 CD molecules [BR:
xhe04090
]
116716712
Exosome [BR:
xhe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116716712
Cell adhesion molecules [BR:
xhe04515
]
Integrins
Integrin alpha subunits
116716712
CD molecules [BR:
xhe04090
]
Proteins
116716712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
116716712
NCBI-ProteinID:
XP_032413422
LinkDB
All DBs
Position
Unknown
AA seq
596 aa
AA seq
DB search
MLTRTGFPSISVLIGAPKANTSQPNVTEGGAVYHCSWSQNNCSVINFDQQGDRHFYINGV
NTQVEFKSHQWFGAIVRSHGNSILACAPRYYWRTEHDTPFSDITGTCYPSLLTLSKFVEF
APCRTERHGPAGQGYCQGGFSADFTKDGRVVLGGPGSFYWQGQLISATTEEIVKAYYHPS
YFLLSVAGQIQTRQVQXSYDDSYLGYSVTSGEFSGDAEEDFIAGVPKGLMLYGLVSVLSG
KDLKSVLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPTFMHPGFNGRLEELGKVYVY
LQRGPAXLEPAQTHLLGSQVFGRFGTSLAPLGDLNQDGFNDLAVGCPYGGDQQQGVVFVH
NGHAGGLKDTPTQVLSGQWASSSFPASFGFALRGDMDIDQNGYPDLIVGAFGLDKAVLYR
ARPIVRAGASLTMQPAMFSPEEKTCSLHRGNVSVSCVSTRFCLEAYGKHLPSHLGFLVEV
QLDRAKQNQKESVRRALFLESQQPTLLRTLNLTNGQGFCHEIKIYLRAEDEFRDKLSPID
ISLNFSLDGRVAADQHGLSPILDYQTEQRVEQKFRGIKRVQVSKPPFSAGEVEAVQ
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgttgactagaacaggattcccgagtatcagtgtccttattggagctccaaaagccaac
accagtcagccgaacgtcaccgagggaggagctgtgtaccattgttcctggagccagaac
aactgcagcgttatcaactttgaccagcaaggtgaccgccatttttacataaatggtgtg
aacactcaagttgaattcaagtcccatcagtggtttggcgctattgtgcgttcccatggt
aacagcatcttggcctgtgctcccaggtattactggaggacagaacacgacacgccgttc
tctgacatcacaggaacctgctacccttctctgttgacgctctcaaaatttgtggagttc
gccccgtgcagaacagaaagacacggccctgctggacagggttactgtcagggaggattc
agtgctgactttaccaaggatggaagggttgttcttggagggcctggcagtttttactgg
caaggtcagctgatttcagccactacagaggagatcgttaaggcctactaccacccctcc
tacttcctgctgtcggtcgctggacagattcagacccggcaggtccagnggagctacgac
gacagctacctgggttactctgtgaccagcggcgagttcagtggggacgctgaggaagat
ttcatcgcaggagttccaaaaggactcatgctgtatggtttagtgtccgttttaagtggg
aaggacctgaagtctgtgctgaacctgacgggtgaacagatggggtcttacttcggctac
gcagtggcggctactgacatcaacaacgacggattggatgatctggttgttggagcgccg
acattcatgcacccggggttcaacgggcgtctggaggagctggggaaagtgtacgtttac
ctccagaggggccctgcgnntctggagccggctcagacccatctgctgggctcacaggtc
ttcggtcggtttggcacctctctggctcctctgggtgacctcaaccaggatggcttcaac
gacttggccgtcggctgtccgtacggcggagaccagcagcagggcgtggtcttcgtccat
aacggtcacgctggaggactgaaggacacgcccactcaggttctttctggccaatgggct
tccagctctttccctgccagcttcggctttgctctgcgaggcgacatggacatcgatcag
aacggctacccagatctgattgttggtgctttcggccttgataaggccgtcctgtacaga
gcgcggccgatagtgagagccggtgcttctctcaccatgcagccggccatgttcagcccg
gaggagaagacctgttcgctccacagaggaaacgtctccgtttcctgtgtgagcaccagg
ttctgtctggaggcctatgggaagcacctcccctctcatttaggcttcctggtggaagtg
cagctagacagagcaaagcagaaccagaaggagtctgtgaggagggcgctgttcctggag
agccagcagcccaccctgctgaggaccctaaacctcacaaatggtcaagggttctgccat
gaaatcaaaatctacctgcgggccgaggacgagtttcgggataaactctctcccatcgac
atcagcctgaacttcagtctggatggtcgggtggcggcggatcaacacggcctcagtccc
atcctcgactaccagacagagcaacgtgtagagcagaagttcagaggaataaaacgcgtc
caagtctctaagcctccgtttagcgctggcgaagttgaagcagtccaatga
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