Xiphophorus hellerii (green swordtail): 116735267
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Entry
116735267 CDS
T07363
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04010
MAPK signaling pathway
xhe04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116735267
04020 Calcium signaling pathway
116735267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116735267
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116735267
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
116735267
NCBI-ProteinID:
XP_032442913
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All DBs
Position
16:17087858..17225190
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AA seq
2500 aa
AA seq
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MTDGEGRVRFQYEACQEQGEVQEDVRLSVSAGHRTDAPDHNGDPEGQRGGGGREEEQKQQ
EEEKEEAVEKKRRGSCGGRGERRDEWSVEVQECEEEQEPELEMEAGPTLGVRITAPIRDP
DCVSEEEEQQPYPALAPVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMF
QPCEDVNCQSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVM
AGVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFV
FFIFGIVGVQLWAGLLRNRCFLGEDIISLYNQSIHSYYMSEEGEDSPFICSAPRENGMLR
CRDVPPFTQGGEDCSLPAPHQSSALIGSPPGVGGSSNSNCVNWNQYYNVCRPGEHNPHKG
AVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVV
IATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFRRRLQR
MYYGWHSKRRKKVNPNGSGIGSNSGGNGHGQGSSRGSGPGTALWLRPIHNLLQHHQHQHC
HLSNGGQHTVNATVAEHMDQEGHAEGVEVLEMKTLSVPRGSTNGSGGENPAVVSQGMGAL
LGRLNGGMNYPTILPSFVCSYSSKTPPPHSKHVCPEQHPMNHPASEHTEPLNKLYQLMGQ
HSCQRLLIQLAGVVPSPLLLELLSCPLCARSLETLELELGDLEGGKGEADGIRDFQQGGD
LRGFRSLFRRRGVVACRNGAVQAWINFREKLRRIVESKYFNRGIMIAILVNTLSMGIEYH
EQPDELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQ
ADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMH
LFGCKFSQRMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYF
VALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFDEDDKVEQLRDTELKMY
SLMMTANGHIDPRGTMAPPIIMHTAATPMPTPKSSLGPESILEEELMYREAQHGEAGLGV
SETGSGRAESRRGSSASMDPAAYDQHSLTLSSPGRHSPLPLRGSISSWGSRRSSWNSLGR
APSLKRRDTSGERESLLSGEGGEEEECQEQQEEAGVNSRVKLESLEPLQASSLCPTIIAE
YGDCNGRTVTYDPNGNSDPKVDFTSDDDLDEDSPFCCWVRRELHNMKPRWCKEHESWTLY
LFAPESPVRVWCQAVITHKLFDHVVLVFIFLNCITIALERPDILPHSPERVFLSVSNYIF
TVIFLAEMAIKVVALGFCFGNQTYLQSSWNVLDGVLVFVSLVDILVSLAYTGTNRILGIL
RVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGK
FYHCEGLDTKNVTNRSDCELANYKWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLD
AVGLNQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREE
KRLKMIDKKRRSKENGGAEAKQRPYFADYSPLRLTIHTLCTSHYLDLFITFIICINVFTM
SIEHYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGFHRFFKDRWNQLDVGIVALSIL
GITLEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNLGL
LFMLLFFIYAALGVELFGKLECSDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIM
KDTLRDCQPDEVHCLSYLPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDA
