Xiphophorus hellerii (green swordtail): 116719889
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Entry
116719889 CDS
T07363
Symbol
raf1
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
KO
K04366
RAF proto-oncogene serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04012
ErbB signaling pathway
xhe04068
FoxO signaling pathway
xhe04140
Autophagy - animal
xhe04150
mTOR signaling pathway
xhe04210
Apoptosis
xhe04218
Cellular senescence
xhe04270
Vascular smooth muscle contraction
xhe04370
VEGF signaling pathway
xhe04371
Apelin signaling pathway
xhe04510
Focal adhesion
xhe04540
Gap junction
xhe04625
C-type lectin receptor signaling pathway
xhe04810
Regulation of actin cytoskeleton
xhe04910
Insulin signaling pathway
xhe04912
GnRH signaling pathway
xhe04914
Progesterone-mediated oocyte maturation
xhe04916
Melanogenesis
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116719889 (raf1)
04012 ErbB signaling pathway
116719889 (raf1)
04370 VEGF signaling pathway
116719889 (raf1)
04371 Apelin signaling pathway
116719889 (raf1)
04068 FoxO signaling pathway
116719889 (raf1)
04150 mTOR signaling pathway
116719889 (raf1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116719889 (raf1)
09143 Cell growth and death
04210 Apoptosis
116719889 (raf1)
04218 Cellular senescence
116719889 (raf1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116719889 (raf1)
04540 Gap junction
116719889 (raf1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116719889 (raf1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
116719889 (raf1)
09152 Endocrine system
04910 Insulin signaling pathway
116719889 (raf1)
04912 GnRH signaling pathway
116719889 (raf1)
04914 Progesterone-mediated oocyte maturation
116719889 (raf1)
04916 Melanogenesis
116719889 (raf1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
116719889 (raf1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116719889 (raf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xhe01001
]
116719889 (raf1)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
116719889 (raf1)
Protein kinases [BR:
xhe01001
]
Serine/threonine kinases: TKL group
RAF family [OT]
116719889 (raf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RBD
C1_1
Kinase-like
zf-RING-like
ABC1
Pkinase_fungal
C1_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
116719889
NCBI-ProteinID:
XP_032418612
LinkDB
All DBs
Position
1:21829882..21849278
Genome browser
AA seq
669 aa
AA seq
DB search
MEQFHGAWKTLSNGFGMKDSPFEGPCLSPTMVQGFTCQRRASDDSKMTDSKASSTIRVFL
PNQQRTVVNVRPGMTLYSCLIKALKVRGLQPQCCAVFKLHPGQRSKKSRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTYLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLCPTPGESGFPSLPQLTSRRMRESLTRLPSSAHRNSTPHVFNYTTSYP
PTGGGLSQRQRSTSTPNVHMVSTTLPVDSSMFELDCLSTSPSSWCRRFWLKRKVGIVHFS
ESESAEKEAMRDHDSAGSSPSQSPTGWTQSKAPAPSQRERASSFNTQEKNKIRPRDKRDS
SYYWEIEASEVYLHSHIGSGSFGTVYKGKWHGDVAVKILKVTDPTPEQLQAFRNEVAVLR
KTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHIHVLETNYTMIQLIDIARQTAQGMDY
LHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWTGSQQVEQPSGSILWMAPEVIR
MEDNNPYSFQSDVYSYGIVLFELMTGELPYSHIANRDQIIFMVGRGRLCPDLSKLYKNCP
KAMKRLVADCIKKSKEERPLFPQILSSIELLQHALPKINRSASEPSLHRAAQTEDINACT
LTTRLPVYT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggagcagtttcacggagcgtggaagaccctaagcaatggctttggaatgaaggactca
ccatttgagggcccctgcctgtcccctaccatggtccagggcttcacctgccagcgacgt
gcctcagacgacagcaagatgacggactccaaggccagcagcacaatccgtgtcttcctc
ccaaaccagcagcgcactgtggtcaacgtgcgaccaggtatgactctttacagctgtttg
atcaaagccctgaaggtgcgaggtctgcagccccagtgttgcgccgtcttcaagctgcat
cccggacagagaagtaaaaaatcccggatggactggaataccgattcaacctcactgata
ggagaagagctcctggttgaggttttagatcatgttcctttgacaacgcataactttgta
cggaagacctatttgaagctagccttctgcgacatttgccagaagtttctccttaatgga
ttccgttgccaaacatgcggctataaattccatgagcattgtagcaccaaagtgcccaca
atgtgtgtggactggagcaacattagacagcttctgttgtgtccaacaccaggtgagagt
ggcttcccgtccctgccacagctcacatcccgacgtatgagagaatccctaacccggctt
ccaagctcggcccatcgaaattccacccctcatgtcttcaactacaccacgtcgtaccca
cccacaggcggcggtctctcccagaggcagcgctccacatctacgcccaacgtccacatg
gtcagcacgaccctgcctgtagacagcagcatgtttgagctagactgtctgagtacctct
cccagttcctggtgccgcagattctggctgaagaggaaagtaggtattgtgcacttctcc
gagtcagagagtgccgaaaaggaagcgatgcgggatcatgactcagctggaagttccccc
agccagagccccacaggctggacccagtccaaagctccagcaccatcccagcgagagaga
gcctcgtccttcaacactcaggagaaaaataaaataaggccgcgggataagcgagactcg
agttattactgggaaattgaggccagcgaggtttatctacattcccacattggttcaggc
tcttttggaacagtatacaaaggaaaatggcatggtgatgttgcggtgaagattttaaag
gttactgatccaactccggagcagctccaggcattcagaaatgaagtcgccgtcctgagg
aaaacaagacatgtcaacatccttttgtttatgggctacatgacgaaggacaacctggcc
atcgtgacccagtggtgtgagggcagcagcctgtacaaacacattcatgtcctggagact
aattataccatgatccagcttatagatatcgctaggcagaccgctcagggcatggactat
ttacatgcaaaaaacataattcatcgtgacatgaagtccaacaacatcttcctgcatgaa
gggttaacagtaaaaattggggattttggtcttgcgactgtgaagtccaggtggaccgga
tcacaacaggtggagcagccctctggatccattctctggatggctcctgaggtgatccga
atggaggataacaatccgtacagcttccagtcagatgtctattcctatggaattgttctc
tttgagctgatgaccggagaactcccctactcccacatagcaaacagagatcagattata
ttcatggtgggaagaggccgcttgtgcccagacctcagtaagctctacaagaactgcccc
aaagcaatgaagagactggtggcagactgcatcaagaaatccaaggaagaaaggccgctg
tttccgcagatcttgtcctccattgagctcctccagcatgccctccctaagataaaccgc
agtgcctcagaaccgtccctgcaccgagccgcacagaccgaggacatcaatgcctgcact
ctgaccaccaggctgcctgtttacacatag
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