Xiphophorus hellerii (green swordtail): 116724072
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Entry
116724072 CDS
T07363
Symbol
apc
Name
(RefSeq) adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04310
Wnt signaling pathway
xhe04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
116724072 (apc)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116724072 (apc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116724072 (apc)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116724072 (apc)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116724072 (apc)
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116724072 (apc)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
116724072 (apc)
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
116724072 (apc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APC_r
Arm_APC_u3
APC_rep
Arm
APC_N_CC
SAMP
Suppressor_APC
APC_15aa
APC_u14
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
116724072
NCBI-ProteinID:
XP_032425293
LinkDB
All DBs
Position
8:157998..174468
Genome browser
AA seq
2203 aa
AA seq
DB search
MAAASYDQLLRQVEVLKMENSNLRQELQDNSNHLTKLETEASNMKEVLKQLQGTIEEESG
EASGSQLELIERLKEMSLDPAGFRTRTRAPPPPSSSSSSASSSSGTMAGASGGSGGPGAQ
GPNPAAFPRRGAPTAGREGHDRCLEELEKEKSLLLAELEKEEKEKDWYYAQLQNLTKRID
SLPLTENFTLQTDMSRRQLEFEARQIRSAMEEQLGSCQEMERRAQARVSRIQQIEKDIVK
LGARLQVEGAQSAGDGGGLAVAQSSSSRLDQESANETSYSVPRRITSHLGTKVEMVYSLL
SMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGNDKDSLLLGNSRGSKEA
RARASAALHNIVHSQPDDKRGRREIRVLHLLEQVRHYCEACWSWQESHERGVDQEDNPMP
SPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAVAELLQVDCEMFGLSSDHYSVTLRR
YAGMALTNLTFGDVANKATLCSMKGCMRAMVAQLKSESEDLQQVIASVLRNLSWRADVNS
KKTLREVGSVRALMGCALEVQKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGT
LTHRSHTNTLAIIESGGGILRNVSSLIATNEAHRQILREHGCLPTLLQHLKSHSLTIVSN
ACGTLWNLSARDARDQETLWELGAVGMLRNLIHSRHKMIAMGSAAALRNLMANRPARYKD
ASVVSPGAGAPSLHARKQKALFEELDAQQLSETFDNIDNLSPKAANRKGRSCNGAGSSTT
RSYTNTPVLSSPKGSEGVKRASEEAAYARPAFPPSVRASSDSLNSVTSTDGYGNRGKTKP
SSDVFYSSDESAANKCCVYRKYPADLAHKIRSANHMADDDGAELDTPINYSLKYSDEQLN
SGRQSPSQDGEPDTRLRRGNSSEAGQSGGRMAAGQPPRYVVVSATSSYGGDAVPEQPIDY
SLKYGDESARKETAIPSLAPPTSSSTNKLRNLPATAHSEVKSNQESTQIYYVEDTPICFS
RGSPLSSLSSEEDEDADVVRKSKGSGNDYPTLPVSEKDAQEQQQRQQKEAESQTSAVPST
RGRRGHHHHHGHHHHHHHHVTSSSGARTPKSPPEPPYAQETPLMFSRCTSVSSLDSFSTS
SIASSVRSSEPCSSEPSGVVSPSDLPDSPGQTMPPSRAKTPPPPAQGDAPTQGAKKEEEG
DVLLHFATESTPHGFSRASSLSALSLDEPYIAAEMKEAAAAGGEETKPVPLKPILDESDD
DNEILVACINMAMPKSSQKPKKPPPAAPRKPSQLPVYKLLPPQSQPPPPQRKEVPPLLEE
VPRVYCVEGTPLNFSTATSLSDLTIDSPPNEEAAPPPSAPRTRPAVPEGENGDDILAECI
