Xiphophorus hellerii (green swordtail): 116723826
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Entry
116723826 CDS
T07363
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04510
Focal adhesion
xhe04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116723826
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116723826
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
RasGEF_N_2
WbqC
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
116723826
NCBI-ProteinID:
XP_032424900
LinkDB
All DBs
Position
1:complement(4360027..4453242)
Genome browser
AA seq
1846 aa
AA seq
DB search
MSNLLAIEMPIKMIHLSLLVLALNAFGQELPSIPHGCTDGSCYPATGNLLIGRAVNLTAT
STCGLDGPEQFCIVSYLQDPEKCFECDSRRRYDPRHHRNSHRIENVIYLTDINGNENFWK
SVNGKEDVSIRLNLEAEFHFTHLIMKFKTFRPAALIIERSADFGRTWRPYRYFAKNCTRT
FPGIPANGLHHTNDIICEERYSDIEPSKDGEVIFKVLDPAIPVEDPYSLDIQELLRITNL
RINFTKLNTLGDDLLDRRSDVLQKYYYAINELVVRGSCFCYGHASECAPVPGVNTHETGM
IHGRCVCKHNTEGLNCERCKVFHNDSPWRPAETEDPHTCRECNCNGHTNQCHFDMAVYLA
TGNTSGGVCDNCLHNTVGRNCEMCKPFYYQDPNRDIRDPRVCVACDCDPVGSLEGGVCDS
HTDLGMGMITGQCRCKDNVKGKRCDDCKAGYYGLSESDPLGCQPCNCDPRGVILMDAPCD
QISGDCSCKRYVTGRYCNQCLPEYWGLSNDLVGCRPCECDFGGAFNNRCMMDSGQCDCRR
HFIGRRCSEVQPGYFCAPLDYYKYEAEEAAGRSPTDPSLPGQVRPQAADDCIQQLSNQAR
RHRRHRRISSLQQSQAALRRIRQLQQTPDVTTVHREHTPSHITTWTGPGFARVKDGAGLV
FTIDNIPYAMEYEVMIRYEPESTEDWEAVVSITSAELPSSLRCGNLLPTEQLYTETLLHS
NRYILMSRPFCFEPSNRYVVAIRFQRHGVGYRHLTAFILIDSLVLIPKYTELPGFHGSDP
DTEQHRKDMVRYMCLDSFMITPMPTLAEMCTKLICGISANIHDGALPCQCDPQGSISGEC
DKVGGQCRCKANVIGRRCEQCAPGTYGFGVNGCNACDCHPEGSFNHQCDPVTGQCPCRQG
ATGRQCSDCQPGQWGFPSCSPCQCNGHADLCDSRTGECRGCRDNTAGHLCERCVESFYGN
PVLGSGDHCHPCPCPGNPGSNHFNGHSCQADHTSDQIICYCKPGYTGPRCDQCAPGYYGN
PEQPGGQCLRCECNDNIDPQDPESCDPRTGQCLRCLYHTDGPSCSQCEEGYFGNALIRDC
RRCTCVTAGTVESACSEGQCLCDHYTGACPCRGSVMGNNCDQCAPNHWNYGQAEGCQPCN
CDQRHSERDRCNMFTGQCPCWPGFGGQRCTECQEHHWGDPEVECRECSCHPLGSQIRQCN
RATGQCDCNDGMAGLRCDECARGFTGVFPNCVPCHQCFDQADDHLCQIRRDLEHIQYAVQ
KILESGITPGVGINRIMELEQKLNQVRNLIDTGNTEQIHQLIGQSIDDLRPEIVLINSRL
TGIDQDTNKTKEADKVLKRALTDLEKELMDVNATLARKQELLDKYLTSGFSDQFDKVKKY
YQLSQQAEEKCNASVLFPTSPVEQSKQNRGITEKMLNATKDELLRNLTAHNNSLNELHQK
TQNLSETVRHLSQMVCGGASNASQNGSCSDNRCGCHDNQGNFVCGGEGCDGTKSSSLTAL
KDATNLTDSLKAAMKELQGVTKKLQDIASQTQDVKNRTMNALEKAQKKKEYFEKSNKDLK
DLIKTIKDFLTEEGADPESIQKVAQQVLDIKLPINRTTVDKLINQINSSIANLTNVQDIM
NQTSQLIRNAQDLMNKAKEAERQAVGVRDLVNSTKQALNVSEVAIEKAKAALKEARDNLN
RTKNSTAEVENGLVQLEDKQMDIMMRLTNLSKGVDALKNKTEINRLMAKDAINLANNASH
QASTLEQELNVTEKRYRELQLKMETLGSSGSLNNIQQKVKDMTQAAEDLLSKANNGINDL
DKLGELLKNNEERMKEQLEELEGLKQNATDVRDQIQKGVQKYSTCS
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacctcttggccatcgagatgcccatcaaaatgattcatttgagccttctggtg
ctggctctgaatgcatttggacaggagcttccgtcgatccctcacggctgcactgacgga
agctgttaccctgcaaccggaaaccttctgattggacgagctgtcaacctgaccgccacc
tcaacatgcggtctggacggaccggagcagttttgcattgtcagctacctgcaggatcca
