Xiphophorus hellerii (green swordtail): 116725689
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Entry
116725689 CDS
T07363
Symbol
grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116725689 (grin3b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116725689 (grin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116725689 (grin3b)
Ion channels [BR:
xhe04040
]
Ligand-gated channels
Glutamate (ionotropic)
116725689 (grin3b)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
116725689
NCBI-ProteinID:
XP_032427802
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Position
9:complement(32567017..32590185)
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AA seq
1216 aa
AA seq
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MSLTSSLSWFRTFRTLRTFLVVQLLLGPGYHLHPQPCHLLAHIGHAVRVGALLPAQREAR
LQVQAALSRTAAALSRDRNRDQDPDPERVNFLPYNLSVELVSRQLAAADPESLIRCACQR
VLERGVSAALAFPQSREELLQVDLLAAALRVPVVSLIEHAEPLRTQNRFHLQMVTGVPES
VLSDLLLAVLRRSGWREGTVVLCRGWEEAGGLLRFLDSQTSSPWDGLGAVTWHLQALLNL
TQSAHDDTQIHDFLSRHFRRNQPPPAAVLLFGADPECAAAVLRSAQDLGLTLPLVHWVLG
QPLSPDVLHTFGLPLGLLAYGEVDRKPLDFYIRDALQLITRAIAAATVVRPDLVLVQNTV
SCHDTPEAPTAGQYLSRFLANTSFSGLTGLVGVDQNRSLVLTSQRFHIWSLRRDALGQPA
WVTVGSWEDGQLQVEDQEVWQGPKPRRRAEGSGGRRGGRWRPGTPVAGTRVRVVTLVEHP
FVFTRDVDDDSSCPAGQFCLDAGTNSSETLEHYFREVAAGNGSSLPLEYRKCCYGYCIDL
LEKLAEDLGFHFDLYIVGDGKYGAWKGGRWTGLVGDLLSGLTDMAVTSFSINSARSRVID
FTSPFFSTSLGILVRSKDTAAPIGAFMWPLHWSMWVGIFLALHITALFLTLYEWKSPFGM
TPHGRNRVRVFSYSSALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTAN
LAAVMVGEKTFEEVSGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRRFNEP
TTPEGVATLKTDPPQLDAFIMDKALLDYEVSIDAECKLATVGKPFAIEGYGIGLPQNSPL
SSNLSEFISRYKSDGYMDLLHDKWYKVVPCGNRVFAVTETLQMGISHFSGLFVLLCVGVG
GALLTLAGEHGFYRLVLPHIRRRQNLKYWLHTSQKIHRALNLTYDDVKRQRAEREKSCSL
EKTQGGQGPAGPQVSPGPSVPAAAARWNNESRKETPAAADARDFKRVHFSLETLNTRRLL
ARLAVSEAKEGGAKVDRAEPMKPRAGPSSRLCENGGPAASLASLVLSLPSSSSVRTNAPP
LPGVTPPIPVVTQPHPDATPPVPDTAPPLRVVVPPLPAELAALQQQIDQMREKLRAALAR
RAEIQTSLAKPVSMATTSPPPVLVTSTGIPSPTLPAITMATSLSPNRKSVTTMTTPPHRV
LSKVPPLRSRLSNQQR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcacctcttcgttgtcctggttccggactttccgaactctccgaaccttcctg
gtcgtgcagcttctcctgggtccggggtaccacctccacccgcagccctgccacctcctg
gcgcacatcggacacgcagtgcgcgtcggtgcgctcctgccggcgcaacgggaggctcgt
ctccaggtccaggcggcgctgagccgcacggcggccgctctgagccgggaccggaaccgg
gaccaggatccggaccccgagcgggtgaacttcctgccctacaacctgagcgtggagcta
gtgtcccggcagctggccgccgcggacccggagtccctcatccggtgcgcgtgccagcgc
gtgctggagcgcggagtttccgccgcgctcgccttcccgcagagccgcgaggagctgctg
caggtggatctgctggccgccgcgctgcgcgtgcccgtcgtcagcctcatcgagcacgcg
gagccgctgcgcacgcagaaccggttccacctgcagatggtgacaggggttccagaatct
gttctgtctgatctgttgctggcggttctgcggcggtccggttggagggaggggacggtg
gttctgtgccgaggctgggaggaggcgggtggcctcctgcggttcctggactcacagacc
tctagtccttgggacggattgggcgcggtcacctggcacctgcaggcactgctgaacctg
acccagtcggcccatgacgacactcagatccacgacttcctgtcccgacatttcagacgg
aaccagcctccacctgcagcggtgctgctgttcggagcagaccccgagtgcgcagcggcg
