Xiphophorus hellerii (green swordtail): 116723004
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Entry
116723004 CDS
T07363
Name
(RefSeq) transcription factor E3-like isoform X1
KO
K09105
transcription factor E3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116723004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116723004
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
116723004
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
Motif
Other DBs
NCBI-GeneID:
116723004
NCBI-ProteinID:
XP_032423386
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Position
1:32898708..32906862
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AA seq
488 aa
AA seq
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MSDVGSDQVRTGEQNWSRTEPNQQEASVPQPHTVFVILDSAETLNLVQMESGIVADIEVD
SLIPTDSDIFYQIKSQPISISSPFSSSAASPSSSSSSSLPSVMSSRVLMRQGLMRQQALE
EQQKEAQQQKEAQRCSDSSSPISLANSAPCTPAQVPVEVLKVQTHLENPTRYHIQQAQRQ
QVRQYLSNTMTANQQPALQPSPSPQQDSGATLSDESSPKQEMEETVIDDIISLESSLNED
LLTLIDSGLQLTNTLPAAGNMLDVYGGMSTPTIAVSNSCPADLHAVKRELTDVETKALMK
ERQKKDNHNLIERRRRFNINDRIKELGALIPKSSDLETRWNKGTILKASVDYIRKLQKEQ
QRAREMEERQRRLESTNHSLLLRIQELELQARLHGVSSSSVSVDPQTLLSPLLPNPSLSF
MDLDESHQESAVFSTDLVAELGAGLSGLGAGLLMEEDGVGAVMSDPLLSCGASKTSSRRS
SFSMDEDL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgtcggctcggatcaggtccggaccggagagcagaactggagccgaaccgag
ccgaaccaacaggaggcctcggttcctcagcctcacaccgtgttcgtgatcctggactcg
gctgaaactctcaacttggtccagatggagtctgggattgtggccgacatcgaggtcgac
agtttgattcccacagacagtgacatcttctaccagatcaagagccagccaatcagcatc
agctctcctttcagttcctctgcagcatccccctcttcgtcatcttcatcgtctcttccg
tcggtgatgtcatcccgggttctgatgcgtcaggggctgatgcggcagcaggcgctggag
gagcagcagaaggaggcgcagcagcagaaggaggcgcagcgctgcagcgactcctcctct
cccatcagcctggctaactccgccccctgcacacctgcccaggttcccgtggaggtgcta
aaggtgcagactcacctggagaaccccaccaggtaccacatccagcaggcccagaggcag
caggtccgccagtacctgtccaacaccatgacagccaatcagcagccagcgctgcagcca
agcccctccccccagcaggactctggtgccacgctgtccgatgagagcagcccaaagcag
gagatggaggaaacagtcattgatgacatcatcagtcttgagtcgagtctaaacgaggat
cttctgactctgatcgactccggcctgcagctcaccaacacgctgccggcagccgggaac
atgctggacgtctacggagggatgtccacgcccaccatcgccgttagcaacagctgcccg
gccgacctgcatgccgtcaagcgggagctaacagatgtggagaccaaagctctgatgaag
gagcggcagaagaaggacaaccacaacctgatcgagaggaggcgtcgcttcaacatcaac
gaccgcatcaaggagctcggagcactgatccccaagtcctctgacctggaaaccaggtgg
aacaaaggcaccatcctgaaggcgtcagtggattacatccgcaaactgcagaaagagcag
cagagagccagagagatggaggagaggcagcgcaggctggagagcaccaaccactcgctg
ctgctgcgcatacaggagttggagctccaggctcgccttcatggcgtctcctcttcctcc
gtctctgtggacccccagacgctcctgtccccgctgctgcccaacccgtcgctgagcttc
atggacctggacgagtcccaccaagagtctgccgtcttctccacggacctggtggcggag
ttgggggcggggctgagcggcctgggggcggggcttctgatggaggaggacggggtcggg
gctgtgatgtccgacccgctgctgtcctgtggcgcctcgaagaccagcagccggcggagc
agtttcagcatggatgaggacctttga
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