EMDAEIALEMEVERQRRQSTGSNNSVGGTYIGPCPNSPEEEEEQQYNDQNLLSSGKMSVS
RMHSLPNDSYMFQPVRPASSPYPTKEVDASSQHQHAVSVMSIQSQPCESRSLLQVPDASP
LHPQSTPTLTLPRIAPPTPGPSPRALHRQGAVKVDSVEFQSCEQQERSNSAHLPPQSPSS
LSPLPPFPPSPSALSFHPCTPSPSSLPPSPSSLLPLPSPPSFLLPPPPSPRLPSRSSSLR
RPRAPSAISLSDPADAEVYHITSSACHRWRNAEGGEQENRRKAGRSHSLSPYASPHSLDL
IPTLPPPSNRSTLSLHGAGSKDVKKGFSVDHHGFLEKPQLELAGHSDDQRRHSIEVCLPQ
AVITTDSQNFMLETHRSEKGAQSFPMRVQSVGGRQRKKKTSPPCISIHPPPEREHRLLPS
PPKLADCSMTLRRRTSSNDFTQHSQDTPAETQLRAHMQTPLTPIPAPLRPHSPTHTLTPS
QGSTPTHAQAHTPSPAHIPISPNIFIQPHAPLLPTVMPFSQTVSRHSPLAGDCIPLPRFT
FDQPQSRYVGEPESVACSSPFDNRLGSSPGFSAKNRRTAQ
NT seq
7503 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaagggagagtgcgctttcagtacgaagcgtgccaggagcagggcgag
gtacaggaggacgtgaggctttctgtatcggcgggccacaggaccgacgccccagatcac
aatggtgacccagaaggacaaagaggaggaggaggccgggaagaggagcagaagcagcag
gaggaagagaaggaggaggcggtggagaagaagaggagagggagctgtggcggtcgagga
gaaaggagagacgagtggagcgtcgaagttcaggaatgtgaggaggagcaggagccagag
ctggaaatggaagctgggcctacgctgggagtccgcatcacagctccaatccgcgaccca
gactgcgtgtccgaggaggaggagcagcagccgtatccggccctggctcctgtggccttc
ttctgcctgaagcaaacaacaaggccccgcaactggtgtcttcgcatggtctgtaacccg
tggttcgagcacgtgtccatgctggtgatcctgttaaactgtgtgactctggggatgttt
cagccctgcgaggatgttaactgccagtcagagtggtgccgcatcctacaggtgttggac
gattgcatctttgctttctttgcggtggagatggtcatcaagatggtggcccttggaatt
tttggccccaattgttacctcggcgacaagtggaaccagctcgactttgttattgtcatg
gcaggggtgatggagtattctctggatggccacaatgccagtctgtcagccatccgtact
gttcgagtgctcaggccactgcgggcgatcaacagagtaccaagtatgaggatcttggtg
acgctgcttctggacaccttacccatgctgggaaatgtgctccttctctgcttctttgtc
ttttttatcttcggcattgtgggagtccagctgtgggccggactgctgcgtaaccgctgc
ttcctgggagaagacataatatcactttacaaccagtccattcattcttactacatgtct
gaggaaggtgaagacagcccgttcatctgctcagctccccgagagaacgggatgctgcgc
tgccgtgacgtgccgcccttcacccagggaggagaggattgctcacttcctgctccccac
caaagttctgctctgattggttcaccacctggagtgggcgggtcaagcaatagcaactgt
gttaactggaaccagtattacaacgtctgccgccccggggaacacaacccccacaaggga
gcagttaactttgacaacattggctacgcttggatagccatattccaggtcatcacactg
gaaggatgggtggacatcatgtattatgtcatggatgcccactccttctacaattttata
tattttatactgctcattattgtgggctctttcttcatgatcaatttgtgcctcgtggtc
atcgccacccagttttctgagacaaagcaaagagaaaatgccctgatgagggagcagcgt
gctcgctacatgtcgaatgactcaactctggccagttacagtgagccaggctcgtgctat
gaggagatgctacgatatattagtcatctatacaggaagttcaggcgcaggctgcagaga
atgtactatggatggcacagcaaacgacgcaaaaaggtgaaccctaacggcagtgggatt
ggcagcaacagtggtggaaatggacatggccaaggttccagcaggggatcaggacctggc
actgcactgtggctgaggccaattcataacctcctgcagcaccatcagcaccaacactgt
cacctcagcaacggtgggcagcacacagtgaatgctacagttgctgagcacatggaccag
gaaggccacgctgaaggagtggaagtcctggagatgaagaccctttctgttccgagggga
agtacaaacggaagcggcggcgagaatcctgccgtcgtctctcagggaatgggagcactg
ctcgggcgactgaatgggggcatgaattatcccaccattctgccatcttttgtgtgcagc
tacagcagtaaaacaccacctccccactcgaagcatgtgtgtccggagcaacacccaatg