SAAMPKAKPRKPIRTPDSGQAPPPPMSPPTLPQMKKKPTSPVKPMPQRAPYGVVAATATK
PKPGFAFDSPRHYTPIEGTPCCFSRNDSLSSLDFEEDEAGEKDGEDRKSKEEENRKRKQQ
TVAIFPRTKPPANQTVVDEKQKFAMDDTPVCFSRNPSLSSLSDIDQENNNKEFAQPPQHE
EEEEEEEEEEALPAAGQVESKPRPPAASGYAPKAFHVEDTPVCFSRNSSLSSLSIDSEDD
LLQECISSAMPKKKKKSTAPPDATSPTATPPATVLPAAPVPFAKADEDILAEEEPSEAPR
SPPSPDSESFDWKAIQEGANSIVSSLNAAASALSRQPSSDSDSVLSLKSVGSPFHLPAAG
RTTEDDEAALQVKRCARILKPGERSSLEAKRKEEEEEEEAKALRGGKKVYRSLITGKPRA
EPAARGRSKPRAAAAAKAPRGADSADRGGGSSRDSTPSRTSAPANQKAGKLSQLPRTASP
GSASSSSSSRAAKTAPKGGGLPRSESASRLVGSAPSRKQKAEPEKPALVRQSTFIKEAPS
PTLKRKLEESSSSAAVEPQSSPETPLPPATHRSHSESPSRPQEVTSSRISRTGTWKREAS
GGGSGVSGGKHSTSLPRVGTWKRTGSSSSVLSASSESSEKGRGEDGGRSDAKGTWRKMKS
GGESTAAKSEDVWVRLEDCPVNNPRSPSACSARSPTAANAPPVIDSPAPSKIPSSSSSCS
SNLNLRRSCESLEEQAPPPPDRQQQRSQPRSGAVAARVSPFNYTPSPRKNGAELSSAPSQ
PAGGTSAPPARPSLIPTPVTKKREPKGGDGGGGERGSYIVTSV
NT seq
6612 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgtcctatgaccagctgctgaggcaggtggaggtgctgaagatggagaac
tccaacctgagacaggagctgcaggacaactccaaccacctgaccaagctggagacggag
gcgtccaacatgaaggaagtgctgaagcagctgcagggcaccatagaagaagagtccggg
gaggcgtccggctcccagctggagctcatagagcgactgaaagagatgagtttggacccg
gccggcttcagaaccagaaccagggctcctccacctccttcgtcgtcctccagctctgcc
tcctcttcctctggaacgatggcgggagcctccgggggatctggggggcccggggcccag
gggccgaacccggccgccttccccaggagaggagctccgactgcggggagagaaggccac
gaccgctgcctggaggagctggagaaggagaagtccctcctattggctgagctggagaag
gaggagaaggagaaggactggtactacgctcagctccagaacctcaccaagaggatcgac
agcctgccgctcaccgagaacttcacgctgcagacagacatgagtcgccgtcagctggag
ttcgaggctcgccagatccgctcagccatggaggagcagctggggtcctgtcaggagatg
gagaggagagctcaggctcgtgtgtctcgtattcagcagatagagaaagacatcgtgaag
ctgggcgcccgactgcaggtggagggcgctcagagtgcaggggatggtggtggattggct
gtagctcagagctccagcagccgattggaccaggagtctgctaatgagacaagttactca
gtgcctcgacgaatcaccagccaccttggaacaaaggtggagatggtgtacagcctgctg
tccatgctggggactcacgacaaggacgacatgtcgcgcacgctgctggccatgtccagc
tcgcaggactcctgcatcgccatgcgccagtctggctgcctgccgctgctcatccagctg
ctgcacggcaacgacaaggactccctgttgctaggtaactctcgcggaagcaaggaggca
cgagcgcgggcgtctgccgctctgcacaacatcgtccacagccagccagacgacaagcga
gggcgacgcgagatccgggttctgcacttgctggagcaggtccgccattactgcgaggcg
tgctggagctggcaggagagccacgagaggggcgtcgaccaggaggacaaccccatgccg
tctcctgtagagcatcagatctgcccagccgtctgcgttctcatgaagctgtccttcgac
gaggagcaccgccatgccatgaatgagctgggaggtctccaggcggtggcggagctgctg
caggtggactgtgagatgttcgggctgagcagcgaccactacagcgtcaccttgaggcga
tacgctggcatggcgctcaccaacctcaccttcggagacgtggccaataaggccacgctg
tgctccatgaagggctgcatgagagccatggtggcccagctcaagtccgagagcgaagac
ctgcagcaggtgatagccagtgtcctgaggaacctgtcgtggcgcgctgatgtcaacagc
aagaagacgttgcgtgaggtcggcagcgtgcgagcgctgatgggctgtgctcttgaagtg
