Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00664
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Entry
AMD24_00664 CDS
T04108
Name
(GenBank) hypothetical protein
KO
K09949
UDP-2,3-diacylglucosamine hydrolase [EC:
3.6.1.54
]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Pathway
xii00540
Lipopolysaccharide biosynthesis
xii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AMD24_00664
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xii01005
]
AMD24_00664
Enzymes [BR:
xii01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.54 UDP-2,3-diacylglucosamine diphosphatase
AMD24_00664
Lipopolysaccharide biosynthesis proteins [BR:
xii01005
]
Lipid A
AMD24_00664
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxI_C
LpxI_N
Motif
Other DBs
NCBI-ProteinID:
ALJ56829
UniProt:
A0A0P0GIK9
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All DBs
Position
complement(703525..704343)
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AA seq
272 aa
AA seq
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MYPPENLLLIAGSGKYPLLVVHSARAAGVRRIILVAFEGETSPELSRWVDEIYTVRVGRL
SHLLSVARKSGACYAMAVGQIAPKNLFDLHLDMRALLLLARLRKRNAETLFGAVADELSH
IGVELLPATTFLNNYLADEGLLAGPKIKLPVMEDLRFGYQIAKEISRLDIGQTVVVRKGT
VLAVEAFEGTNASILRGGKLGIENATIVKVAKPNQDMRFDVPAIGLTTLECASSVRIRSI
GIEAHCTLLLEKDRLIEYADLHSLSIYGLKAS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtatccacctgaaaatttactcctgattgctggaagtggcaaatacccactcctcgtg
gttcattctgctcgtgcagccggtgtgagacgtattatcctagtcgcctttgaaggagaa
acctctccagaacttagtagatgggttgatgaaatttataccgtacgagttggacgactc
agccatctcctttctgttgcaaggaagtctggcgcatgctatgcgatggctgttggacag
attgctccaaaaaacctttttgatttacatctagacatgcgagctctccttcttcttgct
cgcctccgcaagaggaacgctgaaactctatttggagcagtagcggacgagttatctcat
ataggcgttgagctacttcctgccactacctttctgaacaactatcttgccgatgagggc
cttctggccggtcccaaaattaagcttcctgtaatggaagatcttcggtttggttatcaa
attgctaaggagatcagccggctggatattggtcaaacagtagttgtccgtaaagggaca
gtacttgctgtggaggcattcgagggaacaaatgcctccattctccgaggaggcaagcta
ggaatagaaaatgctactattgtcaaagtggctaagccgaaccaggatatgcgattcgac
gtgcctgctattggtctgactacgctagaatgtgcaagtagcgtgcgaatccgatctata
ggtatagaggcccattgcacactcctgttagaaaaggacagattgattgaatatgccgat
ctccactctctgtctatctatggattaaaagcttcatga
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