aaccacccggcgtctgagcacacagagccgttgaacaagctttaccagctcatggggcag
cacagttgccaaaggctgttgatccaactggcaggcgtcgtgcccagccctctgcttttg
gagctacttagctgccctctgtgtgcccgcagccttgagaccctggaactggaactagga
gacctggaggggggcaaaggagaggctgatggaatccgtgactttcagcaggggggagat
ctacgaggattcagaagtctgttccgacgccggggggttgttgcgtgcagaaacggagct
gtccaggcctggataaacttcagggaaaaattgagaagaatagtggaaagtaaatacttc
aaccgggggattatgatcgccatcctcgtcaataccctcagcatgggaatagagtaccat
gaacaacccgatgaattgactgatgtgttggagattagcaacattgttttcaccagcatg
tttgtgctggagatgggcttcatgctgctggcttttgggttgtttggatacatcagaaac
ccttacaacatctttgacagcatcattgtcatcataagtgtgtgggagataataggtcaa
gcggatggagggttgtcggtcctgcggacatttcgcctgctgcgagtcctgaagctcgta
cggtttctacctgccctgaggaggcagctggtggtgctgatgaagaccatggacaatgtg
gccaccttctgcatgctgctgatgctttttatcttcactttcagtatacttggcatgcat
ctgttcggatgtaaattcagtcaaagaatggagaacggagacaccattcctgatcgcaaa
aactttgactcgcttctctgggccattgttactgtattccagatccttacccaggaggac
tggaacgtggtgctgtacaacggcatggcttctacctctccatgggcggctctctacttt
gttgctctcatgacgtttggcaattatgtgctcttcaatttattggtcgccatcttggtc
gaaggcttccaggctgagggtgatgccaatcgatcagagtcagacgatgaaaagaaatct
gacaattttgatgaggacgacaaagttgaacaacttagagacacagagcttaagatgtac
tctctgatgatgacagccaatggtcacattgaccctcgtggcactatggctcctcccata
ataatgcacacagctgccactcccatgccaacgccaaagagctccctagggcctgagtcc
atcttagaggaagagctcatgtacagagaagctcaacatggagaagctggactgggtgtt
tcagagacagggagtggccgcgcggagtctcggcgtggaagctcagcatccatggaccca
gcagcctatgaccagcattctttaactctctcaagccctggacgacactcacctctccct
ctccgtggttccatcagctcatggggaagtcgccgctccagctggaacagtctagggaga
gcaccgagcctcaaaaggcgagacaccagcggagagagggaaagtttactgtctggagaa
ggcggtgaggaggaagagtgccaagaacaacaagaggaagctggggtaaacagcagagta
aagctggagtccttggaaccgctgcaggcatcttctctctgccctaccattatagcagag
tatggcgactgcaatgggaggaccgtcacatatgacccaaatggaaactcggaccccaaa
gttgacttcacatcagatgatgacttagatgaagatagtcctttctgctgctgggtcagg
agggaactccacaacatgaagccccgctggtgtaaggaacacgagagctggacgctctat
ttgtttgcaccggagagcccagtccgtgtgtggtgccaagctgtgatcactcacaaattg
ttcgaccatgtggttctggttttcatcttcctcaactgcatcactatcgctctggagagg
cctgatatacttcctcacagcccggagcgagtatttctaagtgtgtccaactatattttc
actgtgatcttcctagcagagatggccatcaaggttgttgctcttggtttctgctttggg
aatcaaacctaccttcagtccagttggaacgttttggatggagtgttggtctttgtgtct
ctggtggacattctagtttctctggcctataccggcaccaacaggatcctggggattctc
agagtccttcgtcttctacgcacccttcgccctctgagggtgatcagtcgcgccccagga
ctgaagctggtcgtggagacactcatcacctctctaagacctattgggaacattgtattg
atctgctgcgccttcttcattgtgtttggaatcttgggggtccagctgttcaaagggaaa
ttttaccactgtgagggtctggacacaaaaaacgtcacaaacaggtccgactgtgaactc
gccaactacaagtggatacgaaggaagtacaattttgacaacttgattcaggctttgatg
tctctgtttgtgctgtcgtgtaaggatggttgggtcaacatcatgtatgatggactagat
gcagtcggattgaatcaacagcccgtgaggaaccacaacccctggatgctgctctacttc
atctccttcctgctcatcgtcagcttcttcgtcctcaacatgttcgtcggtgtcgtggtg
