Xiphophorus hellerii (green swordtail): 116723587
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Entry
116723587 CDS
T07363
Symbol
cxcr4
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03250
Viral life cycle - HIV-1
xhe03260
Virion - Human immunodeficiency virus
xhe04020
Calcium signaling pathway
xhe04060
Cytokine-cytokine receptor interaction
xhe04144
Endocytosis
xhe04672
Intestinal immune network for IgA production
xhe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
116723587 (cxcr4)
03260 Virion - Human immunodeficiency virus
116723587 (cxcr4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116723587 (cxcr4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116723587 (cxcr4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116723587 (cxcr4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116723587 (cxcr4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116723587 (cxcr4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xhe04030
]
116723587 (cxcr4)
04050 Cytokine receptors [BR:
xhe04050
]
116723587 (cxcr4)
04090 CD molecules [BR:
xhe04090
]
116723587 (cxcr4)
G protein-coupled receptors [BR:
xhe04030
]
Rhodopsin family
Chemokine
CXC Chemokine
116723587 (cxcr4)
Cytokine receptors [BR:
xhe04050
]
Chemokine receptors
CXC Chemokine
116723587 (cxcr4)
CD molecules [BR:
xhe04090
]
Proteins
116723587 (cxcr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
COX2_TM
Motif
Other DBs
NCBI-GeneID:
116723587
NCBI-ProteinID:
XP_032424506
LinkDB
All DBs
Position
7:complement(23591330..23593308)
Genome browser
AA seq
376 aa
AA seq
DB search
MEEDDYTEYSDNNTYNISEEFAEFELNIPEPCGQLLSSKFNKIFLPTVFGIIFILGIVGN
GLVIAVMGYQKKVKTMTDKYRVHLSVADLLFVLTLPFWAVDAAKTWYFGGFLCVSVHVIY
TLNLYSSVLILAFISLDRYLAIVHATNSQAKRKLLANRVIYVAVWLPAAILTVPDLVFAR
VQDVNSSNYWFAEDSMESADSRTICQRIYPRESSLIWTVVFRFQHILVGFVLPGLVILVC
YCIIISKLSQGAKGQVLKRKALKTTVILIICFFGCWLPYCTGIFLDTLIMLDVVRTSCEL
QQAVETWISITEALAYFHCCLNPILYAFLGVKFNNTARSTLTNSSKSSQKVTLMAKKRGQ
ISSVSTESESSSVLSS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggacgactatactgagtattctgataacaacacctacaacatctccgaggag
tttgcagagtttgagctaaacatcccggagccatgtggtcagttactcagcagcaagttc
aacaagatcttcctcccaacggtttttggaataatattcatcctcgggattgtcggcaat
ggactggtcattgccgtcatgggctaccagaagaaggtcaaaacgatgacagacaagtac
cgggtccacctctctgtggctgacctcctgttcgtcctcacgctgcccttctgggccgtg
gacgcagccaagacgtggtactttggaggcttcctctgcgtttcggtgcacgtgatctac
acgctgaacctgtacagcagcgtcctgatcctggccttcatcagcttggacaggtacttg
gcgattgtccatgccaccaacagccaggccaaaaggaagctgctggccaacagggtgatc
tatgttgcagtgtggcttccggctgccatcctgactgtgcctgacctggtgtttgcccga
gtccaggatgtaaactcctccaactactggtttgcggaggacagcatggagagtgccgat
tccagaactatctgtcagcgcatctaccctagggaaagcagtctgatttggacggtggtt
tttcgcttccagcacatcctggtgggcttcgtcctgcccggactggtcatcctcgtctgc
tactgcatcattatctccaagctctcccaaggcgccaagggccaggtgctgaagaggaaa
gctctgaagaccacagtgatcctcatcatttgcttcttcggatgctggctgccctactgc
accggcatctttttggacacgcttataatgctggacgtcgtgcgcacgtcttgtgagctg
cagcaggcggtggagacgtggatctccatcaccgaagcattggcctacttccactgctgc
cttaaccccatcctctatgcctttctgggggtgaagttcaacaacaccgccaggagcacg
ctcacaaatagcagcaaatcaagccagaaagtgactctcatggccaaaaagcgcgggcag
atttcttctgtgtccacagaatccgagtcttccagcgttttatcgagttaa
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