gaaaagtgtttcgagtgtgactcccgtcggcggtatgatccccgccaccacagaaacagc
caccgcattgaaaacgtgatctacctcacagacatcaatgggaatgagaacttttggaag
tctgtcaatggtaaggaggacgtcagcatcagactgaaccttgaggctgaattccacttc
acacatctcatcatgaagtttaagacgtttcgccctgcagctttgatcatagagcgatca
gctgattttggccgcacatggcgcccctaccgctacttcgccaagaactgtaccagaact
ttccctggaatccccgccaacggcttgcaccataccaacgacatcatctgtgaagaacgc
tactctgatatcgagccctctaaagatggagaggtcatttttaaagtgctggatccagca
attccagtagaagatccctacagcttggacattcaagaacttttgcgcatcaccaacctg
cgcatcaacttcacgaagctcaacacgctgggagacgacctgctggaccgccgctcagac
gtcctgcagaaatattactatgccattaatgagctggtggtccgaggaagctgcttttgc
tacggacacgcttcagagtgcgcaccagtgccgggcgtaaacacccatgagactggcatg
atccatggccgctgtgtttgcaagcacaatactgaagggctgaactgcgagcgctgcaag
gttttccacaatgactcaccttggagaccagcggagacagaggacccacacacatgcaga
gagtgtaactgcaacggccacacaaaccagtgtcactttgacatggcggtgtatttggcg
acgggcaacaccagcggtggagtttgtgataactgtctgcacaacacagtgggacgcaac
tgtgagatgtgcaaaccgttctactaccaagaccccaacagggatatccgggaccctcgt
gtctgtgttgcttgcgactgtgacccggttggatcattggagggaggtgtgtgtgacagc
cacaccgacctgggaatggggatgatcacaggacagtgtcgctgcaaagacaacgtgaag
ggcaagcgctgcgatgactgcaaggcgggttattatggactcagtgagagcgacccactg
ggatgccaaccttgcaactgtgacccccggggcgtcatactgatggatgctccttgtgat
cagatcagtggggactgctcctgtaaaagatacgtcacaggtcgctactgcaaccagtgt
ctgcctgaatactggggtctcagtaatgacctggttggctgcagaccttgtgagtgcgac
ttcggtggagcgttcaacaacagatgcatgatggatagtgggcagtgcgactgcaggcgg
catttcattggtcgacggtgttcggaggtgcagcctgggtatttctgtgctccactcgac
tactacaaatacgaggctgaagaggctgccgggcgctcgcccactgatccctcgctgccg
ggccaggtccgtccgcaggcagcagacgactgcattcagcagctcagcaaccaggcgagg
aggcatcggcgacaccggcgcatttcaagcctgcagcagtctcaggcagcgctgagacgc
atccggcagcttcagcagacaccggacgtcacgacggtccacagagagcacactcccagc
cacatcaccacctggaccggtcccgggtttgctcgcgtcaaagacggcgccggcttggtg
ttcaccatcgacaacatcccatacgccatggagtacgaagtcatgattcgctacgagcct
gagtccacagaggactgggaggctgtagtcagcatcacctctgctgagctcccctcaagt
ctccgatgtggaaaccttcttccgaccgaacagctctacactgaaaccctgctgcacagc
aacagatacatcctgatgtccaggccattttgttttgagcccagtaatcgctacgtggta
gcaatcaggttccagcgacacggagtcggttacagacaccttaccgctttcattttgatt
gactcactggttttgatccccaagtacaccgagcttcctggtttccacggcagcgacccg
gacacagagcagcaccggaaggacatggtccgctacatgtgcctggattcctttatgatc
acgccgatgccaacgctggctgagatgtgcaccaaactcatctgcggcatctcagccaac
attcacgatggggccctgccctgtcagtgcgaccctcagggttccatcagcggcgagtgc
gataaggtcggaggtcagtgccgctgtaaagctaacgtcattgggcggcggtgtgagcag
tgcgccccaggaacctacggcttcggagtgaacggctgcaatgcctgtgactgccaccca
gagggctccttcaaccaccagtgtgacccggttacaggtcagtgtccgtgcaggcaggga
gccaccgggcgccagtgctccgactgccaaccgggccagtggggcttccccagctgcagc
ccctgtcagtgtaacggccacgccgacctctgtgactcccggacaggagagtgcagaggc
tgcagggacaacacagcgggtcacctctgcgaacgctgtgtggaaagtttctacggcaac
ccagtgctcggctcgggggatcactgtcacccctgcccctgccctggaaaccctggttcc
