Xiphophorus hellerii (green swordtail): 116734455
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Entry
116734455 CDS
T07363
Symbol
esr1
Name
(RefSeq) LOW QUALITY PROTEIN: estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116734455 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116734455 (esr1)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
116734455 (esr1)
Nuclear receptors [BR:
xhe03310
]
3. Estrogen like
3A. Estrogen receptor
116734455 (esr1)
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Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116734455
NCBI-ProteinID:
XP_032441769
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Position
15:6330189..6345543
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AA seq
639 aa
AA seq
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MYKRQNPVQSKQEFGPALRPRISPASSELETLSSTRLPPSPRAPLSDMYPEESRGSGGVA
AVDFLEGTYDYATPTPAPTPLYSHSTTGYFSAPLDAQGPPSDGSLHSLGSGPTSPLVFVP
TSPRLSPFMHAPSHHYLETASTPAYRSSHQPASREDQCDTRDEACSVGELGAGVGVGVGV
GAGAAAAAGGFEMPKETRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATN
QCTIDRNRRKSCQACRLRKCYEVGMMKGGVRKDRGRILQRDKRQMGVSDREKTGKGLEHK
ATHHHDKRRRSSALGGARSSVTSLPSDQVLLLLQGAEPPILCSRQKMNRPYTEVTMMTLL
TSMADKELVHMIAWAKKLPGFLQLSLHDQVLLLESSWLEVLMIGLIWRSIHCPGKLIFAQ
DLILDRNEGDCVEGMAEIFDMLLATSSRFRMLKLKPEEFVCLKAIILLNSGAFSFCTGTM
EPLHDSAAVQNILDTITDALIHHISQSGYSAQQQARRQAQLLLLLSHIRHMSNKGMEHLY
SMKCKNKVPLYDLLLEMLDAHRHHPVKPSQPSSPDDKAPPSTSGVCLGGSSPAGSVSGPR
DGSETLIRTPSAPSVLQYGGPAPTAPRSCELGGDSQFCE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaggcagaacccagtgcagagcaagcaggagttcggaccagcactcagaccc
aggataagcccagcctcctcagagctggagaccctctcctcgacacgtctcccaccctca
ccccgtgcccccctcagtgacatgtaccctgaagagagccggggctccggaggggtagct
gctgttgacttcctggaagggacgtacgactatgccacccccacccctgccccaacacct
ctttacagtcactctaccactggctacttctctgctcctctggacgcccagggaccaccg
tctgatggcagccttcactctctggggagtgggccgaccagtcctcttgtgtttgtgccc
accagcccgaggctcagcccctttatgcatgctccaagccaccactatctggaaactgct
tcaacaccagcttatagatccagtcatcagccggcctccagagaggaccagtgtgacacc
cgtgacgaggcatgcagtgtgggagagctgggagctggagtcggagttggagttggagtc
ggagccggcgccgcagccgcagccggggggtttgagatgcctaaagagacgcgtttctgt
gctgtgtgcagcgactatgcctccgggtaccactatggggtgtggtcctgtgagggctgc
aaggccttcttcaagaggagcattcagggtcacaatgactatatgtgcccagcgaccaat
cagtgtactatcgacaggaataggaggaagagctgccaggcttgccgactcaggaagtgt
tacgaagtgggtatgatgaaaggaggtgtgcgaaaagaccgtggtcgcattctgcagcgc
gacaaacgacagatgggcgtcagtgacagagaaaaaactggaaaaggtctggagcacaaa
gcgacacaccatcatgataagaggagacgcagcagtgccctgggaggagcgagatcctca
gtgaccagcctgccatctgaccaggttctgcttctccttcagggtgctgagcccccgatt
ctgtgctcccgtcagaagatgaaccgaccctatactgaggtcaccatgatgaccctgctg
accagtatggccgacaaggagctagtccacatgatcgcttgggcaaagaagctcccaggt
ttcctgcagctctccctccacgatcaggttctactgctggaaagttcatggctggaggtg
ctgatgatcggactcatttggaggtcaatccactgccctggaaaactcatctttgcacaa
gacctaatactggacaggaatgaaggcgactgtgttgaaggcatggcggagatcttcgac
atgctgctggccacctcttcccgcttccgcatgctcaaactcaaaccggaggaatttgtt
tgcctcaaagcgatcatcctgctcaactctggtgcgttttctttctgcactggaacaatg
gagcccctccacgacagcgcggccgtccagaatatcctggacaccatcacggatgcactc
atacatcacatcagccaatcaggatactcggctcagcagcaggcgagacggcaggcccag
ctgctcctgctgctctcccacatcagacacatgagcaacaaaggcatggagcacctctac
agcatgaaatgcaagaacaaagtgcctctgtacgatctgctgctggagatgctcgatgcc
caccgccaccacccggtcaaaccgtctcagccttcatctccagatgacaaagctcctccc
tccaccagtggtgtgtgtttgggcggctcctctccagccggttccgtttccggacctcga
gatggcagcgagaccctaatcagaaccccctcggctcccagcgtcctgcagtacggaggc
cccgctccgactgcacccaggtcctgtgagttggggggcgatagtcaattttgtgaatga
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