KEGG   Xiphophorus hellerii (green swordtail): 116723826
Entry
116723826         CDS       T07363                                 
Name
(RefSeq) laminin subunit beta-2-like
  KO
K06243  laminin, beta 2
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe04510  Focal adhesion
xhe04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116723826
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116723826
SSDB
Motif
Pfam: Laminin_EGF Laminin_N LAMININ_IV_B F5_F8_type_C RasGEF_N_2 WbqC Alanine_zipper
Other DBs
NCBI-GeneID: 116723826
NCBI-ProteinID: XP_032424900
LinkDB
Position
1:complement(4360027..4453242)
AA seq 1846 aa
MSNLLAIEMPIKMIHLSLLVLALNAFGQELPSIPHGCTDGSCYPATGNLLIGRAVNLTAT
STCGLDGPEQFCIVSYLQDPEKCFECDSRRRYDPRHHRNSHRIENVIYLTDINGNENFWK
SVNGKEDVSIRLNLEAEFHFTHLIMKFKTFRPAALIIERSADFGRTWRPYRYFAKNCTRT
FPGIPANGLHHTNDIICEERYSDIEPSKDGEVIFKVLDPAIPVEDPYSLDIQELLRITNL
RINFTKLNTLGDDLLDRRSDVLQKYYYAINELVVRGSCFCYGHASECAPVPGVNTHETGM
IHGRCVCKHNTEGLNCERCKVFHNDSPWRPAETEDPHTCRECNCNGHTNQCHFDMAVYLA
TGNTSGGVCDNCLHNTVGRNCEMCKPFYYQDPNRDIRDPRVCVACDCDPVGSLEGGVCDS
HTDLGMGMITGQCRCKDNVKGKRCDDCKAGYYGLSESDPLGCQPCNCDPRGVILMDAPCD
QISGDCSCKRYVTGRYCNQCLPEYWGLSNDLVGCRPCECDFGGAFNNRCMMDSGQCDCRR
HFIGRRCSEVQPGYFCAPLDYYKYEAEEAAGRSPTDPSLPGQVRPQAADDCIQQLSNQAR
RHRRHRRISSLQQSQAALRRIRQLQQTPDVTTVHREHTPSHITTWTGPGFARVKDGAGLV
FTIDNIPYAMEYEVMIRYEPESTEDWEAVVSITSAELPSSLRCGNLLPTEQLYTETLLHS
NRYILMSRPFCFEPSNRYVVAIRFQRHGVGYRHLTAFILIDSLVLIPKYTELPGFHGSDP
DTEQHRKDMVRYMCLDSFMITPMPTLAEMCTKLICGISANIHDGALPCQCDPQGSISGEC
DKVGGQCRCKANVIGRRCEQCAPGTYGFGVNGCNACDCHPEGSFNHQCDPVTGQCPCRQG
ATGRQCSDCQPGQWGFPSCSPCQCNGHADLCDSRTGECRGCRDNTAGHLCERCVESFYGN
PVLGSGDHCHPCPCPGNPGSNHFNGHSCQADHTSDQIICYCKPGYTGPRCDQCAPGYYGN
PEQPGGQCLRCECNDNIDPQDPESCDPRTGQCLRCLYHTDGPSCSQCEEGYFGNALIRDC
RRCTCVTAGTVESACSEGQCLCDHYTGACPCRGSVMGNNCDQCAPNHWNYGQAEGCQPCN
CDQRHSERDRCNMFTGQCPCWPGFGGQRCTECQEHHWGDPEVECRECSCHPLGSQIRQCN
RATGQCDCNDGMAGLRCDECARGFTGVFPNCVPCHQCFDQADDHLCQIRRDLEHIQYAVQ
KILESGITPGVGINRIMELEQKLNQVRNLIDTGNTEQIHQLIGQSIDDLRPEIVLINSRL
TGIDQDTNKTKEADKVLKRALTDLEKELMDVNATLARKQELLDKYLTSGFSDQFDKVKKY
YQLSQQAEEKCNASVLFPTSPVEQSKQNRGITEKMLNATKDELLRNLTAHNNSLNELHQK
TQNLSETVRHLSQMVCGGASNASQNGSCSDNRCGCHDNQGNFVCGGEGCDGTKSSSLTAL
KDATNLTDSLKAAMKELQGVTKKLQDIASQTQDVKNRTMNALEKAQKKKEYFEKSNKDLK
DLIKTIKDFLTEEGADPESIQKVAQQVLDIKLPINRTTVDKLINQINSSIANLTNVQDIM
NQTSQLIRNAQDLMNKAKEAERQAVGVRDLVNSTKQALNVSEVAIEKAKAALKEARDNLN
RTKNSTAEVENGLVQLEDKQMDIMMRLTNLSKGVDALKNKTEINRLMAKDAINLANNASH
QASTLEQELNVTEKRYRELQLKMETLGSSGSLNNIQQKVKDMTQAAEDLLSKANNGINDL
DKLGELLKNNEERMKEQLEELEGLKQNATDVRDQIQKGVQKYSTCS
NT seq 5541 nt   +upstreamnt  +downstreamnt
atgtccaacctcttggccatcgagatgcccatcaaaatgattcatttgagccttctggtg
ctggctctgaatgcatttggacaggagcttccgtcgatccctcacggctgcactgacgga
agctgttaccctgcaaccggaaaccttctgattggacgagctgtcaacctgaccgccacc
