Xenopus laevis (African clawed frog): 100127346
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Entry
100127346 CDS
T01010
Symbol
grin2a.L, GluN2A, grin2a, NMDAR2A, nr2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A precursor
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04020
Calcium signaling pathway
xla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100127346 (grin2a.L)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100127346 (grin2a.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100127346 (grin2a.L)
Ion channels [BR:
xla04040
]
Ligand-gated channels
Glutamate (ionotropic)
100127346 (grin2a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
100127346
NCBI-ProteinID:
NP_001106367
Xenbase:
XB-GENE-1021446
UniProt:
B7ZSK1
Structure
PDB
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All DBs
Position
9_10L:complement(98550910..98811633)
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AA seq
1451 aa
AA seq
DB search
MGMFVLLLYTFLYAGDLGHGAEKSFPVLNIAVILGRTRYITERDIRSLWTRDMSLDFDVN
VVTLLVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAIAQILDFVSSQTFIPILGIH
GGSSMIMADKDEMSTFFQFGASIKQQATVMLNIMEEYDWHVFSVITSNFPGYRDFISFIK
TTVDNSFVGWEVQNYITLDTSYTDAQTLTQLKKIHSSVILLYCSKDEATYIFEEARSLGL
MGYGFVWIVPSLVTGNTDMIPYEFPSGLVSVSYDDWDYGIEARVRDGLGIITTAASAMLE
KHSVIPEAKTSCYGQNERNDPPLHTLHNFMINVTWDGKDLSFTEDGYQANPKLVVLLLNM
EREWEKVGKWENKSLNMKYPVWPRITASLDSDHDDNHLSIVTLEEAPFVIVENIDYLTGT
CVRNTVPCRKYFRLNNSTTEGTSVKKCCKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKK
IKNVWNGMIGEVVYKRAVMAVGSLTINEERSVAVDFSVPFVETGISVMVSRSNGTVSPSA
FLEPFSASVWVMMFVMLLLVSAMAVFIFEYFSPVGYNRNLAQGKDPHGPSFTIGKAVWLL
WGLVFNNSVPVQNPKGTTSKIIVSIWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDN
KFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHQYMVKFHQKGVQDALVSLKTGKLDAF
IYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKVSRWKRPIDLALLQFVGDGEM
EELEKLWLTGICHTEKNEVMSSQLDIDNMAGVFYMLAAAMALSLITFVWEHLFYWKLRFC
FTGVCTGTPGLLFSISRGIYSCIHGVHIEEKKKSPDFSFTASQTNMLKLLRASKNIANLS
NLNQSQCNSPKRTSDYIQRNSLLTDMVLDKGNLTYSDNRPFQQKDIYSENTYDLAMLSAN
CPKDSLNNYVFQGQHPLTLNESNPNTVEVAVSAEAKVNTRPRQLWKKSVETLRQTQGSVN
ENGTEESKSSIKNQRFLPEDGHFSDVSEASSRATCHIDSENNNKHRKSKDNLKKRPVSAK
YARECSEVELSYLKIKHGPNRDKVYTIDGDKEPSFIMDQPKYSENSPDQDDEDYPDVYQD
HNDNYRKTEPLQSDRTPLHSEGRLPNNDIQYKLFSKHYNLKEKNTSMSDANDRHRQNSTH
CRSCLSNMPNYTGHYTARSPYKCDDCLHTGKLYDIDEDQMLHEAANSMHSEDFYEHNWLE
NNALHFQKKNKLRINRQHSCDNINKPREHDLGRPPRSLSLKEKERYIQENPFAKFVIVPP
EKLLGNNASLFTDSLKDSKRSKSLYPDNSSDNPFLHSYQETQKLSHGRSSSDIYKQSSLP
KARNDNYLRSSIKSTTSYSSRDGRVPDDMCVSEYALPYVTSNNSVYSAPRGVNSCSNRRV
FKKMPSLESDV
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggggatgtttgttttactgctatacaccttcctgtacgcaggggacctgggccatgga
gcagagaaaagtttccctgttttaaatattgcagtcattttgggaaggactcgctacatc
actgagagggacatacgctctctatggacaagggatatgtccttggactttgacgtcaac
gtggtgaccttgcttgtgaaccaaactgaccccaaaagcatcatcacccatgtgtgtgac
ctcatgtcaggcaccaagattcatggggtggtgtttggagatgataccgaccaagaggca
atagctcagattttggattttgtttcatctcagactttcatcccaattttagggattcat
ggtggatcctcaatgattatggcagacaaggatgaaatgtccactttcttccaatttgga
gcttctatcaagcagcaagccactgtcatgctgaatattatggaagaatatgattggcat
gtattttccgtcataacaagcaattttcctggatatcgagactttataagtttcattaag
accactgtggacaatagttttgttggctgggaagttcagaattatattactttggataca
tcatatacagatgcacaaacactaacacagctgaagaaaatccattcttctgttattctc
ctttattgttcaaaggatgaagcaacttacatttttgaggaggcccgttcccttggcctt
atgggatatggttttgtctggatcgtgcctagcctagtaacaggaaacacagatatgata
ccatatgagtttccatctggtttggtgtctgtgtcatatgacgactgggattatggtata
gaagctagagtgagggatggccttggaattataaccacagcagcatcagcaatgttggaa