cagaaggagtcgacgctgaagtccgtactgagcgcgctctggaacctgtcggcccactgc
acggagaacaaggcggacatctgcgcggtggacggcgctctggccttcctggtgggaacg
ctcacgcaccgcagccacaccaacactctcgccatcatcgagagcggcggagggatcctg
cgcaacgtctccagcctcatcgccaccaacgaggcgcacaggcagatcctgcgggagcac
ggctgcctgccgactctgctgcagcacctgaagtcgcacagcctgaccatcgtgtccaac
gcctgcggcacgctgtggaacctatcggcgcgggatgcccgcgaccaggagacgctgtgg
gagctgggggctgtgggcatgctgcgcaatctcatccattcccgccacaagatgatcgcc
atgggcagcgccgccgccttgcgcaacctaatggccaaccgccctgcacgctacaaggac
gccagtgtggtgtcgcccggcgccggcgcaccatcgctccacgcccgcaaacagaaagcg
ctgtttgaggagctggacgcccagcagctgtcagagacctttgataacatcgacaacctg
agccccaaagccgccaacagaaaggggcggagctgcaacggcgctggaagcagcaccaca
cgctcctacaccaacacgccggtgctgtccagcccgaaaggcagcgagggagtgaagaga
gcaagcgaggaggcggcatacgcacggccggcgttcccgcccagcgtccgcgcctccagc
gatagcctcaacagcgtgaccagcactgatggctacggcaaccgcggcaagaccaaaccg
tcctccgacgtcttctactcctctgacgagagcgccgccaacaagtgctgcgtctacagg
aagtacccagcggacctggcacacaagatacgcagcgccaaccacatggcagacgatgat
ggcgccgagctggacacgcccatcaactacagcctgaagtactcggacgagcagctgaac
tcgggacggcagagtccgagccaggacggcgagccggacacccggctgcgccgtggcaac
agcagcgaagcgggacagagtggcggccgcatggcggcagggcagccgccacgatacgtc
gtcgtctcggcaacatcctcctatggtggtgacgccgtaccagagcagccgatcgattat
agcctgaagtatggagatgagtcggcgcgcaaagagactgccatcccctcgctagctcct
cccacttcctcctccaccaacaagctccgcaacctgccagccaccgcgcactctgaggtc
aagagcaaccaggagtcaacgcagatttactatgtggaggatacgcccatctgcttctcc
aggggaagccccctgtcctctctgtcctctgaggaagatgaggatgctgatgttgtgagg
aaaagtaaaggcagcggcaacgactacccgacacttcctgtcagcgagaaagacgctcag
gagcagcagcaacggcagcagaaggaggcagagagtcagacgtcggccgtgccatccaca
agaggacgaaggggccaccaccaccaccacggccaccatcatcaccatcaccaccacgtg
acctcatcgtcaggcgccaggacccccaaaagccccccagagccgccgtatgcgcaggag
acgccactgatgttcagccgctgcacgtcggtcagctcgctggacagcttctccacgtcg
tccatcgccagctcggtgcgctccagcgagccgtgcagcagtgagccgagcggcgtggtg
agtcccagcgacttgcctgacagcccgggtcagaccatgccgcccagtcgcgccaagact
ccgccgccgcccgcccagggcgatgcgccgacgcagggcgccaagaaggaggaggagggg
gacgtgctgctacactttgctacggagagcacaccgcacggcttttcccgtgcctccagt
ctgagcgcgctcagtctggacgagccatacattgcggccgagatgaaggaggcggcagcg
gcgggcggcgaggagacgaagccagtgcctctcaagcccattctggacgaatctgacgat
gacaacgagatcctggtggcgtgtatcaacatggccatgcccaagtcctcccagaagccc
aagaagcctccgccagcagcgccacggaaacccagccagcttcctgtctacaagctcctc
ccaccgcagagccagccgccgccaccgcagaggaaggaggtgccaccattgctggaggaa
gtgccccgtgtttactgtgtggagggaacgccgctcaacttctccaccgccacgtcgctc
agcgacctcaccatcgactcgccacccaacgaggaggcagctccgcccccgtcggccccc
agaacccggccggcggtccctgagggcgaaaatggcgacgacatcttggccgagtgcatc
agcgccgccatgcccaaagccaagccccgcaaaccaatcagaacaccagacagtggccag