tcaacatgcggtctggacggaccggagcagttttgcattgtcagctacctgcaggatcca
gaaaagtgtttcgagtgtgactcccgtcggcggtatgatccccgccaccacagaaacagc
caccgcattgaaaacgtgatctacctcacagacatcaatgggaatgagaacttttggaag
tctgtcaatggtaaggaggacgtcagcatcagactgaaccttgaggctgaattccacttc
acacatctcatcatgaagtttaagacgtttcgccctgcagctttgatcatagagcgatca
gctgattttggccgcacatggcgcccctaccgctacttcgccaagaactgtaccagaact
ttccctggaatccccgccaacggcttgcaccataccaacgacatcatctgtgaagaacgc
tactctgatatcgagccctctaaagatggagaggtcatttttaaagtgctggatccagca
attccagtagaagatccctacagcttggacattcaagaacttttgcgcatcaccaacctg
cgcatcaacttcacgaagctcaacacgctgggagacgacctgctggaccgccgctcagac
gtcctgcagaaatattactatgccattaatgagctggtggtccgaggaagctgcttttgc
tacggacacgcttcagagtgcgcaccagtgccgggcgtaaacacccatgagactggcatg
atccatggccgctgtgtttgcaagcacaatactgaagggctgaactgcgagcgctgcaag
gttttccacaatgactcaccttggagaccagcggagacagaggacccacacacatgcaga
gagtgtaactgcaacggccacacaaaccagtgtcactttgacatggcggtgtatttggcg
acgggcaacaccagcggtggagtttgtgataactgtctgcacaacacagtgggacgcaac
tgtgagatgtgcaaaccgttctactaccaagaccccaacagggatatccgggaccctcgt
gtctgtgttgcttgcgactgtgacccggttggatcattggagggaggtgtgtgtgacagc
cacaccgacctgggaatggggatgatcacaggacagtgtcgctgcaaagacaacgtgaag
ggcaagcgctgcgatgactgcaaggcgggttattatggactcagtgagagcgacccactg
ggatgccaaccttgcaactgtgacccccggggcgtcatactgatggatgctccttgtgat
cagatcagtggggactgctcctgtaaaagatacgtcacaggtcgctactgcaaccagtgt
ctgcctgaatactggggtctcagtaatgacctggttggctgcagaccttgtgagtgcgac
ttcggtggagcgttcaacaacagatgcatgatggatagtgggcagtgcgactgcaggcgg
catttcattggtcgacggtgttcggaggtgcagcctgggtatttctgtgctccactcgac
tactacaaatacgaggctgaagaggctgccgggcgctcgcccactgatccctcgctgccg
ggccaggtccgtccgcaggcagcagacgactgcattcagcagctcagcaaccaggcgagg
aggcatcggcgacaccggcgcatttcaagcctgcagcagtctcaggcagcgctgagacgc
atccggcagcttcagcagacaccggacgtcacgacggtccacagagagcacactcccagc
cacatcaccacctggaccggtcccgggtttgctcgcgtcaaagacggcgccggcttggtg
ttcaccatcgacaacatcccatacgccatggagtacgaagtcatgattcgctacgagcct
gagtccacagaggactgggaggctgtagtcagcatcacctctgctgagctcccctcaagt
ctccgatgtggaaaccttcttccgaccgaacagctctacactgaaaccctgctgcacagc
aacagatacatcctgatgtccaggccattttgttttgagcccagtaatcgctacgtggta
gcaatcaggttccagcgacacggagtcggttacagacaccttaccgctttcattttgatt
gactcactggttttgatccccaagtacaccgagcttcctggtttccacggcagcgacccg
gacacagagcagcaccggaaggacatggtccgctacatgtgcctggattcctttatgatc
acgccgatgccaacgctggctgagatgtgcaccaaactcatctgcggcatctcagccaac
attcacgatggggccctgccctgtcagtgcgaccctcagggttccatcagcggcgagtgc
gataaggtcggaggtcagtgccgctgtaaagctaacgtcattgggcggcggtgtgagcag
tgcgccccaggaacctacggcttcggagtgaacggctgcaatgcctgtgactgccaccca
gagggctccttcaaccaccagtgtgacccggttacaggtcagtgtccgtgcaggcaggga
gccaccgggcgccagtgctccgactgccaaccgggccagtggggcttccccagctgcagc
ccctgtcagtgtaacggccacgccgacctctgtgactcccggacaggagagtgcagaggc
tgcagggacaacacagcgggtcacctctgcgaacgctgtgtggaaagtttctacggcaac
