Xiphophorus hellerii (green swordtail): 116733575
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Entry
116733575 CDS
T07363
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03020
RNA polymerase
xhe04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116733575 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
116733575 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116733575 (polr3b)
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116733575 (polr3b)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116733575 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
116733575
NCBI-ProteinID:
XP_032440266
LinkDB
All DBs
Position
2:complement(14096940..14120330)
Genome browser
AA seq
968 aa
AA seq
DB search
MELLGGEFGDMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRFLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNAELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHRKLVNTFRLMRRAGFINEFVSISTNMTDRCVYISSDGGRLCRPYIIVKK
GQPMVNNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQISLYEHLISKETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNTKCILRR
YTNQTFDKVMGPMLDAATRKPIWRHNILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEEAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIEAACWEGGGPGRDGFTT
GRPLEAAK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgggaggagagtttggagacatgactcctcaggagctggcggctcctgtc
aacaccgtggcggaaaagtggaaattgctaccagccttcctgaaggtgaaaggtttggtg
aagcaacacatcgactcgttcaactacttcatcaatgttgagattaagaaaatcatgaaa
gcgaatgagaaaataaccagcgatgctgatccaatgtggtacctgaagtacctgaacatc
tacgttgggatgcctgatgtcgaggagagcttcaacgtaaccagaccggtttctcctcat
gagtgtcgcctcagagacatgacctactcggcaccgatcacggtggacatcgagtacact
cgcggcagccagaggatcatccgaaacgctcttccgattggaaggatgccaatcatgctg
cgaagctccaactgcgtcctcacgggaaagacgcctatggagttctctaagctcaacgag
tgtcctttggatccaggaggttatttcatcgtaaaaggccaggagaaagtcatcttgatt
caggagcagctgtccaagaatcggatcattgtggagcaagacaggaagggagcagttgga
gcctcagtcaccagctccactcatgagaagaaaagcagaaccaacatgattgtgaagcaa
ggccgcttctacctgagacacaacactctgtctgaagacgctcctatagccataatattc
aagggcatgggtgtagagagtgaccaggagatagttcagatgatcggcacagaggagcac
gtcatggccagcttcgctccgagcctggaggagtgtcagaaagctcagatcttcacacag
actcaggctctgaggtttcttgggaataaagtccggcggcaacggatgtggggaggcccc
aagaagaccaagatggaggaggccagagagctgctcgcctctctcatcctcactcatgtt
cctgtgaaagagtttaactttcgggctaaatgcatttacctggctgtgatggtccggagg
gtgatcctggctcaaggcgacaacaaagtggacgacagagattattatgggaacaagcgt
ctggagttggctggacagctgctgtctctgctgtttgaggatctgtttaaaaagtttaat
gccgaactgaagaagatcgccgaccagatcatccccaagcagcgagccgctcagtttgac
gtggtcaaacacatgaggcaggatcagatcaccaacggcatggtcaacgccatctccaca
gggaactggtctctgaagaggttcaagatggaccgtcagggtgtcacccaggttctgtcc
cgtctctcctacatttcggctctggggatgatgaccaggatctcctcccagttcgagaag
accaggaaggtcagcgggcctcgttctctgcagccgtcccagtggggaatgctgtgtccg
tccgacactcctgagggagaggcctgcggtctggtcaagaacctggctctgatgacacac
atcaccacagacatggaggacgggcccatcatcaaactggccttcaacctcggcgtggag
gacgtcaacctgctgtgcggagaggagctctcctacccgagcgtcttcctcgttttcctc
aacggtaacattctgggcgtcatcagagaccatcggaaactagtcaacaccttcagactg
atgcggagggcgggtttcatcaacgaattcgtgtccatctccaccaacatgaccgaccgc
tgcgtctacatctcgtctgacggaggacgactctgcagaccgtacatcattgtgaagaag
ggacagccgatggtaaataacaaacacatcgaggatctgtctcagggctacagaacgttt
gaggactttctgcatgaaggccttgtggagtacctggatgtgaacgaggagaacgactgt
cagatctccctttatgagcacctgatcagcaaagagacgacacacttggagatcgagccc
ttcacgttgctcggagtgtgtgcgggcctcattccctacccccaccacaaccagtcgccc
aggaacacataccagtgcgctatgggcaagcaggccatgggaactattggctacaaccag
aggaaccgcatcgatactctgatgtacctgctggcctatcctcagaggccaatggtcaaa
accaaaaccatcgagctgattgactttgagaagctgccggcgggtcagaatgccaccgtg
gccgtgatgagttacagcggctatgatatcgaggacgctctggtcctcaacaaagcctcg
ctggacagaggatttggtcgctgccttgtctacaaaaacacaaagtgcattctgaggcgt
tacaccaaccagacctttgacaaggtgatggggcccatgctggacgctgctacccgtaaa
ccaatatggaggcacaacatcctggacgctgacggcatctgttcccccggtgagagggtg
gagaacaagcaggtgctggtgaacaaatcaatgccaaccgtcactcagacgccactggag
ggcagcgcccagccaggtcagccacagtaccgagacgttcccatcagctataagggctca
acagactcgtacatcgagaaggtcatgatctcgtccaacgctgaagaagccttcctcatc
aagatcctcctgaggcagacgaggagaccagagataggagataaattcagcagtcgacac
gggcagaaaggtgtgtgtggcctcatcgtccctcaggaggacatgccgttctgtgacact
gggatctgtccagatatcatcatgaatccccacggatatccgtccagaatgacggttgga
aagttgatagaagctgcttgctgggaaggcgggggtcctggacgggacggtttcactacg
ggacggcctttggaggcagcaaagtga
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