KEGG   Xenopus laevis (African clawed frog): 100049104
Entry
100049104         CDS       T01010                                 
Symbol
ggps1.L, ggps1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1 L homeolog
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla00900  Terpenoid backbone biosynthesis
xla01100  Metabolic pathways
Module
xla_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:xla00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    100049104 (ggps1.L)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:xla01006]
    100049104 (ggps1.L)
Enzymes [BR:xla01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     100049104 (ggps1.L)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     100049104 (ggps1.L)
    2.5.1.29  geranylgeranyl diphosphate synthase
     100049104 (ggps1.L)
Prenyltransferases [BR:xla01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   100049104 (ggps1.L)
SSDB
Motif
Pfam: polyprenyl_synt Phage_TAC_7
Other DBs
NCBI-GeneID: 100049104
NCBI-ProteinID: NP_001091413
Xenbase: XB-GENE-944152
UniProt: A3KNC6 A0A974CUJ1
LinkDB
Position
5L:58534339..58572936
AA seq 296 aa
MANSKEVSERILLEPYKYVLQLPGKQIRTKLSQAFNHWLNVPDDKIQVIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTMNHPNAVHVFTQQLL
ELHRGQGLDIYWRDTYTCPSEAEYKAMVLQKTGGLFGLAVGLMQLFSSNDKDLKPLLNTL
GLFFQIRDDYANLNSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDIKTYCVHYLEKVGSFEYTRVTLRELEAEAYKQIESLGGNPQLVSLIEQLSEMYQ
NT seq 891 nt   +upstreamnt  +downstreamnt
atggcaaattcaaaagaggtatctgaaagaattttgctggaaccttacaagtatgtactg
cagcttccaggtaagcagataagaacaaaactttctcaagccttcaaccactggttaaat
gttccagacgataaaatacaggttatcattgaggtgacggaaatgcttcacaatgcaagt
ttacttattgatgacattgaagataactcaaaacttcgtcggggctttccagttgctcac
agtatatatggcatcccatctgtaataaattctgctaactatgtatatttccttggtttg
gagaaagtcttaactatgaatcatccaaatgctgtacatgttttcacgcagcagttactt
gaacttcacagaggccagggactggatatttattggagagacacttacacttgccccagt
gaagcagagtacaaggctatggtactgcaaaagacaggaggactatttggattagcagta
ggacttatgcagttgttttcatccaatgataaagacttaaagccacttcttaatacactt
ggtttattttttcaaattagagatgattatgccaatttaaactctaaggagtatagtgaa
aataaaagcttttgtgaagacctaacagaaggaaagttttcatttcccaccatacatgct
atttggtcacgacctgaaagtactcaagtccaaaatatacttcgacaaaggacagagaat
gtagacatcaaaacatattgtgttcattatttagagaaggttggctcttttgaatacaca
agagtaactctacgagaattagaagctgaagcatataaacaaatagaatcactaggtgga
aaccctcagctggtatcattaattgaacaacttagtgaaatgtatcagtga

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