aaacattcggtgattcctgaagcgaaaacaagttgttatggccagaatgaaagaaatgat
ccaccacttcatactcttcacaacttcatgataaatgtaacttgggatggcaaggatttg
tcctttacagaagatggatatcaagcaaatcccaaactagtggttttattgctgaatatg
gaaagagagtgggaaaaggtggggaaatgggagaataaaagcttaaacatgaagtatcca
gtgtggcccaggatcacagcttctttggacagtgaccatgatgacaaccatttaagcatt
gtcactttagaagaagctccatttgtgattgttgaaaatattgactacctgacaggaacg
tgcgtgagaaacactgtgccatgtagaaagtatttccggttaaataactcaacaactgaa
ggtacatcagtgaaaaaatgttgcaaaggattctgtatagatattttaaagaaactttca
aagactgtgaaattcacttatgacctttatctggttactaatgggaagcatgggaaaaaa
atcaagaatgtttggaatggaatgattggtgaagtggtttataaacgagcagttatggcc
gtgggttcactcacaattaatgaagagcgttcagtagcagttgatttctcagttccattt
gttgagactggaattagtgttatggtatcacgtagcaatggcaccgtttctccatcagct
tttttagaaccgtttagtgcttctgtctgggtgatgatgtttgtgatgcttctccttgtg
tctgcaatggctgttttcatatttgagtactttagcccagtaggctataacaggaactta
gcacaagggaaagatccgcatggaccttctttcacaattggaaaagctgtatggctgctg
tggggtttggtcttcaataattcagtacctgtgcaaaatccaaagggcacaaccagcaaa
atcatagtgtcaatttgggctttttttgctgtgatatttttggcaagctacactgctaac
ttggctgcatttatgattcaagaagaatttgttgatcaggttactggacttagtgataat
aagtttcaaaggcctcatgattattctcctccatttcgctttggcacggttccaaatggc
agcactgaaagaaatattagaaataattatcctgatatgcatcaatacatggttaaattt
catcaaaaaggagtgcaagatgctttagtcagcttaaagactggtaagctggatgcattt
atctatgatgcagcagtgctgaattacatggctggaagggatgaaggctgtaagctggtg
acaattggcagtggctatatctttgctactactggctatggtatagctctccagaaggtt
tcaagatggaaacgtcctattgatttagctcttctacagtttgttggagacggtgaaatg
gaagaattagaaaaattgtggttaactggaatctgccatactgagaaaaatgaagtcatg
agtagccagctagatatcgacaacatggcgggagtattctacatgcttgcagcagctatg
gctttgagtctcataacctttgtatgggaacatctgttttactggaaactacgcttctgt
tttacaggagtctgtactggcacaccagggctgcttttctcaattagcaggggcatttac
agttgtattcatggagtccacatagaagaaaagaaaaaatctcctgatttcagttttaca
gcgtctcaaacaaatatgttgaaactactgagagcatccaaaaatatagcaaatttatcc
aatttaaatcaatcccagtgcaattcgcccaaaagaacatctgattacattcaaagaaat
tcattattaactgacatggttttagataaaggcaatttaacatactcagacaacaggcca
tttcaacaaaaagatatatatagtgaaaatacatatgatcttgccatgttatctgctaat
tgccccaaagacagccttaacaactatgtttttcagggtcagcacccacttactcttaat
gaatctaatccaaacacagttgaggttgctgtaagtgcagaagcgaaagtaaacaccaga
cctagacaactttggaagaaatcagtagaaaccttacgacaaacccagggttcagtaaat
gaaaatggtacagaagaatcaaagtcatccattaaaaatcagcgctttcttccagaggat
ggtcatttttctgatgtttcagaggcatcaagtagagccacatgtcatatagattctgaa
aacaataataaacatcgtaaaagtaaggacaacttaaaaaagcgaccagtgtctgccaaa
tatgccagagaatgcagtgaggttgaactgtcatatctgaaaatcaaacatgggcctaat
cgtgacaaggtttacacaattgatggagataaggagccaagctttataatggaccagcct
aaatatagtgaaaattcccctgaccaagatgatgaagattatcctgatgtgtaccaagat
cacaatgataattataggaaaacagaacctctacagtcagatagaactcctttgcatagt
gaaggtagacttccaaataatgacatacagtacaaattattttcaaagcactacaatttg
aaagaaaagaatacatctatgtctgatgccaatgatagacataggcaaaattccactcac
tgcagaagttgcctttctaatatgcccaactatactggccattacacagcacgatcccca
tacaagtgtgatgactgccttcatacagggaaactttatgatattgatgaagatcaaatg
ctgcatgaggcagccaactctatgcattctgaagatttttatgagcacaactggcttgaa
aataatgctctacactttcagaaaaaaaacaagttaagaattaacaggcagcattcatgt
gacaacattaataaacccagggaacatgatcttggaagacccccacgtagtttaagtttg
aaggagaaagaaaggtatatacaagaaaatccatttgctaaatttgttattgtcccacct
gaaaaactgttggggaacaatgcttcactttttacagactctttaaaggacagtaagaga
agcaagtctctttatcctgataactcctccgataaccctttcctgcattcttatcaggag
actcaaaaactaagtcatggaagaagttcttcagacatttataaacaatcttccttaccg
aaagcaagaaatgataactatttaaggtcatctattaaatctactacttcatattcttca
agggacggacgggtacccgacgacatgtgtgtttctgaatatgctctgccttatgttaca
agcaacaatagtgtgtactcagctccacggggtgtgaattcctgcagcaatagacgtgta
tttaagaaaatgccgagccttgagtctgatgtttaa
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