gccccgcccccgcccatgtctccgccaacactgccacagatgaagaagaaacccacctcc
cccgtgaagcccatgcctcagcgggcgccatatggtgtcgtcgcagcgacagccaccaaa
cccaagccgggattcgccttcgactcgcctcgccactacacgcccatcgaggggacgcca
tgttgcttctcacgcaacgactcgctgagctctctggacttcgaagaagacgaggccggt
gagaaggacggtgaggacagaaagagcaaggaggaggaaaacaggaagcggaagcagcag
acagtcgccatcttcccccgcaccaaaccgccggccaatcagacggtggtggacgagaag
cagaagtttgccatggacgacacgcccgtctgcttctccaggaacccgtcactgagctcg
ctgagcgacatcgaccaggagaacaacaacaaggagttcgcccagcccccgcagcacgag
gaagaggaggaggaggaggaggaggaggaggcacttcctgctgctggacaggtggagtcg
aagccccgcccccctgcggccagcggctacgcccccaaagcgtttcacgtggaggacacg
cccgtctgtttttccaggaactcgtccctcagctccctcagcatcgactcggaggacgac
ctgctgcaggagtgcatcagctccgccatgcccaagaagaaaaagaagtccaccgcacca
cccgatgccacatctcccaccgccacgccacccgccaccgtgctgcccgccgcccctgtt
cccttcgccaaggcagatgaggacatcctggcggaggaggagccctcggaggcgccccgc
agtccgccgtctccggactctgagtccttcgactggaaggccatccaggaaggagccaac
tccatcgttagcagcctgaacgccgccgcctcggccctgtcccgccaaccgtcctcggac
tccgactccgtcctgtccctgaagtccgtcggctcgcctttccacctgccggcggctggc
cggaccaccgaggacgacgaggcagcgttgcaggtcaagcgctgcgcccgcatcctgaag
cctggcgagcgcagcagcctagaggccaagaggaaggaggaggaggaagaggaggaggcg
aaggccctgcgtggagggaagaaggtctaccgcagtctgatcacaggaaaaccccgggcg
gagcccgctgccagggggcgaagcaaaccccgagctgccgctgccgccaaggctccaaga
ggcgccgactctgccgacagagggggcgggtcctctcgtgactccaccccttcccggacc
tctgcgccggccaatcagaaggcgggaaaactgtcccagctgccacgtactgcctctcca
ggaagtgcctcgtcatcatcttcctccagagccgccaagaccgcgccgaaaggcggcggc
ctcccccggagcgaatcagcctcccggctcgtcggctccgccccatccaggaagcagaag
gcggagccagagaagccagcgctggtccgccagtcaaccttcatcaaggaagctccgagc
cccacgctgaagaggaagttggaggagtcttcctcctccgctgccgtggagccgcagtcc
agccccgagacgccgcttccccccgccacccatcgctcgcactcagagagcccgtcacgc
ccgcaggaagtaacctcatcacgtataagccgcaccggcacctggaagcgtgaggccagc
ggcggcggctccggagtgagcggcgggaaacactcgacctcgctgccgcgcgtcggcacc
tggaagcggactggaagctcctcctccgtgctgtcggcgtcctcagagtccagcgagaag
gggcggggtgaagacggtggccgcagtgacgccaaggggacatggcggaagatgaagagc
ggtggcgagtcgacggctgccaagtcggaggacgtctgggtccgcctggaggattgtccc
gttaacaacccgcgctcgccgtccgcctgctcagcgcgctcgcctaccgccgccaacgcc
ccgcccgtcatcgatagccccgccccctccaagatcccctcttcttcctcttcgtgctct
tccaacctcaaccttcgacggagctgtgagagcctggaagagcaggctccgccccctcct
gaccgccagcagcaacgcagccagccgcgcagcggtgccgtggcggcgcgcgtcagtcca
ttcaactacacgcccagccccaggaagaacggcgccgagctaagctccgctccctcgcag
cctgccggcggcacgtcggccccgccggcgcggccctcgctcatccccacccccgtgacc
aagaagcgagagccgaagggcggagacggtggcggcggcgaacgcggctcctacattgtc
acgtctgtgtga
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integrated database retrieval system