gtgctgcgcagcgcccaggacctcggactgactctacccctggtccactgggttctgggc
cagccgctcagtcccgacgtgctgcacacctttggcctgccgctcggcctgctggcctac
ggagaggtggaccggaagccgctcgacttctacatcagagacgccctgcagctgatcacc
agagccatcgccgcggcgaccgtggtgagaccagacctggttctggtccagaacacggtg
agctgccacgacacaccagaggcaccaacagcagggcagtacctgtccaggttcctggcc
aacacctccttctctggactgacaggtctggttggcgttgaccagaaccgctctctggtt
ctgacctcgcagcggttccacatctggagcctgcggcgggacgcgctgggccagccggcc
tgggtgacggtgggcagctgggaggacggccagctacaggtggaggaccaggaggtgtgg
caggggcccaaaccccggcgccgggccgaggggtcgggtggacggagggggggccgctgg
aggcccgggacgcccgtggcggggacgcgggtccgggtggtgaccctggtggagcatccc
tttgtgttcacgcgggacgtggacgatgatagcagctgccccgccggccagttctgcctg
gacgccggcaccaacagctcagagactctggagcactacttccgggaggtggcggccggg
aacggcagctcactgcctctggagtacaggaagtgttgctatggttactgcatcgacctg
ttggagaagctggctgaagacctgggcttccactttgacctctacatcgtcggagacgga
aagtacggagcgtggaagggtggccgctggacggggttggtgggcgacctgctgagcggc
ctgaccgacatggccgtcacctccttcagcatcaactccgcccgcagccgtgtcatcgac
ttcacctcgccctttttctccacaagcctgggcatcctggtgcggagcaaggacacggcg
gcccctatcggagccttcatgtggcccctgcactggtccatgtgggtgggcatcttcctg
gcgctccacatcaccgcgctcttcctcaccctgtacgagtggaagagtccgtttgggatg
acgcctcacggtcgcaacagggtcagggtgttctcctactcctcggctctgaatctgtgc
tacgccatcctgtttgggcgaacggtgtcgtccaagacgccaaagtgctggaccggccgc
ttcctgatgaacctgtgggccatcttctgcctactggtgctgtccagctacaccgccaac
ctggcagccgtcatggtgggggagaagacctttgaggaggtctctgggatccacgacgcc
aagctgcaccatccatcgcagggcttccgctttgggacggtgagagagagcagcgctgaa
gattacatgaagaagagcttcccagaaatgcacgagtacatgcggcgcttcaacgaaccg
acaacgcctgaaggagtcgccaccctaaagacagatcctcctcagctcgatgccttcatc
atggacaaggccctactggactacgaagtttccattgatgccgagtgtaaactggcaacg
gttgggaaaccctttgccatcgaaggttatggcatcggactcccccagaactctccgctg
agctccaacctgtccgagttcatcagcaggtacaagtccgatggctacatggacctgctg
cacgacaagtggtacaaggtggttccctgtgggaaccgagtgttcgccgtgaccgagact
ctgcagatgggcatcagtcacttttctggactcttcgtgttgctgtgcgtcggagtgggc
ggagctctgctgaccctcgcaggtgaacatgggttttaccgactcgtcctgccgcacatc
cgccgccggcagaacctgaagtactggctgcacacgtcccagaagatccaccgagcgctg
aatctgacgtacgacgacgtgaagaggcagcgggccgagagggagaaaagctgtagcctg
gagaagacccagggagggcaggggcccgcgggtccccaggtgtccccggggccctcagta
cccgctgccgctgccaggtggaacaacgagtcaaggaaggaaactccagctgctgcagat
gctcgagacttcaagcgagttcacttcagtctggagaccctgaacacgcggcgcctgctg
gcgcgcctggcggtctcagaggcgaaggagggcggggccaaggttgacagggcggagcct
atgaaaccaagggcggggccaagcagccggctgtgtgagaatgggggacctgcagcttca
ctggccagtctggtgctctcactgccctcctcttcctctgtgaggaccaatgccccgccc
cttccgggtgtgactcctcccattccagtagtaactcaaccccatcctgatgcaaccccg
cccgtccccgatacggccccgccacttcgggtggtggtcccgccccttcctgcagaactg
gcggcgctgcagcagcagatcgatcagatgcgggagaagctgagggctgcgttggctcgc
cgggcggagatccagacctcactagccaagcctgtttctatggcaaccaccagcccacct
ccagttttggtgacttctacagggatcccatcccccaccttacctgccatcaccatggca
acaagcctttctccaaacaggaagagcgtaacgaccatgacaaccccccctcacagggtg
ctgtccaaagtcccgcccctccgcagcaggctgtccaatcagcagaggtga
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