Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00118
Help
Entry
AMD24_00118 CDS
T04108
Symbol
pdhB
Name
(GenBank) Pyruvate dehydrogenase E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00010
Glycolysis / Gluconeogenesis
xii00020
Citrate cycle (TCA cycle)
xii00620
Pyruvate metabolism
xii00785
Lipoic acid metabolism
xii01100
Metabolic pathways
xii01110
Biosynthesis of secondary metabolites
xii01120
Microbial metabolism in diverse environments
xii01200
Carbon metabolism
xii01210
2-Oxocarboxylic acid metabolism
Module
xii_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
AMD24_00118 (pdhB)
00020 Citrate cycle (TCA cycle)
AMD24_00118 (pdhB)
00620 Pyruvate metabolism
AMD24_00118 (pdhB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AMD24_00118 (pdhB)
Enzymes [BR:
xii01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
AMD24_00118 (pdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ALJ56313
UniProt:
A0A0P0G719
LinkDB
All DBs
Position
127129..128103
Genome browser
AA seq
324 aa
AA seq
DB search
MPLITYRKALNNALAEELLRDENVVIVGEEVAEYDGAYKVTEGLWRRFGSRRVVDTPISE
AGFIGLGIGASMLGIRPVIELMFWSFAYVAFDQIINNAGCIRYMSGGLIHLPLVIRGPAN
GGTNVGATHSHTPENFIANTPGLKVVCPATAYDAKGLMKAAIRDNDPVCVMENTLLYGES
WDVPEEEYLIPLGVADIKRRGTDVALIAHGRAVLTALKAADILARQHCIHAEVVDLRSIR
PLDEEAVLNSIRKTHRAVLVDENRPFCAVSSQIATLIQEKAFDELDAPVVRVCTLDAPAI
YSPELERGQLPTAERVVNKTLSIC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgattacctaccgcaaagctcttaataacgcacttgctgaagaacttttgcgt
gatgagaatgtagtaattgttggtgaggaggttgctgaatacgacggagcttataaagtt
accgagggtttgtggagacgttttggaagcaggcgtgtggtggatactcccatcagtgag
gctggatttatcgggctaggaataggggcctctatgctaggaatacgcccagtgattgag
ctcatgttttggagttttgcctacgtggcctttgaccaaatcattaacaacgcaggatgt
attcggtatatgtcaggaggtcttattcaccttccactcgttatccgtggccctgcgaat
ggtggaacgaatgtaggggctactcactcacacactccggaaaatttcatcgctaatact
ccgggcttaaaggtggtttgtccagcaacagcctatgatgcaaaagggctaatgaaggct
gctattcgcgataatgacccggtctgtgtaatggaaaataccctactttatggagaaagc
tgggatgtccctgaagaagagtatcttattcctctaggcgtagcagatattaagcgcaga
ggaacagatgttgcactcatcgcccacggtcgggctgtacttactgctctaaaagctgct
gatatcctggcgaggcagcactgcatccacgcagaagtcgtcgatctgcgctccattcgg
ccactggatgaagaggcggtcctgaattctattcgtaagactcaccgggctgtcttagtc
gatgagaatagacccttctgcgcagtgtcttcccagatcgctaccctcattcaggagaaa
gccttcgatgaattggatgcccctgtggttcgcgtctgcaccttagatgctccggcaatc
tatagccctgagcttgagagagggcagcttcccactgcggaacgggtggtcaataaaact
ctttctatttgctaa
DBGET
integrated database retrieval system
