Xiphophorus hellerii (green swordtail): 116736174
Help
Entry
116736174 CDS
T07363
Name
(RefSeq) sphingosine kinase 1-like
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00600
Sphingolipid metabolism
xhe01100
Metabolic pathways
xhe04020
Calcium signaling pathway
xhe04148
Efferocytosis
xhe04370
VEGF signaling pathway
xhe04371
Apelin signaling pathway
Module
xhe_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116736174
09130 Environmental Information Processing
09132 Signal transduction
04370 VEGF signaling pathway
116736174
04371 Apelin signaling pathway
116736174
04020 Calcium signaling pathway
116736174
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116736174
Enzymes [BR:
xhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
116736174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
Motif
Other DBs
NCBI-GeneID:
116736174
NCBI-ProteinID:
XP_032444377
LinkDB
All DBs
Position
16:16926509..16944775
Genome browser
AA seq
564 aa
AA seq
DB search
MEKDASAPDPSRQCNGFSGVLYGEFTDTLNDGVRYSVSLTESALTIQRISSSPDRTKVVF
NLSDCIGCRAYKGPDSADIGAYFAAYFYPFKRRWMSTGVARQRVEQCFRVALVQDPLVNL
REAERWAHAIRDASVLQAPRRDGVMYTELRRPCRTMILVNPHSGRGQALQLFTGHIQAML
TEASVPYTLVITEHQNHARELVRNADLTQWDALVIMSGDGLLFEVINGLMEREDWQQAIQ
TPLGMLPGGSGNALAASIHHYSQSPPAWNEELLLSCGFMLCKGLVGSLDLVSVHLASSQR
LFSFLSLAWGFVADVDIESEKYRHVGAIRFLMGTLVRLASLRVYQGRLAYLPAKEIPKPP
NERAKATRPPFTPQQPSLCSSLPCHLVPKASPNQSSLKNCVDTNLNQNSITNSSNVITNM
RPETHGNNKTTSPTDSLLPSLCQPVPENWTVVNEEDFVLVLAICHSHLAEDLWTVPGAMA
DDGLIHLFYVTAGISRPALLRLFLAMERGSHLAYGCPHLVYEKVRALRLEPISQQGMITV
DGEVVEYGPIQAQVHPRMARLICG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagacgcctcagcgccggacccatcccggcagtgcaacgggttctcgggcgtg
ctgtacggagagttcaccgacactctcaacgacggggtgcgctactcggtgagcctgacg
gagagcgccctgaccatccagaggatctcctcgtctcccgaccggacgaaggtggtgttt
aacttgagcgactgcatcggctgtcgggcgtataaagggccggacagcgcggacatcggc
gcttacttcgcggcttatttctacccgttcaagaggcgctggatgagcaccggagtggcc
cggcagagggtggagcagtgctttcgggtcgctctggtgcaggacccgctcgtcaacctc
cgggaggctgaaagatgggctcatgccatcagagatgcctcagtgctgcaggctcctcgg
agagacggtgtgatgtacacggagctgaggagaccttgcagaaccatgatcctggtgaac
ccccacagtggacggggacaggctctccagctgttcactggccacatacaggccatgctc
actgaggcctccgttccctacacgctcgtcatcacagagcaccagaaccacgcgcgggag
ctggtgaggaacgccgacctgacgcagtgggacgcgctggttatcatgtctggtgacggg
ctgctgtttgaggtgataaatggtctgatggagcgggaagactggcaacaggccatccag
actcctctagggatgctaccaggtggctctggcaatgccctggccgcatccatccaccac
tactcgcaatcacctcctgcctggaatgaggagctgctcctgagctgtggcttcatgctg
tgcaaaggtctggttggttctcttgacttggtgtcggtccatttggcctccagtcagcgc
ctcttctccttcctctctttggcttggggctttgtggcagatgtggatatcgagagcgag
aagtaccgtcatgttggggctatccgcttcctaatgggcaccctggtgcgtctggcctcg
ctcagagtatatcagggcaggttagcatacctgccagctaaagagataccaaaacctcca
aacgaaagggcgaaggcaacccgtcctcctttcacacctcagcagccatctctctgttcg
tcccttccttgtcatctcgttcccaaagcttcaccaaatcagagctctctgaaaaactgc
gtcgatacgaacctgaaccaaaactccatcaccaactcctccaacgtcatcactaatatg
aggcccgagacgcatggcaacaataagactacgtcacctacagattctctcctccccagc
ctgtgccagccggtccctgaaaactggacggtggtcaatgaggaagactttgttcttgtg
ctggctatttgccattcccacctagcggaggatctgtggacagtgccaggagcgatggcg
gatgacgggctgattcatctgttttacgtgacggcgggaatatcccggcccgccctcttg
cgtcttttcctcgccatggagaggggttcccatttagcgtacggttgtccccaccttgtg
tacgaaaaggtgagggccctgcggttagagcccatctcacaacagggcatgatcaccgtg
gacggagaggtggtggaatacggccccatccaggctcaggtccaccccagaatggctagg
cttatatgcggatga
DBGET
integrated database retrieval system