aaccactttaatggccattcctgtcaagctgaccacacctctgatcagatcatatgttac
tgcaaaccaggctatacaggtcctcgctgcgatcagtgtgctccaggctactacggcaac
ccagagcagcccggtggacagtgtctccgctgcgagtgcaatgataacatcgacccccag
gatccggagtcatgtgaccccaggactgggcagtgcctcaggtgcctgtaccacacggac
gggccgtcctgttcccagtgcgaggaaggatacttcggcaacgctttgatcagggactgc
agacggtgcacctgtgtgactgctggcactgtggagtcagcctgcagtgaaggacagtgt
ctctgtgaccactacactggggcctgtccttgcaggggttctgtgatgggcaacaactgt
gaccagtgtgcccccaaccactggaattacggtcaggctgaaggctgccagccgtgcaac
tgtgaccagcggcattctgagagggaccggtgcaacatgttcacaggccagtgtccgtgt
tggcccggtttcggaggacaacgttgcaccgagtgccaagagcaccactggggcgaccca
gaggtggagtgtagagagtgctcctgtcacccgctgggctcacagatacgccagtgtaac
cgagcaacagggcagtgcgattgcaacgatgggatggcggggctccggtgcgatgagtgc
gcgcgcggcttcacgggcgtcttccccaactgtgtcccgtgtcatcagtgcttcgatcag
gcggacgaccatttgtgccagatcagaagagacttggagcacatccaatacgccgtccag
aagatcctggagagcggaatcacgcccggagtcgggatcaaccgcatcatggagcttgag
cagaagctgaaccaggtgcgaaacctgattgatacggggaacacggaacagatccaccag
ctgattggacagagcatcgatgacctcagacctgagattgttctcattaactcacgtctg
acgggaatcgatcaagacacaaacaaaactaaagaggcggacaaggtcttaaaacgcgct
ctgactgacctggagaaagaactgatggatgtcaatgctacgctggctcgcaaacaggag
ctgctggacaagtacctcacctcaggattttcagatcagtttgacaaagtgaagaagtac
taccaactgtcacagcaggctgaggagaagtgcaacgcctcggtgttgtttcctaccagt
ccagttgaacaatccaaacaaaatcgagggattaccgagaagatgctgaacgccacaaag
gacgagctcctccggaatctaaccgctcacaacaattcattaaacgagctgcatcagaag
acccaaaacctcagtgagacggtccgacatctcagccaaatggtgtgtggtggtgctagt
aatgccagccaaaatggcagctgctctgacaaccggtgtggttgccatgacaatcagggt
aactttgtttgtggaggagagggatgcgatgggacaaagagttcttctttgactgcgctg
aaggatgccacaaacctcaccgacagtctgaaagctgccatgaaggagctgcagggcgtc
actaagaagcttcaggacatagcttcccagacccaggatgtgaagaaccggacaatgaac
gctctggagaaagcccagaagaagaaagaatactttgaaaaaagcaataaagaccttaaa
gacttgattaagaccatcaaagacttccttacagaggagggagcagatcctgagagcatc
cagaaggtagcccagcaggtcttggacatcaagctgccgatcaacaggaccactgtggac
aaactgatcaaccagatcaacagcagcattgccaatctcaccaacgttcaggacattatg
aatcaaacttcgcagctcatccgcaatgctcaagacctgatgaacaaagctaaagaagca
gagagacaagcagtgggtgtgagggatctggtcaatagcaccaaacaagccttaaatgtc
tctgaggtggccatagagaaagcaaaggcagccctgaaggaggcccgggacaacctgaac
aggaccaagaactccactgctgaggtggaaaatgggttggtgcagcttgaggacaagcag
atggacatcatgatgcgtctaaccaatctgtccaagggggtggacgccctaaagaacaag
acagagataaacagactaatggcaaaggacgccataaacctggctaacaacgccagtcac
caggcatccacactggagcaggagctaaatgtaacagagaaacgttaccgtgagctgcag
ttgaagatggagactcttggcagctctggaagtctgaacaacatccaacagaaggtcaaa
gatatgacgcaggctgcagaagatctcctcagtaaagccaataatgggataaatgatctt
gacaaactaggggaattattgaaaaacaacgaggagcggatgaaggagcagcttgaggag
ctggagggcctgaagcaaaacgccactgatgtgagagaccaaattcagaaaggagtgcag
aaatatagtacctgctcgtga
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integrated database retrieval system