Xenopus laevis (African clawed frog): 100049104
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Entry
100049104 CDS
T01010
Symbol
ggps1.L, ggps1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1 L homeolog
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00900
Terpenoid backbone biosynthesis
xla01100
Metabolic pathways
Module
xla_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
100049104 (ggps1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xla01006
]
100049104 (ggps1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
100049104 (ggps1.L)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
100049104 (ggps1.L)
2.5.1.29 geranylgeranyl diphosphate synthase
100049104 (ggps1.L)
Prenyltransferases [BR:
xla01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
100049104 (ggps1.L)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Phage_TAC_7
Motif
Other DBs
NCBI-GeneID:
100049104
NCBI-ProteinID:
NP_001091413
Xenbase:
XB-GENE-944152
UniProt:
A3KNC6
A0A974CUJ1
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All DBs
Position
5L:58534339..58572936
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AA seq
296 aa
AA seq
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MANSKEVSERILLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLL
ELHRGQGLDIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAVGLMQLFSSNDKDLKPLLNTL
GLFFQIRDDYANLNSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDIKTYCVHYLEKVGSFEYTRVTLRELEAEAYKQIESLGGNPQLVSLIEQLSEMYQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcaaaagaggtatctgaaagaattttgctggaaccttacaagtatgtactg
cagcttccaggtaagcagataagaacaaaactttctcaagccttcaaccactggttaaat
gttccagacgataaaatacaggttatcattgaggtgacggaaatgcttcacaatgcaagt
ttacttattgatgacattgaagataactcaaaacttcgtcggggctttccagttgctcac
agtatatatggcatcccatctgtaataaattctgctaactatgtatatttccttggtttg
gagaaagtcttaactatgaatcatccaaatgctgtacatgttttcacgcagcagttactt
gaacttcacagaggccagggactggatatttattggagagacacttacacttgccccagt
gaagcagagtacaaggctatggtactgcaaaagacaggaggactatttggattagcagta
ggacttatgcagttgttttcatccaatgataaagacttaaagccacttcttaatacactt
ggtttattttttcaaattagagatgattatgccaatttaaactctaaggagtatagtgaa
aataaaagcttttgtgaagacctaacagaaggaaagttttcatttcccaccatacatgct
atttggtcacgacctgaaagtactcaagtccaaaatatacttcgacaaaggacagagaat
gtagacatcaaaacatattgtgttcattatttagagaaggttggctcttttgaatacaca
agagtaactctacgagaattagaagctgaagcatataaacaaatagaatcactaggtgga
aaccctcagctggtatcattaattgaacaacttagtgaaatgtatcagtga
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