gaaaacttccacaagtgccggcaggaccaggaggaggaggaggcccgtttacgggaggag
aagaggctcaaaatgatagataaaaagcgcaggagtaaggagaatggaggggctgaggcc
aagcagagaccgtacttcgccgactactctcctctgcgcttgaccatccacactctgtgc
acaagccactacctggatctcttcatcaccttcatcatttgtatcaatgtcttcacaatg
agcatcgagcactacaatcagccacagtatttggaggaggttctgaagtactgcaactac
gtgttcaccattatctttgtcatcgaggctctgctcaaacttgtggcctttggcttccat
cggttcttcaaagacaggtggaatcagctggatgttggaatagttgccttgtccattctg
ggaatcactctggaagagctgaaaatgaaagctgctttgccaataaatcctaccatcatc
cgaatcatgagagtactgcgcattgcacgagtcctaaaacttctgaagatggcaaaggga
atgagagctctcctcgatactgtcatgcaagctctgccccaggtgggaaatcttggtctc
ctcttcatgttgctcttcttcatctatgctgccctgggagtggaactcttcggcaaactg
gaatgcagcgacagcaacccgtgtgaggggctgagccgtcacgcaacatttgagaatttt
gggatggccttcctcacactgtttcgagtttccacgggagacaactggaatgggattatg
aaagacactttaagggattgccagccagacgaagtccactgtttgtcttacctaccctgg
gtgtctccaatttactttgtcaccttcgtgctcatggcccagtttgttttggtcaatgtg
gtggtggctgttttaatgaaacacctggaggagagcaacaaggaggccaaagaggatgca
gagatggatgcagaaattgcactggaaatggaagtggagaggcaacgcagacaaagcacc
ggatccaacaactcagtgggaggaacttatattgggccatgcccgaattcacctgaagag
gaggaagaacagcagtacaatgaccagaacctgctgtcttcaggcaagatgtccgtatcc
aggatgcactctctgccaaatgacagctacatgtttcaacctgtacgacctgctagctcc
ccctaccctacaaaggaggtagatgctagttcccagcaccagcatgcggtctcagtgatg
tcgatccaatcccagccctgcgagagccgctctctgctgcaggttccagacgcttcccct
cttcatccccagtcgactcccaccctcactttgccccgcattgccccaccaacacctggc
ccctcaccacgggccctgcacagacagggggcagttaaagttgattctgtggagttccaa
agctgtgagcaacaagagaggtccaattcagcccatctgcctccccaatccccatcgtca
ctctccccgctgcctccttttcccccttctccctctgccctctccttccacccatgcacg
ccatctccctcctctcttcctccgtcaccatcttccctcctgcctctcccgtctcctccg
tcttttctcctgcctccacctccctcaccgcgtctgccctctcgctccagcagcctccgc
aggcccagggctccgtccgccatttccctctcggacccggccgacgcagaggtgtatcac
attaccagctcggcttgccacaggtggaggaatgcagaaggaggggaacaagaaaacaga
cgcaaggcagggcgcagccactcgctgtccccttacgcctcgccgcactccctcgatttg
atccccacgctgcctcctccgtccaacaggagcacccttagtctgcacggggcaggatca
aaggacgtcaagaaaggcttcagtgtcgaccaccacggcttcctggagaagcctcaatta
gaactggcgggtcactcggatgaccagcggcgccactcgattgaggtctgccttccgcag
gccgtcataaccaccgacagccaaaactttatgctggagacccatcgatcggaaaagggc
gctcagtcctttcccatgagggtgcaatcagtcggcggcaggcagagaaagaagaagacg
agccctccctgcatctccatccacccgcccccagagagggaacatcgcctgcttccctcg
cccccgaaactggccgactgcagcatgacgctgagacgcaggacatcttctaacgacttc
acacagcactcgcaagacacacccgcagaaacacagctccgtgcacacatgcagacacct
ctaacaccgatccccgcgccgctgcggccacattcgccaacacacacactgaccccgtcg
cagggatccaccccgactcacgcccaggcgcacactccatctcctgctcacattcccatc
agcccaaacatcttcatccagccccacgcgcccctcctcccaaccgttatgcctttctca
cagacggtctcgaggcactccccactcgcaggagactgcatccctctcccccgattcacc
ttcgaccaaccgcagtccaggtacgtgggcgagcccgaatccgtcgcctgctcttcccct
tttgacaaccgactgggaagcagtccaggtttcagcgcaaagaatcggaggaccgcccag
tga
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