Xiphophorus hellerii (green swordtail): 116729983
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Entry
116729983 CDS
T07363
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116729983 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116729983 (prdm6)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116729983 (prdm6)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
116729983 (prdm6)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116729983 (prdm6)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116729983 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
116729983
NCBI-ProteinID:
XP_032434798
LinkDB
All DBs
Position
12:1454875..1524324
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AA seq
618 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPPPPPPAPPPDRLSIAVDALRPS
RLHAHLLACTSSSSSSSTSSSAAPSSSSSISAPAGLAQLPVPQQIALFGQALAPAPGAAA
DLVVVVPPDNQQGHNPAAELLQQAKEQRCAAVGVVSSSVKSGGGGAEESGKAAGGRCKLT
SEELDYYLYGQQRMEIIPLSNHTGELNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTA
APVPLPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGVPLLVDRLHS
GAVRNTRHLWEIYDSEGTLQHFIDGNDPSKSSWMRYIRCARHCGEQNMMVVQYRSCIFYR
ACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPATVVEAMSRQESLQSFSKNSK
PSSSSSSSSSPPAALLRSMVFPHAPCSRSFSLLDKVGVGVQSDSGFGQLGSKNQRVLASP
TSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHCSQSFSQPSELR
NHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQR
LPNECKPVNDSTESIEVD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggtgaccccagcggttcggccttcctcaaggtggacccgtcctacctg
cagcactggcagcagctcttcccgcaggcccagctcaaggctccgctggccccgccaccg
cctccacctgcgcctccaccagaccgcctctccatcgccgtggacgccctgcgcccgtcc
cgcctgcacgcgcacctcctggcctgcacatcctcttcctcatcttcctccacctcctcc
tccgcagctccttcctcctcctcctccatctccgcccccgcaggcctcgctcagctgccc
gtcccgcagcagatcgcgctcttcgggcaggcgctggccccggcgccgggggccgcggcg
gacctggtggtggtggtccccccggacaaccagcagggccacaacccggcggcggagctc
ctccagcaggccaaggagcagcggtgcgcggcggtcggggtggtgtcgtccagcgtgaag
agcggcggcggcggcgcggaggagagcgggaaggctgcgggggggcgatgcaagctgacc
tccgaggagctggactactacctgtacggccagcagaggatggagatcatcccgctgagc
aaccacaccggggagctcaacaaccgttgcgacatgtgtgcagataacaggaacggtgag
tgtccgatgcacggccctcttcactcgctgcgccgcctggtgggcaccagcagcactgca
gcgcctgttcctctgccggacgtccctgattggctgagggatctgcccagagaggtgtgt
ctctgcaccagtacggttcccggtctgggttatgggatctgtgccgcccagaggatcccg
cagggaacctggatcgggccgttccagggcgtccccctcctggtggacagactgcactcc
ggggccgtcaggaacaccagacacctgtgggagatctatgattcagagggaacattgcag
cactttatagatggaaacgatcccagtaaatccagttggatgaggtacatccgctgtgcg
aggcactgtggggagcagaacatgatggtggtccagtacaggtcgtgcatcttctacaga
gcctgcatggacatccccagaggaacggagctgctggtttggtacaacgactcctacacg
tccttcttcggcatcccgctgcagtgcatcgctcaggacgaaaacctaaacgttccagct
acagtggtggaggccatgagcagacaggaatccctccagtccttcagcaaaaacagcaag
ccatcctcgtcttcatcgtcctcctcctcccctccggccgccctgctgcgctccatggtc
ttcccccacgccccctgttcccggagcttctcgctgctggacaaggttggggtcggagtt
cagtcggactccggcttcggccagctgggctcgaagaaccagcgggttctggcgagcccg
acctccaccagccagctgagcagcgagttcagcgactggcatctgtggaagtgcggccag
tgcttcaagaccttcacccagaggatcctgctgcagatgcacgtctgtccgcagaacccc
gacaggccgtaccagtgtggccactgctcccagtccttctcgcagccgtcggagctgagg
aaccacgtggtgacgcactccagcgaccggcccttcaagtgcggatactgcggccgcgcc
ttcgccggcgccaccaccctcaacaaccacatccggacgcacaccggagagaagccgttc
aagtgtgagcgttgcgaccgcagcttcacgcaggcgacgcagctcagccgccaccagcga
ctccccaacgagtgcaaaccggtcaacgacagcaccgagtccatcgaggtggattaa
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