Xiphophorus hellerii (green swordtail): 116727964
Help
Entry
116727964 CDS
T07363
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00780
Biotin metabolism
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
116727964 (hlcs)
Enzymes [BR:
xhe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
116727964 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
116727964 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
116727964 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
116727964 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
ThuA
Motif
Other DBs
NCBI-GeneID:
116727964
NCBI-ProteinID:
XP_032431560
LinkDB
All DBs
Position
11:299333..324756
Genome browser
AA seq
910 aa
AA seq
DB search
MVDKMLITLCYVYMWVRFHKCYSVLIRNSLSRLRSRKNSLCLSFCSGSSSVSAPPTAPPP
GLHTAAPHFQQPFPPEDNVFLQLGDKAVYVTEAQACDDLSQWTVLGSSLIDAQRIDNISF
IIEAAENQVGYPPATNKQVLKWSDYCFPLAFSPGQPFRAVAQTSLDNFSRLGVAFIEDRL
QLDSGLVPSKIVPVLLQDSTFSKVLELQCLERPQPVGALLLSSTTPEEGLCESISQLLPA
DQQNLHFRKGSLLLPPEAKKRLQERRGSEPLPNSQTVHLESHHHHMEGYGHHLHLSSCHE
CLELENSTILSVKYASAENIPDLPDDTSVGVDSVDGCLAELEHDSLGFFGKAPNILVYTG
GCEERFQAIYQLLLDCINVENNTIYPLLQEQALSDPWLDNTRLLVLAEEESLTAELQTRF
LTYLSKGGKVLGLGSALCPAGLHLEVKEEQCLQCRKLIFTREDSTELEATILASGKVYIR
DPQGGGEVELWGELRSDVANQREMVIVRLTHGADGGEAVFCQVHFDIASYSKKMDSKDFD
ELKVSNALRYEILTEVLNSLGVSCEPSQTPAPSPVYLLATSQDAKESFLKFLDTWADEDA
IVRFSKASFRVGPEPHEGPSDFLSLVTESQEMTQFVMETYCKNLKTNHLGNTLLYTEVTT
STMNLLEGMVQHLPKNTGLIAVAARQTQGRGRGRNAWLSPLGCAMFTVGVQVELNSKLGQ
RIPFLQHLAALAIVEAVRTLPGYQEIDVRVKWPNDIYYSNLMKLGGVLVTSTFVGSTFHL
LIGCGFNVTNSNPTVCINDLIQQYNTQNGCSLEPLSCSQFIALTLNCLQTLITSFQQRGP
DAVLPTYYKRWLHSGTQVRLWSEEGPEAQVVGLDDNGFLQVCSKEEGMVSVEPDGNSFDM
LKNLVVMKQH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggtggataaaatgttaataactctgtgctatgtctatatgtgggtccgttttcacaag
tgttactcggtgctgatccgcaacagtctgtccaggctgagaagcaggaagaacagcctc
tgtctcagcttctgttccggctccagctcggtctctgcgccccccacagcaccgccccca
ggactccacacagccgctccacatttccagcagccgtttcctcccgaggacaatgttttc
ctccagctcggagacaaggccgtctatgtcacggaggctcaggcgtgtgatgacctcagc
caatggactgttcttggatcctctttaattgatgctcaacgaatagataatatttcattc
ataatagaagctgcagagaaccaagtgggatatcctcctgcaacaaataagcaagtgctg
aagtggtctgactactgtttccccctggccttcagcccgggccagccattcagggcggtg
gcacagactagtctagataacttcagccgtcttggggtcgcttttattgaagatcgcctt
caactggacagtggactggtgccttcaaagatagtccctgttttgctccaagacagcact
ttcagtaaggtgttggaactgcagtgtcttgagaggccacagcctgtgggggcgctctta
ctttcgtccactactcctgaggagggcctttgcgagtcaatctctcagctgttgcctgct
gaccagcagaacctgcacttccgtaaaggtagtctcctgttaccccctgaggcaaagaag
aggctgcaggaacggcggggatcagaacctctgcccaactctcaaactgttcatttggaa
tcccatcatcaccacatggagggctatggacaccaccttcatctctccagctgccatgaa
tgtttagagctggagaacagcaccatcctttctgtcaaatatgcctcggctgagaacatt
ccagatctacctgatgacacctctgtgggggtggatagtgtggatgggtgtctggctgaa
ctagaacatgattctttggggttttttggaaaagcaccaaacattcttgtgtacacaggt
ggatgtgaggaacgtttccaagcaatttatcagcttttgttagactgcataaatgtggaa
aacaacactatttatcccctcctgcaagaacaagcgctaagtgacccatggctggacaac
accaggcttctggttttggcagaagaggaatcattgactgctgagcttcagacccgcttt
cttacttacttaagtaagggtgggaaggtgctagggctgggctccgctttgtgcccggca
ggtctccatctggaagttaaggaagaacaatgcctccagtgtaggaagttgatcttcacc
agagaagacagcacagagctggaagcaaccattctggcaagtggaaaggtctacattcgg
gatcctcagggaggaggggaagtggagctctggggggagctgagaagtgacgtcgccaac
cagagagaaatggttattgtcaggctaacccatggagctgacggtggggaagctgtcttc
tgtcaggttcattttgacattgcatcctactcaaagaaaatggattcaaaagatttcgat
gagctgaaggtcagcaatgcactgcgatatgaaattttgacagaagtccttaattccttg
ggagtcagctgtgaaccaagccagactcctgccccaagtcctgtctatctgctggccacc
tcccaggatgccaaggaaagttttctgaagttcctggacacatgggcggatgaagatgct
attgttcgattctccaaagcctccttcagggtagggcctgaaccacatgaaggtccctcg
gactttctgtccttggtcacagaatcccaagagatgacccaatttgttatggagacttac
tgcaaaaatctgaagaccaaccatctgggaaacaccctgctctacactgaggttaccact
tctaccatgaacctgctggaagggatggtgcagcacttacctaagaacactggtttgata
gcagtagctgctcgacaaacacaaggaagaggccgaggcagaaatgcttggctcagccca
ctaggctgtgcaatgttcacagttggggtccaagttgagctgaactccaagcttggtcaa
agaattcctttcctgcaacatttggctgctttagccatcgtggaagctgttcgcacactt
cctggatatcaggaaatagatgtgagagtgaagtggcccaatgatatctactacagtaac
ctgatgaagcttggaggagttctggtaacatcgacttttgtaggatcaacttttcatctg
cttataggatgtggctttaatgtgacaaacagcaaccccacagtatgcattaatgacctg
atccagcagtacaacacacagaacggctgcagcctggagcccctcagctgctctcagttc
atcgctctcactctgaactgcctccaaactctcatcaccagtttccagcaaagaggccca
gacgctgttctgcctacttactataaaagatggcttcacagtgggactcaggtccgtctg
tggagtgaggaaggaccagaagcgcaggtggttggtctggatgacaacggctttctccaa
gtgtgcagtaaagaggaaggaatggtctctgtggagcctgatggaaactcgtttgacatg
ttgaagaaccttgtggtcatgaagcagcactag
DBGET
integrated database retrieval system