ccagtgctcggctcgggggatcactgtcacccctgcccctgccctggaaaccctggttcc
aaccactttaatggccattcctgtcaagctgaccacacctctgatcagatcatatgttac
tgcaaaccaggctatacaggtcctcgctgcgatcagtgtgctccaggctactacggcaac
ccagagcagcccggtggacagtgtctccgctgcgagtgcaatgataacatcgacccccag
gatccggagtcatgtgaccccaggactgggcagtgcctcaggtgcctgtaccacacggac
gggccgtcctgttcccagtgcgaggaaggatacttcggcaacgctttgatcagggactgc
agacggtgcacctgtgtgactgctggcactgtggagtcagcctgcagtgaaggacagtgt
ctctgtgaccactacactggggcctgtccttgcaggggttctgtgatgggcaacaactgt
gaccagtgtgcccccaaccactggaattacggtcaggctgaaggctgccagccgtgcaac
tgtgaccagcggcattctgagagggaccggtgcaacatgttcacaggccagtgtccgtgt
tggcccggtttcggaggacaacgttgcaccgagtgccaagagcaccactggggcgaccca
gaggtggagtgtagagagtgctcctgtcacccgctgggctcacagatacgccagtgtaac
cgagcaacagggcagtgcgattgcaacgatgggatggcggggctccggtgcgatgagtgc
gcgcgcggcttcacgggcgtcttccccaactgtgtcccgtgtcatcagtgcttcgatcag
gcggacgaccatttgtgccagatcagaagagacttggagcacatccaatacgccgtccag
aagatcctggagagcggaatcacgcccggagtcgggatcaaccgcatcatggagcttgag
cagaagctgaaccaggtgcgaaacctgattgatacggggaacacggaacagatccaccag
ctgattggacagagcatcgatgacctcagacctgagattgttctcattaactcacgtctg
acgggaatcgatcaagacacaaacaaaactaaagaggcggacaaggtcttaaaacgcgct
ctgactgacctggagaaagaactgatggatgtcaatgctacgctggctcgcaaacaggag
ctgctggacaagtacctcacctcaggattttcagatcagtttgacaaagtgaagaagtac
taccaactgtcacagcaggctgaggagaagtgcaacgcctcggtgttgtttcctaccagt
ccagttgaacaatccaaacaaaatcgagggattaccgagaagatgctgaacgccacaaag
gacgagctcctccggaatctaaccgctcacaacaattcattaaacgagctgcatcagaag
acccaaaacctcagtgagacggtccgacatctcagccaaatggtgtgtggtggtgctagt
aatgccagccaaaatggcagctgctctgacaaccggtgtggttgccatgacaatcagggt
aactttgtttgtggaggagagggatgcgatgggacaaagagttcttctttgactgcgctg
aaggatgccacaaacctcaccgacagtctgaaagctgccatgaaggagctgcagggcgtc
actaagaagcttcaggacatagcttcccagacccaggatgtgaagaaccggacaatgaac
gctctggagaaagcccagaagaagaaagaatactttgaaaaaagcaataaagaccttaaa
gacttgattaagaccatcaaagacttccttacagaggagggagcagatcctgagagcatc
cagaaggtagcccagcaggtcttggacatcaagctgccgatcaacaggaccactgtggac
aaactgatcaaccagatcaacagcagcattgccaatctcaccaacgttcaggacattatg
aatcaaacttcgcagctcatccgcaatgctcaagacctgatgaacaaagctaaagaagca
gagagacaagcagtgggtgtgagggatctggtcaatagcaccaaacaagccttaaatgtc
tctgaggtggccatagagaaagcaaaggcagccctgaaggaggcccgggacaacctgaac
aggaccaagaactccactgctgaggtggaaaatgggttggtgcagcttgaggacaagcag
atggacatcatgatgcgtctaaccaatctgtccaagggggtggacgccctaaagaacaag
acagagataaacagactaatggcaaaggacgccataaacctggctaacaacgccagtcac
caggcatccacactggagcaggagctaaatgtaacagagaaacgttaccgtgagctgcag
ttgaagatggagactcttggcagctctggaagtctgaacaacatccaacagaaggtcaaa
gatatgacgcaggctgcagaagatctcctcagtaaagccaataatgggataaatgatctt
gacaaactaggggaattattgaaaaacaacgaggagcggatgaaggagcagcttgaggag
ctggagggcctgaagcaaaacgccactgatgtgagagaccaaattcagaaaggagtgcag
aaatatagtacctgctcgtga

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